Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

HIT-like View domain combination »

Genome Number
Homo sapiens 76_38 5
Pan troglodytes 76_2.1.4 0
Gorilla gorilla 76_3.1 0
Pongo abelii 76_2 0
Tarsius syrichta 76_1 1
Nomascus leucogenys 76_1.0 0
Papio anubis 76 1
Macaca mulatta 76_1 2
Callithrix jacchus 76_3.2.1 0
Otolemur garnettii 76_3 0
Microcebus murinus 76_1 0
Physcomitrella patens subsp. patens 22 3
Rattus norvegicus 76_5.0 0
Mus musculus 76_38 2
Ictidomys tridecemlineatus 76_2 0
Heterocephalus glaber v1.7-2 0
Cavia porcellus 76_3 0
Oryctolagus cuniculus 76_2 1
Ochotona princeps 76 0
Tupaia belangeri 76 0
Sus scrofa 76_10.2 0
Bos taurus 76_3.1 0
Ovis aries 76_3.1 0
Vicugna pacos 76_1 0
Tursiops truncatus 76_1 0
Mustela putorius furo 76_1.0 0
Ailuropoda melanoleuca 76_1 0
Canis familiaris 76_3.1 0
Equus caballus 76_2 0
Myotis lucifugus 76_2.0 0
Pteropus vampyrus 76_1 0
Sorex araneus 76_1 1
Erinaceus europaeus 76 0
Procavia capensis 76_1 0
Loxodonta africana 76_3 0
Echinops telfairi 76 1
Dasypus novemcinctus 76_2 0
Choloepus hoffmanni 76_1 0
Macropus eugenii 76_1.0 0
Sarcophilus harrisii 76_7.0 0
Monodelphis domestica 76_5 0
Ornithorhynchus anatinus 76_5 1
Saccoglossus kowalevskii v3.0 2
Petromyzon marinus 76_7.0 0
Meleagris gallopavo 76_2 1
Gallus gallus 76_4 0
Anas platyrhynchos 76_1.0 1
Ficedula albicollis 76_1.0 0
Pelodiscus sinensis 76_1.0 0
Anolis carolinensis 76_2.0 0
Xenopus laevis 2
Xenopus tropicalis 76_4.2 1
Latimeria chalumnae 76_1 0
Lepisosteus oculatus 76 0
Gadus morhua 76_1 2
Tetraodon nigroviridis 76_8 1
Takifugu rubripes 76_4 0
Gasterosteus aculeatus 76_1 1
Oryzias latipes 76_1 1
Xiphophorus maculatus 76_4.4.2 1
Poecilia formosa 76 1
Oreochromis niloticus 76_1.0 0
Astyanax mexicanus 76 1
Danio rerio 76_9 0
Oikopleura dioica 0
Ciona savignyi 76_2.0 0
Ciona intestinalis 76 0
Strongylocentrotus purpuratus v3.1 0
Adineta vaga 1
Octopus bimaculoides 280 0
Crassostrea gigas 22 1
Lottia gigantea 0
Helobdella robusta 0
Capitella sp. I 0
Danaus plexippus OGS1.0 0
Heliconius melpomene 1
Bombyx mori 1
Apis mellifera 38.2d 1
Harpegnathos saltator v3.3 0
Pogonomyrmex barbatus v1.2 0
Solenopsis invicta v.2.2.3 0
Acromyrmex echinatior v3.8 0
Atta cephalotes v1.1 0
Camponotus floridanus v3.3 0
Lucilia cuprina 0
Drosophila grimshawi 1.3 0
Drosophila willistoni 1.3 0
Drosophila pseudoobscura 2.13 0
Drosophila persimilis 1.3 0
Drosophila suzukii 0
Drosophila yakuba 1.3 0
Drosophila simulans 1.3 0
Drosophila sechellia 1.3 1
Drosophila melanogaster 76_5 0
Drosophila erecta 1.3 0
Drosophila ananassae 1.3 0
Drosophila virilis 1.2 0
Drosophila mojavensis 1.3 0
Aedes aegypti 55 1
Culex pipiens quinquefasciatus 0
Anopheles darlingi 22 0
Anopheles gambiae 49_3j 0
Tribolium castaneum 3.0 0
Pediculus humanus corporis 0
Acyrthosiphon pisum 0
Rhodnius prolixus 22 1
Daphnia pulex 0
Strigamia maritima 22 0
Sarcoptes scabiei 0
Tetranychus urticae 1
Ixodes scapularis 1
Meloidogyne incognita 2
Meloidogyne hapla 0
Onchocerca volvulus 22 0
Brugia malayi WS250 0
Caenorhabditis brenneri 0
Caenorhabditis remanei 0
Caenorhabditis elegans 76_235 0
Caenorhabditis briggsae 2 0
Trichinella spiralis 22 0
Hymenolepis microstoma 0
Echinococcus multilocularis 0
Echinococcus granulosus 0
Taenia solium 0
Schistosoma mansoni 0
Mnemiopsis leidyi 0
Thelohanellus kitauei 2
Acropora digitifera v1.0 0
Nematostella vectensis 1.0 0
Hydra vulgaris 1
Amphimedon queenslandica 1
Proterospongia sp. ATCC 50818 0
Monosiga brevicollis 1
Conidiobolus coronatus NRRL28638 v1.0 0
Mortierella verticillata NRRL 6337 0
Phycomyces blakesleeanus 0
Rhizopus oryzae RA 99-880 0
Rhizomucor miehei CAU432 0
Malassezia globosa CBS 7966 4
Ustilago maydis 1
Cronartium quercuum f. sp. fusiforme G11 v1.0 0
Puccinia graminis f. sp. tritici CRL 75-36-700-3 0
Melampsora laricis-populina 0
Rhodotorula graminis WP1 v1.0 2
Sporobolomyces roseus IAM 13481 1
Microbotryum violaceum 22 3
Wallemia sebi v1.0 0
Sphaerobolus stellatus v1.0 0
Piloderma croceum F 1598 v1.0 0
Serpula lacrymans var. lacrymans S7.9 0
Coniophora puteana 0
Hydnomerulius pinastri v2.0 0
Paxillus rubicundulus Ve08.2h10 v1.0 0
Pisolithus microcarpus 441 v1.0 0
Pisolithus tinctorius Marx 270 v1.0 0
Scleroderma citrinum Foug A v1.0 0
Coprinopsis cinerea okayama7 130 v3 0
Pleurotus ostreatus 4
Amanita muscaria Koide v1.0 0
Galerina marginata v1.0 0
Hebeloma cylindrosporum h7 v2.0 0
Agaricus bisporus var. bisporus 0
Schizophyllum commune 0
Stereum hirsutum FP-91666 SS1 v1.0 1
Heterobasidion annosum 0
Gloeophyllum trabeumv1.0 0
Punctularia strigosozonata v1.0 0
Sebacina vermifera MAFF 305830 v1.0 0
Tulasnella calospora AL13/4D v1.0 1
Postia placenta 0
Wolfiporia cocos MD-104 SS10 v1.0 0
Fomitopsis pinicolav1.0 0
Fomitopsis pinicola FP-58527 SS1 v3.0 0
Phanerochaete chrysosporium RP-78 2.1 1
Dichomitus squalens 1
Tremella mesenterica 0
Daldinia eschscholzii EC12 v1.0 2
Apiospora montagnei NRRL 25634 v1.0 2
Magnaporthe poae ATCC 64411 22 0
Magnaporthe grisea 70-15 0
Podospora anserina 0
Sporotrichum thermophile ATCC 42464 2
Thielavia terrestris NRRL 8126 1
Chaetomium globosum CBS 148.51 0
Neurospora tetrasperma 0
Neurospora discreta FGSC 8579 0
Neurospora crassa OR74A 1
Cryphonectria parasitica 0
Verticillium albo-atrum VaMs.102 0
Verticillium dahliae VdLs.17 0
Acremonium alcalophilumv 1.0 1
Glomerella graminicola 22 0
Fusarium oxysporum f. sp. lycopersici 4286 0
Fusarium verticillioides 7600 0
Trichoderma asperellum CBS 433.97 v1.0 1
Trichoderma atroviride 0
Trichoderma citrinoviride v1.0 1
Trichoderma reesei 1.2 1
Trichoderma virens Gv29-8 1
Trichoderma longibrachiatum ATCC 18648 v1.0 2
Trichoderma harzianum CBS 226.95 v1.0 2
Amorphotheca resinae v1.0 0
Botrytis cinerea B05.10 2
Sclerotinia sclerotiorum 0
Blumeria graminis 22 0
Didymella exigua CBS 183.55 v1.0 0
Leptosphaeria maculans 22 0
Setosphaeria turcica v1.0 0
Cochliobolus miyabeanus ATCC 44560 v1.0 0
Cochliobolus victoriae FI3 v1.0 0
Cochliobolus carbonum 26-R-13 v1.0 0
Cochliobolus heterostrophus 0
Alternaria brassicicola 1
Cochliobolus lunatus m118 v2.0 1
Pyrenophora teres f. teres 22 1
Pyrenophora tritici-repentis 2
Stagonospora nodorum 1
Mycosphaerella graminicola IPO323 0
Microsporum gypseum 0
Zasmidium cellare ATCC 36951 v1.0 0
Dothistroma septosporum 0
Septoria musiva v1.0 0
Mycosphaerella fijiensis CIRAD86 0
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 0
Paracoccidioides brasiliensis Pb18 0
Coccidioides posadasii RMSCC 3488 0
Coccidioides immitis RS 0
Ajellomyces dermatitidis SLH14081 0
Histoplasma capsulatum class NAmI strain WU24 0
Microsporum canis CBS 113480 0
Trichophyton equinum CBS 127.97 0
Trichophyton verrucosum HKI 0517 0
Arthroderma benhamiae CBS 112371 0
Trichophyton tonsurans CBS 112818 0
Trichophyton rubrum CBS 118892 0
Uncinocarpus reesii 1704 0
Penicillium chrysogenum Wisconsin 54-1255 0
Penicillium chrysogenum v1.0 0
Aspergillus acidus v1.0 1
Aspergillus fumigatus Af293 0
Aspergillus brasiliensis v1.0 2
Aspergillus nidulans FGSC A4 0
Aspergillus sydowii v1.0 0
Aspergillus versicolor v1.0 0
Aspergillus glaucus 0
Aspergillus carbonarius ITEM 5010 1
Neosartorya fischeri NRRL 181 0
Aspergillus terreus NIH2624 0
Aspergillus tubingensis v1.0 2
Aspergillus wentii v1.0 0
Aspergillus oryzae RIB40 0
Aspergillus niger 22 2
Aspergillus niger ATCC 1015 0
Aspergillus flavus NRRL3357 0
Aspergillus clavatus NRRL 1 0
Penicillium marneffei ATCC 18224 0
Tuber melanosporum Mel28 22 0
Tuber melanosporum Vittad 0
Dekkera bruxellensis CBS 2499 v2.0 0
Candida albicans SC5314 0
Lodderomyces elongisporus NRRL YB-4239 0
Wickerhamomyces anomalus 0
Yarrowia lipolytica CLIB122 0
Vanderwaltozyma polyspora DSM 70294 0
Candida glabrata CBS138 0
Kluyveromyces thermotolerans CBS 6340 0
Lachancea kluyveri 0
Kluyveromyces waltii 0
Ashbya gossypii ATCC 10895 0
Zygosaccharomyces rouxii 0
Saccharomyces mikatae MIT 0
Saccharomyces paradoxus MIT 0
Saccharomyces cerevisiae 76 0
Saccharomyces bayanus MIT 0
Kluyveromyces lactis 0
Schizosaccharomyces cryophilus OY26 22 0
Schizosaccharomyces octosporus yFS286 0
Schizosaccharomyces japonicus yFS275 0
Schizosaccharomyces pombe 0
Catenaria anguillulae PL171 v1.0 0
Allomyces macrogynus ATCC 38327 1
Spizellomyces punctatus DAOM BR117 1
Dictyostelium discoideum 1
Dictyostelium purpureum 0
Entamoeba dispar 1.2 1
Entamoeba invadens 1.2 1
Entamoeba histolytica 1 1
Selaginella moellendorffii 1
Pinus taeda 1
Picea abies 1
Eucalyptus grandis v201 4
Theobroma cacao B97-61/B2 v1 1
Gossypium raimondii v221 2
Citrus clementina v165 1
Citrus sinensis v154 2
Thellungiella halophila v173 1
Brassica rapa Chiifu-401 1.2 2
Capsella rubella v183 2
Arabidopsis lyrata 1
Arabidopsis thaliana 10 1
Carica papaya 1
Medicago truncatula 1
Phaseolus vulgaris v186 0
Glycine max v109 0
Cucumis sativus v122 3
Fragaria vesca 4
Malus domestica v196 5
Prunus persica v139 0
Linum usitatissimum v200 2
Manihot esculenta v147 0
Populus trichocarpa v156 1
Vitis vinifera 1
Mimulus guttatus v140 1
Solanum lycopersicum v.2.3 0
Actinidia chinensis Hongyang 0
Aquilegia coerulea v195 0
Triticum urartu 22 0
Triticum aestivum 22 4
Aegilops tauschii 22 0
Brachypodium distachyon 1
Oryza barthii 22 2
Oryza meridionalis 22 5
Oryza glumaepatula 22 3
Oryza glaberrima 2
Oryza punctata 22 2
Oryza nivara 22 4
Oryza brachyantha 22 3
Oryza sativa ssp. japonica 5.0 3
Oryza sativa v193 3
Phyllostachys heterocyclavar. pubescens 1
Panicum virgatum v202 1
Setaria italica v164 1
Zea mays subsp. mays 1
Zea mays v181 1
Sorghum bicolor 2
Musa balbisiana 2
Musa acuminata 22 2
Amborella trichopoda 22 3
Coccomyxa subellipsoidea sp. C-169 v2 0
Asterochloris sp. Cgr/DA1pho v1.0 0
Chlorella variabilis sp. NC64A 1
Chlorella vulgaris 0
Volvox carteri f. nagariensis 0
Volvox carteri v199 0
Chlamydomonas reinhardtii 4.0 0
Ostreococcus sp. RCC809 0
Ostreococcus lucimarinus CCE9901 1
Ostreococcus tauri 1
Bathycoccus prasinos 2
Micromonas sp. RCC299 1
Micromonas pusilla CCMP1545 v3.0 1
Cyanidioschyzon merolae strain 10D 22 2
Cyanidioschyzon merolae 2
Thecamonas trahens ATCC 50062 0
Bigelowiella natans CCMP2755 22 0
Leishmania mexicana 2.4 1
Leishmania major strain Friedlin 1
Leishmania infantum JPCM5 2.4 1
Leishmania braziliensis MHOM/BR/75/M2904 2.4 1
Trypanosoma vivax 0
Trypanosoma cruzi strain CL Brener 2
Trypanosoma congolense 2.4 1
Trypanosoma brucei gambiense v4.1 1
Trypanosoma brucei TREU927 v4.1 1
Ectocarpus siliculosus 3
Aureococcus anophagefferens 1
Albugo laibachii 22 1
Pythium iwayamai DAOM BR242034 22 3
Pythium arrhenomanes ATCC 12531 22 1
Pythium ultimum v1.7-2 1
Pythium aphanidermatum DAOM BR444 22 1
Pythium irregulare DAOM BR486 22 2
Pythium vexans DAOM BR484 22 1
Phytophthora ramorum 1.1 1
Phytophthora sojae 1.1 1
Phytophthora infestans T30-4 0
Phytophthora capsici 1
Hyaloperonospora arabidopsidis 22 1
Phaeodactylum tricornutumCCAP 1055/1 1
Fragilariopsis cylindrus 4
Thalassiosira pseudonana CCMP1335 1
Perkinsus marinus ATCC 50983 2
Paramecium tetraurelia 0
Tetrahymena thermophila SB210 1 0
Ichthyophthirius multifiliis strain G5 0
Neospora caninum 0
Toxoplasma gondii VEG 2
Toxoplasma gondii ME49 2
Toxoplasma gondii GT1 2
Theileria annulata 1
Plasmodium falciparum 3D7 1
Plasmodium vivax SaI-1 7.0 1
Plasmodium knowlesi strain H 1
Plasmodium chabaudi 1
Plasmodium berghei ANKA 1
Symbiodinium minutum clade B1 v1.2 1
Naegleria gruberi 1
Guillardia theta CCMP2712 v1.0 2
Emiliania huxleyi CCMP1516 2
Genome Number
Rivularia sp. PCC 7116 0
Rubrobacter xylanophilus DSM 9941 0
Nakamurella multipartita DSM 44233 0
Acidothermus cellulolyticus 11B 1
Kineococcus radiotolerans SRS30216 0
Frankia sp. EAN1pec 1
Thermomonospora curvata DSM 43183 1
Streptosporangium roseum DSM 43021 1
Streptomyces avermitilis MA-4680 2
Nocardioides sp. JS614 1
Propionibacterium propionicum F0230a 0
Salinispora tropica CNB-440 0
Verrucosispora maris AB-18-032 1
Gordonia sp. KTR9 1
Gordonia polyisoprenivorans VH2 1
Rhodococcus equi 103S 0
Rhodococcus opacus B4 0
Mycobacterium massiliense str. GO 06 0
Mycobacterium sp. JLS 1
Mycobacterium canettii CIPT 140010059 1
Mycobacterium africanum GM041182 1
Mycobacterium tuberculosis KZN 1435 2
Mycobacterium tuberculosis 2
Mycobacterium bovis BCG str. Pasteur 1173P2 1
Mycobacterium ulcerans Agy99 1
Mycobacterium marinum M 1
Mycobacterium leprae Br4923 1
Corynebacterium resistens DSM 45100 0
Corynebacterium kroppenstedtii DSM 44385 0
Corynebacterium efficiens YS-314 1
Corynebacterium ulcerans 0102 0
Corynebacterium urealyticum DSM 7109 1
Corynebacterium jeikeium K411 0
Corynebacterium variabile DSM 44702 0
Corynebacterium glutamicum R 1
Sanguibacter keddieii DSM 10542 0
Beutenbergia cavernae DSM 12333 0
Jonesia denitrificans DSM 20603 0
Intrasporangium calvum DSM 43043 1
Cellulomonas flavigena DSM 20109 1
Cellulomonas fimi ATCC 484 1
[Cellvibrio] gilvus ATCC 13127 0
Micrococcus luteus NCTC 2665 0
Bifidobacterium longum subsp. longum JDM301 0
Bifidobacterium animalis subsp. lactis Bl-04 0
Bifidobacterium dentium Bd1 0
Bifidobacterium breve ACS-071-V-Sch8b 0
Bifidobacterium bifidum S17 0
Bifidobacterium adolescentis ATCC 15703 0
Mobiluncus curtisii ATCC 43063 0
Thermomicrobium roseum DSM 5159 0
Sphaerobacter thermophilus DSM 20745 0
Symbiobacterium thermophilum IAM 14863 1
Streptococcus intermedius JTH08 1
Melioribacter roseus P3M 0
Salinibacter ruber M8 0
Odoribacter splanchnicus DSM 20712 0
Waddlia chondrophila WSU 86-1044 1
Parachlamydia acanthamoebae UV-7 2
Simkania negevensis Z 1
Rhodopirellula baltica SH 1 0
Candidatus Solibacter usitatus Ellin6076 1
Granulicella mallensis MP5ACTX8 1
Terriglobus saanensis SP1PR4 0
Bdellovibrio bacteriovorus HD100 1
Helicobacter acinonychis str. Sheeba 1
Helicobacter pylori B38 1
Syntrophus aciditrophicus SB 0
Desulfurivibrio alkaliphilus AHT2 1
Desulfobacterium autotrophicum HRM2 1
Desulfovibrio magneticus RS-1 1
Geobacter daltonii FRC-32 1
Thauera sp. MZ1T 0
Chromobacterium violaceum ATCC 12472 1
Burkholderia phytofirmans PsJN 1
Burkholderia phymatum STM815 1
Burkholderia xenovorans LB400 1
Ralstonia eutropha JMP134 1
Cupriavidus metallidurans CH34 1
Cupriavidus necator N-1 1
Ralstonia eutropha H16 1
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 1
Burkholderia sp. RPE64 1
Burkholderia sp. CCGE1002 1
Burkholderia gladioli BSR3 1
Herbaspirillum seropedicae SmR1 1
Advenella kashmirensis WT001 1
Thiobacillus denitrificans ATCC 25259 0
Gluconacetobacter xylinus NBRC 3288 1
Gluconacetobacter diazotrophicus PAl 5 0
Gluconobacter oxydans 621H 1
Micavibrio aeruginosavorus ARL-13 1
Candidatus Puniceispirillum marinum IMCC1322 1
Methylobacterium sp. 4-46 1
Methylobacterium nodulans ORS 2060 2
Methylobacterium radiotolerans JCM 2831 2
Sinorhizobium fredii NGR234 1
Agrobacterium vitis S4 1
Methylocella silvestris BL2 1
Frateuria aurantia DSM 6220 1
Stenotrophomonas maltophilia K279a 1
Xanthomonas albilineans GPE PC73 0
Xanthomonas campestris pv. campestris str. B100 1
Edwardsiella ictaluri 93-146 1
Edwardsiella tarda EIB202 1
Rahnella sp. Y9602 1
Rahnella aquatilis CIP 78.65 = ATCC 33071 1
Yersinia pseudotuberculosis IP 31758 1
Yersinia pestis Pestoides F 1
Serratia sp. AS12 1
Serratia sp. ATCC 39006 1
Serratia plymuthica AS9 1
Serratia proteamaculans 568 1
Dickeya dadantii Ech703 1
Dickeya zeae Ech1591 1
Pectobacterium wasabiae WPP163 1
Pectobacterium sp. SCC3193 1
Pectobacterium atrosepticum SCRI1043 1
Pectobacterium carotovorum subsp. carotovorum PC1 1
Pantoea sp. At-9b 1
Pantoea vagans C9-1 2
Pantoea ananatis LMG 20103 2
Erwinia tasmaniensis Et1/99 1
Erwinia sp. Ejp617 1
Erwinia billingiae Eb661 1
Erwinia pyrifoliae Ep1/96 1
Erwinia amylovora ATCC 49946 1
Escherichia blattae DSM 4481 1
Cronobacter sakazakii ES15 1
Enterobacteriaceae bacterium strain FGI 57 1
Shigella sonnei Ss046 1
Shigella flexneri 5 str. 8401 1
Salmonella bongori NCTC 12419 1
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 1
Klebsiella oxytoca E718 1
Klebsiella variicola At-22 1
Klebsiella pneumoniae NTUH-K2044 1
Enterobacter aerogenes KCTC 2190 1
Escherichia fergusonii ATCC 35469 1
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 1
Enterobacter sp. R4-368 1
Enterobacter sp. 638 1
Enterobacter asburiae LF7a 1
Enterobacter cloacae subsp. dissolvens SDM 1
Citrobacter rodentium ICC168 1
Citrobacter koseri ATCC BAA-895 1
Pseudomonas aeruginosa UCBPP-PA14 1
Thermofilum sp. 1910b 0
Thermofilum pendens Hrk 5 0
Methanoculleus bourgensis MS2 0
Methanoculleus marisnigri JR1 0
Archaeoglobus veneficus SNP6 0
Methanothermobacter marburgensis str. Marburg 0
Methanothermobacter thermautotrophicus str. Delta H 0
Genome Number
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) 2
Drosophila melanogaster FlyBase 5.12 0
Anopheles gambiae VectorBase AgamP3.6 0
Ascaris suum Victoria/Ghent 1
Caenorhabditis elegans WormBase WS218 0
Cryptococcus neoformans var. grubii H99 0
Cryptococcus neoformans B-3501A 0
Cryptococcus neoformans JEC21 0
Paracoccidioides brasiliensis Pb01 0
Paracoccidioides brasiliensis Pb03 0
Coccidioides posadasii str. Silveira 0
Coccidioides immitis RMSCC 3703 0
Coccidioides immitis RMSCC 2394 0
Coccidioides immitis H538.4 0
Ajellomyces dermatitidis ER-3 0
Histoplasma capsulatum H143 0
Histoplasma capsulatum H88 0
Histoplasma capsulatum G186AR 0
Aspergillus fumigatus A1163 0
Candida albicans WO-1 0
Saccharomyces cerevisiae UC5 0
Saccharomyces cerevisiae FL100 0
Saccharomyces cerevisiae CLIB324 0
Saccharomyces cerevisiae CBS7960 0
Saccharomyces cerevisiae YJM269 0
Saccharomyces cerevisiae T7 0
Saccharomyces cerevisiae FostersO 0
Saccharomyces cerevisiae Vin13 1
Saccharomyces cerevisiae LalvinQA23 0
Saccharomyces cerevisiae AWRI796 0
Saccharomyces cerevisiae Sigma1278b 0
Saccharomyces cerevisiae W303 0
Saccharomyces cerevisiae JAY291 0
Saccharomyces cerevisiae YPS163 0
Saccharomyces cerevisiae M22 0
Saccharomyces cerevisiae CLIB215 0
Saccharomyces cerevisiae YJM789 0
Saccharomyces cerevisiae YJM789 0
Saccharomyces cerevisiae RM11-1a 0
Saccharomyces cerevisiae RM11-1a 0
Saccharomyces cerevisiae SGD 0
Schizosaccharomyces pombe 972h- 0
Batrachochytrium dendrobatidis JEL423 0
Batrachochytrium dendrobatidis JAM81 0
Theobroma cacao Matina 1-6 v0.9 3
Hordeum vulgare 22 0
Oryza sativa ssp. Indica 1
Trypanosoma brucei Lister 427 v4.1 1
Neospora caninum Nc-Liverpool 6.2 0
Genome Number
Chroococcidiopsis thermalis PCC 7203 0
Synechococcus sp. RCC307 1
Frankia sp. EuI1c 0
Propionibacterium acnes KPA171202 1
Propionibacterium acidipropionici ATCC 4875 0
Nocardia brasiliensis ATCC 700358 1
Mycobacterium liflandii 128FXT 1
Mycobacterium sp. KMS 1
Mycobacterium sp. MCS 1
Mycobacterium canettii CIPT 140070017 1
Mycobacterium canettii CIPT 140060008 1
Mycobacterium canettii CIPT 140070008 1
Mycobacterium canettii CIPT 140070010 1
Mycobacterium tuberculosis EAI5/NITR206 2
Mycobacterium tuberculosis EAI5 1
Mycobacterium tuberculosis CAS/NITR204 1
Mycobacterium tuberculosis str. Beijing/NITR203 2
Mycobacterium tuberculosis UT205 2
Mycobacterium tuberculosis RGTB423 1
Mycobacterium tuberculosis RGTB327 2
Mycobacterium tuberculosis CTRI-2 2
Mycobacterium tuberculosis str. Erdman = ATCC 35801 2
Mycobacterium tuberculosis KZN 605 2
Mycobacterium tuberculosis KZN 4207 2
Mycobacterium tuberculosis CCDC5180 2
Mycobacterium tuberculosis CCDC5079 2
Mycobacterium tuberculosis CCDC5079 2
Mycobacterium tuberculosis H37Ra 2
Mycobacterium tuberculosis str. Haarlem/NITR202 2
Mycobacterium tuberculosis str. Haarlem 2
Mycobacterium tuberculosis F11 1
Mycobacterium tuberculosis H37Rv 2
Mycobacterium tuberculosis CDC1551 1
Mycobacterium bovis AF2122/97 1
Mycobacterium bovis BCG str. Korea 1168P 1
Mycobacterium bovis BCG str. Mexico 1
Mycobacterium bovis BCG str. Tokyo 172 1
Mycobacterium leprae TN 1
Mycobacterium smegmatis JS623 1
Corynebacterium terpenotabidum Y-11 0
Corynebacterium ulcerans BR-AD22 0
Corynebacterium ulcerans 809 0
Corynebacterium urealyticum DSM 7111 1
Corynebacterium argentoratense DSM 44202 0
Corynebacterium callunae DSM 20147 1
Leifsonia xyli subsp. cynodontis DSM 46306 1
Gardnerella vaginalis HMP9231 0
Gardnerella vaginalis ATCC 14019 0
Bifidobacterium longum NCC2705 0
Bifidobacterium longum DJO10A 0
Bifidobacterium longum subsp. infantis 157F 0
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 0
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 0
Bifidobacterium longum subsp. longum KACC 91563 0
Bifidobacterium longum subsp. longum BBMN68 0
Bifidobacterium longum subsp. longum F8 0
Bifidobacterium longum subsp. longum JCM 1217 0
Bifidobacterium thermophilum RBL67 0
Bifidobacterium animalis subsp. animalis ATCC 25527 0
Bifidobacterium animalis subsp. lactis Bl12 0
Bifidobacterium animalis subsp. lactis B420 0
Bifidobacterium animalis subsp. lactis ATCC 27673 0
Bifidobacterium animalis subsp. lactis BLC1 0
Bifidobacterium animalis subsp. lactis CNCM I-2494 0
Bifidobacterium animalis subsp. lactis Bi-07 0
Bifidobacterium animalis subsp. lactis V9 0
Bifidobacterium animalis subsp. lactis DSM 10140 0
Bifidobacterium animalis subsp. lactis BB-12 0
Bifidobacterium animalis subsp. lactis AD011 0
Bifidobacterium breve UCC2003 0
Bifidobacterium asteroides PRL2011 0
Bifidobacterium bifidum PRL2010 0
Bifidobacterium bifidum BGN4 0
Actinomyces graevenitzii C83 0
Actinomyces viscosus C505 1
Desulfotomaculum gibsoniae DSM 7213 0
Streptococcus intermedius B196 1
Streptococcus intermedius C270 1
Bdellovibrio bacteriovorus str. Tiberius 2
Helicobacter pylori BM012S 1
Helicobacter pylori BM012A 1
Helicobacter pylori SouthAfrica20 1
Helicobacter pylori UM298 1
Helicobacter pylori UM066 1
Helicobacter pylori UM037 1
Helicobacter pylori UM299 1
Helicobacter pylori UM032 1
Helicobacter pylori OK310 1
Helicobacter pylori OK113 1
Helicobacter pylori Rif2 1
Helicobacter pylori Rif1 1
Helicobacter pylori HUP-B14 1
Helicobacter pylori PeCan18 1
Helicobacter pylori Shi169 1
Helicobacter pylori Shi112 1
Helicobacter pylori Shi417 1
Helicobacter pylori XZ274 1
Helicobacter pylori Aklavik86 1
Helicobacter pylori Aklavik117 1
Helicobacter pylori SNT49 1
Helicobacter pylori Puno135 1
Helicobacter pylori Puno120 1
Helicobacter pylori ELS37 1
Helicobacter pylori Gambia94/24 1
Helicobacter pylori SouthAfrica7 1
Helicobacter pylori India7 1
Helicobacter pylori Lithuania75 1
Helicobacter pylori 2017 1
Helicobacter pylori 2018 1
Helicobacter pylori 908 1
Helicobacter pylori F57 1
Helicobacter pylori F30 1
Helicobacter pylori F16 1
Helicobacter pylori Sat464 1
Helicobacter pylori Cuz20 1
Helicobacter pylori PeCan4 1
Helicobacter pylori SJM180 1
Helicobacter pylori B8 1
Helicobacter pylori 52 1
Helicobacter pylori v225d 1
Helicobacter pylori 83 1
Helicobacter pylori 35A 1
Helicobacter pylori P12 1
Helicobacter pylori G27 1
Helicobacter pylori Shi470 1
Helicobacter pylori HPAG1 1
Helicobacter pylori 51 1
Helicobacter pylori F32 1
Helicobacter pylori J99 1
Helicobacter pylori 26695 1
Helicobacter pylori 26695 1
Desulfobacula toluolica Tol2 1
Burkholderia phenoliruptrix BR3459a 1
Burkholderia sp. YI23 1
Burkholderia sp. CCGE1003 1
Burkholderia sp. CCGE1001 1
Sulfuricella denitrificans skB26 0
Gluconacetobacter diazotrophicus PAl 5 0
Gluconobacter oxydans H24 1
Methylobacterium extorquens DM4 1
Sinorhizobium meliloti SM11 1
Sinorhizobium meliloti 1021 1
Rhizobium tropici CIAT 899 2
Shewanella baltica OS117 1
Shewanella baltica OS155 1
Stenotrophomonas maltophilia D457 1
Stenotrophomonas maltophilia JV3 1
Stenotrophomonas maltophilia R551-3 1
Xanthomonas campestris pv. raphani 756C 1
Xanthomonas campestris pv. campestris str. 8004 1
Xanthomonas campestris pv. campestris str. ATCC 33913 1
Edwardsiella tarda C07-087 1
Edwardsiella tarda FL6-60 1
Rahnella aquatilis HX2 1
Yersinia pseudotuberculosis PB1/+ 1
Yersinia pseudotuberculosis YPIII 1
Yersinia pseudotuberculosis IP 32953 1
Yersinia pestis biovar Microtus str. 91001 1
Yersinia pestis A1122 1
Yersinia pestis Z176003 1
Yersinia pestis D182038 1
Yersinia pestis D106004 1
Yersinia pestis biovar Medievalis str. Harbin 35 1
Yersinia pestis Nepal516 1
Yersinia pestis Antiqua 1
Yersinia pestis Angola 1
Yersinia pestis CO92 1
Yersinia pestis KIM10+ 1
Yersinia enterocolitica subsp. palearctica 105.5R(r) 1
Yersinia enterocolitica subsp. palearctica Y11 1
Serratia sp. AS13 1
Serratia plymuthica S13 2
Serratia plymuthica 4Rx13 2
Serratia marcescens FGI94 1
Serratia marcescens WW4 4
Serratia liquefaciens ATCC 27592 1
Dickeya dadantii Ech586 1
Dickeya dadantii 3937 1
Pectobacterium carotovorum subsp. carotovorum PCC21 1
Pantoea ananatis LMG 5342 2
Pantoea ananatis PA13 2
Pantoea ananatis AJ13355 1
Erwinia pyrifoliae DSM 12163 1
Erwinia amylovora CFBP1430 1
Cronobacter sakazakii CMCC 45402 1
Cronobacter sakazakii SP291 1
Cronobacter sakazakii ATCC BAA-894 1
Raoultella ornithinolytica B6 1
Shigella sonnei 53G 1
Shigella flexneri 2002017 1
Shigella flexneri 2a str. 2457T 1
Shigella flexneri 2a str. 301 1
Shigella boydii Sb227 1
Salmonella bongori N268-08 1
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 1
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 1
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 1
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 1
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 1
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 1
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 1
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 1
Salmonella enterica subsp. enterica serovar Newport str. SL254 1
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 1
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 1
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 1
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 1
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 1
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 1
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 1
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 1
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 1
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 1
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 1
Salmonella enterica subsp. enterica serovar Typhi str. CT18 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 1
Salmonella enterica serovar Bovismorbificans genomics 1
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 1
Salmonella enterica subsp. enterica serovar Agona str. 24249 1
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 1
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 1
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 1
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 1
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 1
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 1
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 1
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 1
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 1
Klebsiella oxytoca KCTC 1686 1
Klebsiella pneumoniae JM45 1
Klebsiella pneumoniae CG43 1
Klebsiella pneumoniae KCTC 2242 1
Klebsiella pneumoniae 342 1
Klebsiella pneumoniae subsp. pneumoniae 1084 1
Klebsiella pneumoniae subsp. pneumoniae HS11286 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 1
Enterobacter aerogenes EA1509E 1
Escherichia coli E24377A 1
Escherichia coli E. coli PMV-1 1
Escherichia coli JJ1886 1
Escherichia coli LY180 1
Escherichia coli APEC O78 1
Escherichia coli O7:K1 str. CE10 1
Escherichia coli O104:H4 str. 2009EL-2050 1
Escherichia coli O104:H4 str. 2009EL-2071 1
Escherichia coli O104:H4 str. 2011C-3493 1
Escherichia coli NA114 1
Escherichia coli P12b 1
Escherichia coli str. 'clone D i2' 1
Escherichia coli str. 'clone D i14' 1
Escherichia coli UM146 1
Escherichia coli 042 1
Escherichia coli Xuzhou21 1
Escherichia coli IHE3034 1
Escherichia coli UMNK88 1
Escherichia coli O83:H1 str. NRG 857C 1
Escherichia coli ABU 83972 1
Escherichia coli KO11FL 1
Escherichia coli KO11FL 1
Escherichia coli LF82 1
Escherichia coli ED1a 1
Escherichia coli IAI39 1
Escherichia coli UMN026 1
Escherichia coli 55989 1
Escherichia coli S88 1
Escherichia coli IAI1 1
Escherichia coli W 1
Escherichia coli W 1
Escherichia coli DH1 1
Escherichia coli DH1 1
Escherichia coli ATCC 8739 1
Escherichia coli BL21(DE3) 1
Escherichia coli BL21(DE3) 1
Escherichia coli SMS-3-5 1
Escherichia coli SE15 1
Escherichia coli SE11 1
Escherichia coli APEC O1 1
Escherichia coli O103:H2 str. 12009 1
Escherichia coli UTI89 1
Escherichia coli 536 1
Escherichia coli HS 1
Escherichia coli ETEC H10407 1
Escherichia coli O55:H7 str. RM12579 1
Escherichia coli O55:H7 str. CB9615 1
Escherichia coli O26:H11 str. 11368 1
Escherichia coli CFT073 1
Escherichia coli O111:H- str. 11128 1
Escherichia coli O127:H6 str. E2348/69 1
Escherichia coli O157:H7 str. TW14359 1
Escherichia coli O157:H7 str. EC4115 1
Escherichia coli O157:H7 str. Sakai 1
Escherichia coli O157:H7 str. EDL933 1
Escherichia coli str. K-12 substr. MDS42 1
Escherichia coli BW2952 1
Escherichia coli str. K-12 substr. MG1655 1
Escherichia coli str. K-12 substr. W3110 1
Escherichia coli str. K-12 substr. DH10B 1
Escherichia coli B str. REL606 1
Enterobacter cloacae SCF1 1
Enterobacter cloacae EcWSU1 1
Enterobacter cloacae subsp. cloacae ENHKU01 1
Enterobacter cloacae subsp. cloacae ATCC 13047 1
Pseudomonas aeruginosa MTB-1 1
Pseudomonas aeruginosa M18 1
Pseudomonas aeruginosa LESB58 1
Pseudomonas aeruginosa PAO1 1
Genome Number
Homo sapiens 69_37 0
Pan troglodytes 69_2.1.4 0
Gorilla gorilla 69_3.1 0
Pongo abelii 69_2 0
Nomascus leucogenys 69_1.0 0
Macaca mulatta 69_1 0
Callithrix jacchus 69_3.2.1 0
Tarsius syrichta 69_1 1
Otolemur garnettii 69_3 0
Microcebus murinus 69_1 0
Rattus norvegicus 69_3.4 0
Mus musculus 69_38 1
Ictidomys tridecemlineatus 69_2 0
Cavia porcellus 69_3 0
Oryctolagus cuniculus 69_2 1
Ochotona princeps 69 0
Tupaia belangeri 69 0
Sus scrofa 69_10.2 0
Bos taurus 69_3.1 0
Vicugna pacos 69_1 0
Tursiops truncatus 69_1 0
Mustela putorius furo 69_1.0 0
Ailuropoda melanoleuca 69_1 0
Canis familiaris 69_3.1 0
Equus caballus 69_2 0
Myotis lucifugus 69_2.0 0
Pteropus vampyrus 69_1 0
Sorex araneus 69_1 1
Erinaceus europaeus 69 0
Procavia capensis 69_1 0
Loxodonta africana 69_3 0
Echinops telfairi 69 1
Choloepus hoffmanni 69_1 0
Macropus eugenii 69_1.0 0
Sarcophilus harrisii 69_7.0 0
Monodelphis domestica 69_5 0
Ornithorhynchus anatinus 69_5 1
Petromyzon marinus 69_7.0 0
Meleagris gallopavo 69_2 1
Gallus gallus 69_2 0
Pelodiscus sinensis 69_1.0 0
Anolis carolinensis 69_2.0 0
Xenopus tropicalis 69_4.2 1
Latimeria chalumnae 69_1 0
Gadus morhua 69_1 2
Tetraodon nigroviridis 69_8 1
Takifugu rubripes 69_4 0
Gasterosteus aculeatus 69_1 1
Oryzias latipes 69_1 1
Xiphophorus maculatus 69_4.4.2 1
Oreochromis niloticus 69_1.0 0
Danio rerio 69_9 0
Ciona savignyi 69_2.0 0
Ciona intestinalis 69 0
Drosophila melanogaster 69_5 0
Caenorhabditis elegans 69_215 0
Saccharomyces cerevisiae 69_4 0
Arabidopsis thaliana 10 1
Genome Number
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) 2
Dump top (Dump top) 2
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 1
5_Below_upper_mesopelagic 1
3_050719R 0
Dump bottom (Dump bottom) 1
Cyphomyrmex longiscapus fungus garden 13
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) 7
Methylotrophic community from Lake Washington sediment combined (v2) 4
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) 2
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment 2
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) 2
Activated sludge plasmid pool Morges-2009 (Newbler) 1
Oak Ridge Pristine Groundwater FRC FW301 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots 0
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) 1
1_050719N 1
Global Ocean Sampling Expedition (GOS) 113
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 0
Combined 10
Atta cephalotes fungus garden (ACEF) 7
Endophytic microbiome from Rice 3
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- 2
Human Gut Community Subject 7 2
4_050719Q 1
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil 1
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu 1
7_Oxygen_minimum_layer 1
2_050719S 1
Bath Hot Springs, planktonic community 1
The Salmonella enterica Pan-genome 14
Air microbial communities Singapore indoor air filters 1 1
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top 9
Fungus garden combined (combined) 5
Wastewater Terephthalate-degrading communities from Bioreactor 1
Methylotrophic community from Lake Washington sediment Methanol enrichment 2
Genome Number