Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

PYP-like sensor domain (PAS domain) View domain combination »

EAL domain-like View domain combination »

Nucleotide cyclase View domain combination »

Genome Number
Phytophthora capsici 0
Genome Number
Thermobaculum terrenum ATCC BAA-798 1
Leptolyngbya sp. PCC 7376 0
Synechococcus sp. PCC 7502 1
Synechococcus elongatus PCC 7942 1
Gloeocapsa sp. PCC 7428 1
Conexibacter woesei DSM 14684 3
Ilumatobacter coccineus 2
Nakamurella multipartita DSM 44233 1
Kineococcus radiotolerans SRS30216 1
Catenulispora acidiphila DSM 44928 2
Cellulomonas flavigena DSM 20109 1
Cellulomonas fimi ATCC 484 1
Anaerolinea thermophila UNI-1 1
Roseiflexus sp. RS-1 0
Roseiflexus castenholzii DSM 13941 0
Deinococcus radiodurans R1 1
Symbiobacterium thermophilum IAM 14863 1
Clostridium clariflavum DSM 19732 1
Thermincola potens JR 1
Desulfosporosinus acidiphilus SJ4 1
Desulfosporosinus orientis DSM 765 1
Desulfotomaculum acetoxidans DSM 771 1
Paenibacillus mucilaginosus 3016 2
Solibacillus silvestris StLB046 1
Bacillus sp. 1NLA3E 1
Bacillus megaterium DSM 319 1
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1
Sphaerochaeta pleomorpha str. Grapes 0
Spirochaeta thermophila DSM 6192 1
Denitrovibrio acetiphilus DSM 12809 0
Flexistipes sinusarabici DSM 4947 1
Fervidobacterium nodosum Rt17-B1 1
Terriglobus saanensis SP1PR4 2
Leptospirillum ferrooxidans C2-3 1
Nitratifractor salsuginis DSM 16511 1
Arcobacter sp. L 0
Arcobacter nitrofigilis DSM 7299 1
Campylobacter curvus 525.92 0
uncultured Sulfuricurvum sp. RIFRC-1 2
Sulfuricurvum kujiense DSM 16994 1
Sulfurimonas autotrophica DSM 16294 2
Sulfurimonas denitrificans DSM 1251 2
Wolinella succinogenes DSM 1740 1
Sulfurovum sp. NBC37-1 1
Desulfobulbus propionicus DSM 2032 2
Desulfobacterium autotrophicum HRM2 1
Desulfomicrobium baculatum DSM 4028 1
Desulfovibrio magneticus RS-1 1
Desulfovibrio alaskensis G20 1
Desulfovibrio salexigens DSM 2638 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1
Desulfovibrio africanus str. Walvis Bay 2
Geobacter lovleyi SZ 1
Geobacter sulfurreducens KN400 1
Pelobacter propionicus DSM 2379 0
Pelobacter carbinolicus DSM 2380 1
Dechloromonas aromatica RCB 4
Thauera sp. MZ1T 1
Azoarcus sp. KH32C 6
Azoarcus sp. BH72 1
Aromatoleum aromaticum EbN1 3
Dechlorosoma suillum PS 3
Pseudogulbenkiania sp. NH8B 2
Laribacter hongkongensis HLHK9 1
Chromobacterium violaceum ATCC 12472 1
Candidatus Accumulibacter phosphatis clade IIA str. UW-1 0
beta proteobacterium CB 1
Methylibium petroleiphilum PM1 1
Thiomonas intermedia K12 1
Rubrivivax gelatinosus IL144 2
Leptothrix cholodnii SP-6 2
Burkholderia phytofirmans PsJN 1
Burkholderia phymatum STM815 2
Ralstonia eutropha JMP134 2
Cupriavidus taiwanensis LMG 19424 2
Cupriavidus necator N-1 2
Ralstonia eutropha H16 2
Burkholderia sp. RPE64 1
Burkholderia sp. CCGE1002 2
Burkholderia multivorans ATCC 17616 0
Burkholderia vietnamiensis G4 1
Verminephrobacter eiseniae EF01-2 3
Alicycliphilus denitrificans K601 1
Delftia sp. Cs1-4 2
Delftia acidovorans SPH-1 2
Variovorax paradoxus S110 1
Rhodoferax ferrireducens T118 3
Acidovorax ebreus TPSY 3
Acidovorax sp. KKS102 10
Acidovorax sp. JS42 3
Acidovorax citrulli AAC00-1 1
Acidovorax avenae subsp. avenae ATCC 19860 1
Comamonas testosteroni CNB-2 1
Herminiimonas arsenicoxydans 2
Collimonas fungivorans Ter331 1
Janthinobacterium sp. Marseille 1
Herbaspirillum seropedicae SmR1 1
Thiobacillus denitrificans ATCC 25259 1
Nitrosospira multiformis ATCC 25196 3
Sideroxydans lithotrophicus ES-1 4
Gallionella capsiferriformans ES-2 2
Methylotenera versatilis 301 3
Methylotenera mobilis JLW8 3
Methylovorus sp. MP688 1
Methylovorus glucosetrophus SIP3-4 2
Magnetococcus marinus MC-1 1
Asticcacaulis excentricus CB 48 1
Sphingobium japonicum UT26S 1
Sphingobium chlorophenolicum L-1 1
Rhodobacter capsulatus SB 1003 4
Rhodospirillum photometricum DSM 122 1
Magnetospirillum magneticum AMB-1 1
Rhodospirillum centenum SW 1
Azospirillum lipoferum 4B 2
Azospirillum sp. B510 2
Azospirillum brasilense Sp245 1
Polymorphum gilvum SL003B-26A1 0
Xanthobacter autotrophicus Py2 1
Methylobacterium radiotolerans JCM 2831 2
Sinorhizobium fredii NGR234 1
Rhizobium etli CIAT 652 2
Rhizobium leguminosarum bv. viciae 3841 2
Agrobacterium vitis S4 1
Mesorhizobium opportunistum WSM2075 1
Mesorhizobium ciceri biovar biserrulae WSM1271 1
Mesorhizobium loti MAFF303099 1
Hyphomicrobium sp. MC1 3
Hyphomicrobium denitrificans ATCC 51888 1
Oligotropha carboxidovorans OM4 1
Rhodopseudomonas palustris BisA53 1
Bradyrhizobium japonicum USDA 110 2
Bradyrhizobium sp. ORS 278 2
Saccharophagus degradans 2-40 2
Teredinibacter turnerae T7901 1
Cellvibrio japonicus Ueda107 1
Oceanimonas sp. GK1 3
Tolumonas auensis DSM 9187 1
Vibrio sp. Ex25 2
Vibrio harveyi ATCC BAA-1116 1
Vibrio parahaemolyticus RIMD 2210633 2
Vibrio splendidus LGP32 1
Vibrio furnissii NCTC 11218 1
Vibrio vulnificus MO6-24/O 1
Vibrio cholerae O395 1
Photobacterium profundum SS9 1
Psychromonas ingrahamii 37 5
Ferrimonas balearica DSM 9799 0
Shewanella piezotolerans WP3 1
Shewanella loihica PV-4 1
Shewanella halifaxensis HAW-EB4 1
Shewanella sediminis HAW-EB3 1
Shewanella denitrificans OS217 1
Shewanella pealeana ATCC 700345 1
Shewanella oneidensis MR-1 1
Shewanella baltica OS185 2
Shewanella woodyi ATCC 51908 0
Shewanella sp. MR-4 2
Shewanella amazonensis SB2B 1
Shewanella violacea DSS12 0
Shewanella frigidimarina NCIMB 400 1
Shewanella putrefaciens CN-32 1
Pseudoalteromonas sp. SM9913 2
Pseudoalteromonas atlantica T6c 0
Pseudoalteromonas haloplanktis TAC125 1
Glaciecola sp. 4H-3-7+YE-5 0
Glaciecola nitratireducens FR1064 1
Marinobacter adhaerens HP15 1
Marinobacter sp. BSs20148 2
Marinobacter aquaeolei VT8 0
Alteromonas sp. SN2 3
Alteromonas macleodii str. 'Deep ecotype' 2
Kangiella koreensis DSM 16069 1
Hahella chejuensis KCTC 2396 1
Alcanivorax borkumensis SK2 1
Marinomonas posidonica IVIA-Po-181 1
Marinomonas sp. MWYL1 1
Marinomonas mediterranea MMB-1 3
Methylomicrobium alcaliphilum 5
Methylomonas methanica MC09 2
Methylococcus capsulatus str. Bath 1
Rhodanobacter denitrificans 1
Frateuria aurantia DSM 6220 1
Pseudoxanthomonas spadix BD-a59 2
Stenotrophomonas maltophilia K279a 1
Xanthomonas albilineans GPE PC73 2
Alkalilimnicola ehrlichii MLHE-1 2
Thioalkalivibrio sulfidophilus HL-EbGr7 2
Thioalkalivibrio sp. K90mix 1
Halorhodospira halophila SL1 2
Thiocystis violascens DSM 198 2
Nitrosococcus watsonii C-113 1
Nitrosococcus halophilus Nc4 1
Legionella longbeachae NSW150 2
Legionella pneumophila str. Corby 1
gamma proteobacterium HdN1 1
Edwardsiella ictaluri 93-146 1
Edwardsiella tarda EIB202 1
Salmonella bongori NCTC 12419 1
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 1
Citrobacter rodentium ICC168 1
Azotobacter vinelandii DJ 1
Pseudomonas sp. TKP 1
Pseudomonas sp. UW4 1
Pseudomonas brassicacearum subsp. brassicacearum NFM421 1
Pseudomonas entomophila L48 1
Pseudomonas stutzeri A1501 2
Pseudomonas fulva 12-X 1
Pseudomonas protegens Pf-5 1
Pseudomonas fluorescens SBW25 1
Pseudomonas mendocina ymp 2
Pseudomonas aeruginosa UCBPP-PA14 2
Acinetobacter oleivorans DR1 1
Acinetobacter calcoaceticus PHEA-2 1
Acinetobacter baumannii ATCC 17978 1
Methylophaga sp. JAM1 1
Cycloclasticus sp. P1 1
Genome Number
Genome Number
Chroococcidiopsis thermalis PCC 7203 1
Cyanobium gracile PCC 6307 1
Synechococcus elongatus PCC 6301 1
Oscillatoria nigro-viridis PCC 7112 0
Oscillatoria acuminata PCC 6304 2
Cyanothece sp. PCC 7822 1
Cyanothece sp. PCC 7424 3
Desulfosporosinus meridiei DSM 13257 1
Desulfotomaculum gibsoniae DSM 7213 1
Thermobacillus composti KWC4 0
Paenibacillus mucilaginosus KNP414 2
Paenibacillus mucilaginosus K02 2
Bacillus infantis NRRL B-14911 1
Bacillus megaterium WSH-002 1
Bacillus megaterium QM B1551 1
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1
Desulfovibrio hydrothermalis AM13 = DSM 14728 2
Desulfovibrio vulgaris str. 'Miyazaki F' 1
Desulfovibrio gigas DSM 1382 = ATCC 19364 2
Geobacter sulfurreducens PCA 1
Burkholderia phenoliruptrix BR3459a 1
Burkholderia sp. YI23 1
Burkholderia sp. CCGE1001 1
Burkholderia sp. KJ006 1
Burkholderia multivorans ATCC 17616 0
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 3
Alicycliphilus denitrificans BC 1
Sulfuricella denitrificans skB26 2
Octadecabacter antarcticus 307 1
Rhodobacter sphaeroides ATCC 17025 1
Magnetospirillum gryphiswaldense MSR-1 v2 2
Sinorhizobium fredii USDA 257 1
Sinorhizobium fredii HH103 1
Rhizobium etli CFN 42 1
Rhizobium etli bv. mimosae str. Mim1 1
Rhizobium leguminosarum bv. trifolii WSM2304 2
Rhizobium leguminosarum bv. trifolii WSM1325 2
Mesorhizobium australicum WSM2073 1
Hyphomicrobium nitrativorans NL23 1
Hyphomicrobium denitrificans 1NES1 2
Oligotropha carboxidovorans OM5 1
Oligotropha carboxidovorans OM5 1
Rhodopseudomonas palustris DX-1 1
Rhodopseudomonas palustris TIE-1 1
Rhodopseudomonas palustris HaA2 1
Rhodopseudomonas palustris BisB5 1
Rhodopseudomonas palustris BisB18 1
Rhodopseudomonas palustris CGA009 1
Bradyrhizobium sp. S23321 2
Bradyrhizobium sp. BTAi1 2
Bradyrhizobium oligotrophicum S58 2
Bradyrhizobium japonicum USDA 6 2
Simiduia agarivorans SA1 = DSM 21679 1
Vibrio sp. EJY3 1
Vibrio parahaemolyticus BB22OP 1
Vibrio alginolyticus NBRC 15630 = ATCC 17749 2
Vibrio nigripulchritudo VibrioScope 1
Vibrio vulnificus CMCP6 1
Vibrio vulnificus YJ016 1
Vibrio cholerae M66-2 1
Vibrio cholerae O395 1
Vibrio cholerae IEC224 1
Vibrio cholerae O1 str. 2010EL-1786 1
Vibrio cholerae MJ-1236 1
Vibrio cholerae O1 biovar El Tor str. N16961 1
Shewanella sp. W3-18-1 1
Shewanella sp. ANA-3 1
Shewanella baltica BA175 2
Shewanella baltica OS678 2
Shewanella baltica OS117 2
Shewanella baltica OS223 2
Shewanella baltica OS195 2
Shewanella baltica OS155 1
Shewanella sp. MR-7 2
Shewanella putrefaciens 200 0
Glaciecola psychrophila 170 0
Alteromonas macleodii str. 'Ionian Sea UM4b' 2
Alteromonas macleodii str. 'Ionian Sea UM7' 2
Alteromonas macleodii str. 'Ionian Sea U8' 3
Alteromonas macleodii str. 'Ionian Sea U7' 2
Alteromonas macleodii str. 'Ionian Sea U4' 3
Alteromonas macleodii str. 'Aegean Sea MED64' 2
Alteromonas macleodii str. 'English Channel 615' 1
Alteromonas macleodii AltDE1 2
Alteromonas macleodii str. 'English Channel 673' 1
Alteromonas macleodii str. 'Balearic Sea AD45' 3
Alteromonas macleodii str. 'Black Sea 11' 1
Alteromonas macleodii ATCC 27126 1
Alcanivorax dieselolei B5 1
Thalassolituus oleivorans MIL-1 1
Stenotrophomonas maltophilia D457 1
Stenotrophomonas maltophilia JV3 1
Stenotrophomonas maltophilia R551-3 1
Thioalkalivibrio nitratireducens DSM 14787 3
Thioflavicoccus mobilis 8321 2
Legionella pneumophila str. Paris 1
Legionella pneumophila str. Lens 1
Legionella pneumophila subsp. pneumophila LPE509 1
Legionella pneumophila subsp. pneumophila str. Thunder Bay 1
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 1
Legionella pneumophila subsp. pneumophila 1
Legionella pneumophila subsp. pneumophila 1
Legionella pneumophila subsp. pneumophila ATCC 43290 1
Legionella pneumophila 2300/99 Alcoy 1
Edwardsiella tarda C07-087 1
Edwardsiella tarda FL6-60 1
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 1
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 1
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 1
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 1
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 1
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 1
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 1
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 1
Salmonella enterica subsp. enterica serovar Newport str. SL254 1
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 1
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 1
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 1
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 1
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 1
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 1
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 1
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 1
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 1
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 1
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 1
Salmonella enterica subsp. enterica serovar Typhi str. CT18 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 1
Salmonella enterica serovar Bovismorbificans genomics 1
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 1
Salmonella enterica subsp. enterica serovar Agona str. 24249 1
Salmonella enterica subsp. enterica serovar Agona str. SL483 1
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 1
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 1
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 1
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 1
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 1
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 1
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 1
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 1
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 1
Azotobacter vinelandii CA6 1
Azotobacter vinelandii CA 1
Pseudomonas denitrificans ATCC 13867 2
Pseudomonas stutzeri CCUG 29243 2
Pseudomonas stutzeri DSM 10701 1
Pseudomonas stutzeri DSM 4166 2
Pseudomonas stutzeri RCH2 3
Pseudomonas stutzeri ATCC 17588 = LMG 11199 3
Pseudomonas protegens CHA0 1
Pseudomonas poae RE*1-1-14 1
Pseudomonas fluorescens F113 1
Pseudomonas fluorescens A506 1
Pseudomonas fluorescens R124 1
Pseudomonas fluorescens Pf0-1 1
Pseudomonas resinovorans NBRC 106553 1
Pseudomonas mendocina NK-01 2
Pseudomonas aeruginosa SCV20265 2
Pseudomonas aeruginosa MTB-1 2
Pseudomonas aeruginosa LES431 2
Pseudomonas aeruginosa RP73 2
Pseudomonas aeruginosa B136-33 2
Pseudomonas aeruginosa PA1R 2
Pseudomonas aeruginosa PA1 2
Pseudomonas aeruginosa DK2 2
Pseudomonas aeruginosa NCGM2.S1 2
Pseudomonas aeruginosa M18 2
Pseudomonas aeruginosa LESB58 2
Pseudomonas aeruginosa PA7 2
Pseudomonas aeruginosa PAO1 2
Acinetobacter genomosp. 13TU RUH2624 1
Acinetobacter sp. SH024 1
Acinetobacter calcoaceticus ruh2202 1
Acinetobacter baumannii ZW85-1 1
Acinetobacter baumannii TYTH-1 1
Acinetobacter baumannii BJAB0868 1
Acinetobacter baumannii BJAB0715 1
Acinetobacter baumannii BJAB07104 1
Acinetobacter baumannii TCDC-AB0715 1
Acinetobacter baumannii D1279779 1
Acinetobacter baumannii MDR-TJ 1
Acinetobacter baumannii 1656-2 1
Acinetobacter baumannii ATCC 19606 1
Acinetobacter baumannii AB307-0294 1
Acinetobacter baumannii AYE 1
Acinetobacter baumannii SDF 1
Acinetobacter baumannii MDR-ZJ06 1
Acinetobacter baumannii AB0057 1
Acinetobacter baumannii ACICU 1
Acinetobacter junii SH205 1
Acinetobacter johnsonii SH046 1
Acinetobacter lwoffii SH145 1
Methylophaga sp. JAM7 1
Cycloclasticus zancles 7-ME 1
Genome Number
Genome Number