Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

EAL domain-like View domain combination »

Genome Number
Leptolyngbya sp. PCC 7376 2
Pseudanabaena sp. PCC 7367 1
Acaryochloris marina MBIC11017 1
Synechocystis sp. PCC 6803 1
Synechococcus elongatus PCC 7942 1
Geitlerinema sp. PCC 7407 1
Gloeocapsa sp. PCC 7428 0
Rivularia sp. PCC 7116 0
Anabaena variabilis ATCC 29413 0
Nostoc sp. PCC 7107 0
Nostoc punctiforme PCC 73102 0
Nostoc sp. PCC 7524 0
Eggerthella sp. YY7918 1
Acidimicrobium ferrooxidans DSM 10331 1
Modestobacter marinus 2
Blastococcus saxobsidens DD2 2
Geodermatophilus obscurus DSM 43160 1
Kineococcus radiotolerans SRS30216 1
Salinispora arenicola CNS-205 1
Salinispora tropica CNB-440 0
Verrucosispora maris AB-18-032 0
Micromonospora sp. L5 0
Micromonospora aurantiaca ATCC 27029 0
Actinoplanes sp. SE50/110 0
Gordonia sp. KTR9 1
Gordonia polyisoprenivorans VH2 2
Gordonia bronchialis DSM 43247 1
Arthrobacter phenanthrenivorans Sphe3 1
Arthrobacter chlorophenolicus A6 1
Arthrobacter aurescens TC1 2
Arthrobacter sp. Rue61a 2
Arthrobacter sp. FB24 1
Anaerolinea thermophila UNI-1 0
Thermomicrobium roseum DSM 5159 1
Truepera radiovictrix DSM 17093 1
Deinococcus maricopensis DSM 21211 1
Megasphaera elsdenii DSM 20460 0
Acidaminococcus fermentans DSM 20731 0
Selenomonas ruminantium subsp. lactilytica TAM6421 1
Ruminococcus albus 7 1
Sulfobacillus acidophilus DSM 10332 0
Oscillibacter valericigenes Sjm18-20 1
Desulfosporosinus acidiphilus SJ4 0
Desulfosporosinus orientis DSM 765 1
Desulfitobacterium hafniense Y51 1
Desulfitobacterium dehalogenans ATCC 51507 0
Desulfotomaculum kuznetsovii DSM 6115 0
Desulfotomaculum ruminis DSM 2154 1
Acetobacterium woodii DSM 1030 2
Eubacterium limosum KIST612 2
Clostridium difficile 630 1
Eubacterium rectale M104/1 1
Eubacterium rectale ATCC 33656 1
Roseburia hominis A2-183 2
Roseburia intestinalis 1
Butyrivibrio proteoclasticus B316 4
Butyrivibrio fibrisolvens 1
Heliobacterium modesticaldum Ice1 1
Clostridium kluyveri DSM 555 1
Thermodesulfobium narugense DSM 14796 1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 1
Exiguobacterium sp. MH3 1
Exiguobacterium sp. AT1b 1
Exiguobacterium sibiricum 255-15 1
Kyrpidia tusciae DSM 2912 1
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 1
Brevibacillus brevis NBRC 100599 0
Paenibacillus terrae HPL-003 1
Paenibacillus mucilaginosus 3016 1
Paenibacillus polymyxa M1 1
Bacillus selenitireducens MLS10 1
Solibacillus silvestris StLB046 1
Geobacillus thermoglucosidasius C56-YS93 1
Lysinibacillus sphaericus C3-41 1
Halobacillus halophilus DSM 2266 1
Bacillus pseudofirmus OF4 1
Bacillus cellulosilyticus DSM 2522 1
Bacillus megaterium DSM 319 1
Bacillus coagulans 2-6 1
Turneriella parva DSM 21527 1
Leptospira borgpetersenii serovar Hardjo-bovis str. L550 1
Leptospira interrogans serovar Lai str. IPAV 2
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1
Borrelia garinii PBi 1
Borrelia bissettii DN127 1
Borrelia afzelii PKo 1
Borrelia burgdorferi B31 1
Borrelia recurrentis A1 1
Borrelia duttonii Ly 1
Borrelia crocidurae str. Achema 1
Borrelia turicatae 91E135 1
Borrelia hermsii DAH 1
Sphaerochaeta pleomorpha str. Grapes 1
Sphaerochaeta globus str. Buddy 1
Spirochaeta africana DSM 8902 1
Calditerrivibrio nitroreducens DSM 19672 1
Deferribacter desulfuricans SSM1 1
Thermotoga lettingae TMO 1
Desulfurobacterium thermolithotrophum DSM 11699 1
Hydrogenobaculum sp. SN 1
Hydrogenobaculum sp. HO 1
Hydrogenobaculum sp. Y04AAS1 1
Aquifex aeolicus VF5 1
Hydrogenobacter thermophilus TK-6 1
Candidatus Koribacter versatilis Ellin345 1
Leptospirillum ferrooxidans C2-3 0
Ilyobacter polytropus DSM 2926 2
Nautilia profundicola AmH 3
Sulfurospirillum deleyianum DSM 6946 1
Sulfurospirillum barnesii SES-3 0
Arcobacter sp. L 0
Arcobacter nitrofigilis DSM 7299 1
Arcobacter butzleri RM4018 1
Campylobacter concisus 13826 0
Campylobacter sp. 03-427 1
Campylobacter fetus subsp. fetus 82-40 1
Wolinella succinogenes DSM 1740 1
Sulfurovum sp. NBC37-1 1
Desulfarculus baarsii DSM 2075 0
Desulfatibacillum alkenivorans AK-01 1
Desulfobacterium autotrophicum HRM2 1
Desulfococcus oleovorans Hxd3 1
Desulfohalobium retbaense DSM 5692 0
Desulfomicrobium baculatum DSM 4028 0
Desulfovibrio piezophilus 0
Desulfovibrio aespoeensis Aspo-2 0
Desulfovibrio magneticus RS-1 0
Desulfovibrio alaskensis G20 1
Desulfovibrio vulgaris subsp. vulgaris DP4 0
Desulfovibrio salexigens DSM 2638 1
Desulfovibrio africanus str. Walvis Bay 0
Hippea maritima DSM 10411 0
Geobacter daltonii FRC-32 1
Geobacter uraniireducens Rf4 1
Stigmatella aurantiaca DW4/3-1 1
Corallococcus coralloides DSM 2259 1
Myxococcus fulvus HW-1 1
Pandoraea sp. RB-44 3
Dechlorosoma suillum PS 1
Pseudogulbenkiania sp. NH8B 1
Laribacter hongkongensis HLHK9 1
Chromobacterium violaceum ATCC 12472 2
Rubrivivax gelatinosus IL144 3
Burkholderia rhizoxinica HKI 454 1
Burkholderia phytofirmans PsJN 1
Burkholderia phymatum STM815 3
Burkholderia xenovorans LB400 4
Ralstonia eutropha JMP134 1
Cupriavidus metallidurans CH34 3
Cupriavidus necator N-1 1
Ralstonia pickettii 12D 1
Burkholderia sp. RPE64 1
Burkholderia sp. CCGE1002 1
Burkholderia thailandensis E264 1
Burkholderia pseudomallei 1106a 1
Burkholderia ambifaria AMMD 1
Burkholderia cenocepacia HI2424 1
Burkholderia multivorans ATCC 17616 1
Burkholderia vietnamiensis G4 1
Delftia sp. Cs1-4 2
Delftia acidovorans SPH-1 2
Acidovorax sp. KKS102 1
Janthinobacterium sp. Marseille 1
Herbaspirillum seropedicae SmR1 1
Bordetella avium 197N 2
Bordetella parapertussis 12822 2
Bordetella bronchiseptica RB50 2
Achromobacter xylosoxidans A8 3
Achromobacter xylosoxidans 2
Methylotenera versatilis 301 1
Methylotenera mobilis JLW8 0
Methylovorus sp. MP688 2
Methylovorus glucosetrophus SIP3-4 2
Methylobacillus flagellatus KT 1
Magnetococcus marinus MC-1 1
Parvularcula bermudensis HTCC2503 0
Asticcacaulis excentricus CB 48 3
Brevundimonas subvibrioides ATCC 15264 2
Caulobacter sp. K31 1
Caulobacter crescentus NA1000 2
Caulobacter segnis ATCC 21756 1
Phenylobacterium zucineum HLK1 2
Sphingopyxis alaskensis RB2256 1
Novosphingobium sp. PP1Y 1
Novosphingobium aromaticivorans DSM 12444 2
Sphingobium sp. SYK-6 3
Sphingomonas sp. MM-1 1
Sphingomonas wittichii RW1 1
Maricaulis maris MCS10 3
Hirschia baltica ATCC 49814 3
Hyphomonas neptunium ATCC 15444 1
Pseudovibrio sp. FO-BEG1 2
Paracoccus denitrificans PD1222 1
Rhodospirillum photometricum DSM 122 0
Tistrella mobilis KA081020-065 3
Magnetospirillum magneticum AMB-1 4
Rhodospirillum centenum SW 4
Rhodospirillum rubrum F11 2
Azospirillum lipoferum 4B 2
Azospirillum sp. B510 3
Azospirillum brasilense Sp245 2
Acidiphilium multivorum AIU301 0
Acidiphilium cryptum JF-5 0
Polymorphum gilvum SL003B-26A1 2
Micavibrio aeruginosavorus ARL-13 1
Neorickettsia sennetsu str. Miyayama 1
Neorickettsia risticii str. Illinois 1
Orientia tsutsugamushi str. Boryong 1
Rickettsia bellii OSU 85-389 1
Rickettsia canadensis str. McKiel 1
Rickettsia typhi str. Wilmington 1
Rickettsia prowazekii str. BuV67-CWPP 1
Rickettsia philipii str. 364D 1
Rickettsia heilongjiangensis 054 1
Rickettsia peacockii str. Rustic 1
Rickettsia felis URRWXCal2 1
Rickettsia slovaca 13-B 1
Rickettsia parkeri str. Portsmouth 1
Rickettsia massiliae MTU5 1
Rickettsia japonica YH 1
Rickettsia africae ESF-5 1
Rickettsia rhipicephali str. 3-7-female6-CWPP 1
Rickettsia montanensis str. OSU 85-930 1
Candidatus Rickettsia amblyommii str. GAT-30V 1
Rickettsia australis str. Cutlack 1
Rickettsia akari str. Hartford 1
Rickettsia rickettsii str. 'Sheila Smith' 1
Rickettsia conorii str. Malish 7 1
Starkeya novella DSM 506 1
Azorhizobium caulinodans ORS 571 2
Methylobacterium chloromethanicum CM4 2
Methylobacterium extorquens AM1 1
Methylobacterium sp. 4-46 1
Methylobacterium populi BJ001 1
Methylobacterium nodulans ORS 2060 1
Methylobacterium radiotolerans JCM 2831 1
Parvibaculum lavamentivorans DS-1 1
Brucella microti CCM 4915 2
Brucella pinnipedialis B2/94 1
Brucella canis ATCC 23365 2
Brucella suis ATCC 23445 1
Brucella melitensis ATCC 23457 2
Brucella abortus S19 2
Genome sequence of Rhizobium sp. strain IRBG74 2
Agrobacterium tumefaciens str. C58 1
Agrobacterium sp. H13-3 3
Mesorhizobium opportunistum WSM2075 1
Pelagibacterium halotolerans B2 2
Hyphomicrobium sp. MC1 1
Hyphomicrobium denitrificans ATCC 51888 1
Oligotropha carboxidovorans OM4 1
Rhodopseudomonas palustris BisA53 1
Nitrobacter winogradskyi Nb-255 1
Nitrobacter hamburgensis X14 1
Bradyrhizobium japonicum USDA 110 2
Bradyrhizobium sp. ORS 278 2
Cellvibrio japonicus Ueda107 0
Aeromonas veronii B565 3
Aeromonas salmonicida subsp. salmonicida A449 2
Aeromonas hydrophila subsp. hydrophila ATCC 7966 5
Aliivibrio salmonicida LFI1238 1
Vibrio fischeri MJ11 4
Vibrio sp. Ex25 4
Vibrio harveyi ATCC BAA-1116 7
Vibrio parahaemolyticus RIMD 2210633 4
Vibrio splendidus LGP32 3
Vibrio anguillarum 775 2
Vibrio furnissii NCTC 11218 6
Vibrio vulnificus MO6-24/O 5
Vibrio cholerae O395 2
Photobacterium profundum SS9 3
Ferrimonas balearica DSM 9799 2
Shewanella piezotolerans WP3 1
Shewanella loihica PV-4 1
Shewanella halifaxensis HAW-EB4 3
Shewanella pealeana ATCC 700345 3
Shewanella oneidensis MR-1 2
Shewanella baltica OS185 1
Shewanella woodyi ATCC 51908 2
Shewanella sp. MR-4 2
Shewanella amazonensis SB2B 1
Shewanella violacea DSS12 1
Shewanella putrefaciens CN-32 1
Pseudoalteromonas sp. SM9913 1
Pseudoalteromonas haloplanktis TAC125 2
Marinobacter adhaerens HP15 1
Alteromonas sp. SN2 2
Alteromonas macleodii str. 'Deep ecotype' 1
Kangiella koreensis DSM 16069 0
Marinomonas posidonica IVIA-Po-181 4
Marinomonas sp. MWYL1 1
Marinomonas mediterranea MMB-1 7
Chromohalobacter salexigens DSM 3043 0
Stenotrophomonas maltophilia K279a 2
Xylella fastidiosa M23 1
Xanthomonas axonopodis pv. citri str. 306 1
Xanthomonas oryzae pv. oryzae PXO99A 1
Xanthomonas campestris pv. campestris str. B100 1
Halothiobacillus neapolitanus c2 1
Alkalilimnicola ehrlichii MLHE-1 1
Thioalkalivibrio sulfidophilus HL-EbGr7 1
Thioalkalivibrio sp. K90mix 4
Halorhodospira halophila SL1 1
Allochromatium vinosum DSM 180 1
Thiocystis violascens DSM 198 1
Legionella longbeachae NSW150 1
Legionella pneumophila str. Corby 1
gamma proteobacterium HdN1 2
Xenorhabdus nematophila ATCC 19061 1
Edwardsiella ictaluri 93-146 2
Edwardsiella tarda EIB202 3
Rahnella sp. Y9602 4
Rahnella aquatilis CIP 78.65 = ATCC 33071 4
Yersinia pseudotuberculosis IP 31758 1
Yersinia pestis Pestoides F 1
Yersinia enterocolitica subsp. enterocolitica 8081 3
Serratia sp. AS12 2
Serratia sp. ATCC 39006 1
Serratia plymuthica AS9 2
Serratia proteamaculans 568 3
Dickeya dadantii Ech703 2
Dickeya zeae Ech1591 1
Pectobacterium wasabiae WPP163 4
Pectobacterium sp. SCC3193 4
Pectobacterium atrosepticum SCRI1043 3
Pectobacterium carotovorum subsp. carotovorum PC1 3
Pantoea sp. At-9b 4
Pantoea vagans C9-1 3
Pantoea ananatis LMG 20103 3
Erwinia tasmaniensis Et1/99 3
Erwinia sp. Ejp617 3
Erwinia billingiae Eb661 5
Erwinia pyrifoliae Ep1/96 3
Erwinia amylovora ATCC 49946 3
Escherichia blattae DSM 4481 3
Cronobacter turicensis z3032 7
Cronobacter sakazakii ES15 6
Enterobacteriaceae bacterium strain FGI 57 6
Shigella sonnei Ss046 5
Shigella flexneri 5 str. 8401 6
Shigella dysenteriae Sd197 2
Shigella boydii CDC 3083-94 2
Salmonella bongori NCTC 12419 5
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 6
Klebsiella oxytoca E718 7
Klebsiella variicola At-22 6
Klebsiella pneumoniae NTUH-K2044 6
Enterobacter aerogenes KCTC 2190 7
Escherichia fergusonii ATCC 35469 7
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 6
Enterobacter sp. R4-368 6
Enterobacter sp. 638 6
Enterobacter asburiae LF7a 10
Enterobacter cloacae subsp. dissolvens SDM 6
Citrobacter rodentium ICC168 8
Citrobacter koseri ATCC BAA-895 8
Pseudomonas sp. TKP 2
Pseudomonas sp. UW4 3
Pseudomonas brassicacearum subsp. brassicacearum NFM421 2
Pseudomonas entomophila L48 2
Pseudomonas fulva 12-X 1
Pseudomonas putida F1 2
Pseudomonas protegens Pf-5 4
Pseudomonas fluorescens SBW25 2
Pseudomonas mendocina ymp 2
Pseudomonas aeruginosa UCBPP-PA14 2
Pseudomonas sp. VLB120 2
Acinetobacter oleivorans DR1 1
Acinetobacter calcoaceticus PHEA-2 1
Acinetobacter baumannii ATCC 17978 1
Acinetobacter sp. ADP1 0
Methylophaga sp. JAM1 1
Genome Number
Oryza sativa ssp. Indica 2
Genome Number
Chroococcidiopsis thermalis PCC 7203 0
Synechocystis sp. PCC 6803 substr. PCC-P 1
Synechocystis sp. PCC 6803 substr. PCC-N 1
Synechocystis sp. PCC 6803 substr. GT-I 1
Synechocystis sp. PCC 6803 1
Cyanobium gracile PCC 6307 0
Synechococcus sp. JA-3-3Ab 1
Synechococcus elongatus PCC 6301 1
Crinalium epipsammum PCC 9333 1
Oscillatoria nigro-viridis PCC 7112 1
Oscillatoria acuminata PCC 6304 1
Cyanothece sp. PCC 7425 1
Cyanobacterium aponinum PCC 10605 1
Stanieria cyanosphaera PCC 7437 0
Calothrix parietina Calothrix sp. PCC 6303 1
Spiroplasma syrphidicola EA-1 1
Spiroplasma diminutum CUAS-1 1
Spiroplasma chrysopicola DF-1 1
Spiroplasma taiwanense CT-1 1
Spiroplasma apis B31 1
Frankia sp. EuI1c 1
Actinoplanes friuliensis DSM 7358 0
Chthonomonas calidirosea T49 0
Sulfobacillus acidophilus TPY 0
Desulfosporosinus meridiei DSM 13257 1
Desulfitobacterium hafniense DCB-2 1
Clostridium difficile BI1 1
Clostridium difficile R20291 1
Clostridium difficile CD196 1
Roseburia intestinalis XB6B4 2
Clostridium kluyveri NBRC 12016 1
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 1
Paenibacillus sp. Y412MC10 1
Paenibacillus mucilaginosus KNP414 1
Paenibacillus mucilaginosus K02 1
Paenibacillus larvae subsp. larvae DSM 25430 1
Paenibacillus polymyxa CR1 1
Paenibacillus polymyxa SC2 1
Paenibacillus polymyxa E681 1
Geobacillus sp. Y4.1MC1 1
Bacillus infantis NRRL B-14911 1
Bacillus megaterium WSH-002 1
Bacillus megaterium QM B1551 1
Bacillus coagulans 36D1 1
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 1
Leptospira interrogans serovar Lai str. 56601 2
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 2
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1
Borrelia garinii NMJW1 1
Borrelia garinii BgVir 1
Borrelia afzelii HLJ01 1
Borrelia afzelii PKo 1
Borrelia burgdorferi CA382 1
Borrelia burgdorferi JD1 1
Borrelia burgdorferi N40 1
Borrelia burgdorferi ZS7 1
Borrelia miyamotoi LB-2001 1
Hydrogenobacter thermophilus TK-6 1
Leptospirillum ferriphilum ML-04 1
Arcobacter butzleri 7h1h 1
Arcobacter butzleri ED-1 1
Desulfovibrio hydrothermalis AM13 = DSM 14728 0
Desulfovibrio vulgaris RCH1 0
Desulfovibrio vulgaris str. 'Miyazaki F' 1
Desulfovibrio vulgaris str. Hildenborough 0
Desulfovibrio gigas DSM 1382 = ATCC 19364 2
Desulfovibrio desulfuricans ND132 0
Pandoraea pnomenusa 3kgm 2
Ralstonia pickettii 12J 1
Ralstonia solanacearum Po82 1
Ralstonia solanacearum PSI07 1
Burkholderia sp. YI23 1
Burkholderia sp. KJ006 1
Burkholderia pseudomallei MSHR305 1
Burkholderia pseudomallei NCTC 13179 1
Burkholderia pseudomallei BPC006 1
Burkholderia pseudomallei 1026b 1
Burkholderia pseudomallei MSHR346 0
Burkholderia pseudomallei 668 1
Burkholderia pseudomallei 1710b 2
Burkholderia pseudomallei K96243 1
Burkholderia mallei NCTC 10229 1
Burkholderia mallei NCTC 10247 1
Burkholderia mallei ATCC 23344 2
Burkholderia lata 1
Burkholderia ambifaria MC40-6 1
Burkholderia cenocepacia MC0-3 2
Burkholderia cenocepacia AU 1054 1
Burkholderia cenocepacia J2315 1
Burkholderia multivorans ATCC 17616 1
Burkholderia cepacia GG4 1
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 1
Bordetella parapertussis Bpp5 1
Bordetella bronchiseptica MO149 2
Bordetella bronchiseptica 253 2
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 3
Caulobacter crescentus CB15 2
Magnetospirillum gryphiswaldense MSR-1 v2 3
Rhodospirillum rubrum ATCC 11170 3
Micavibrio aeruginosavorus EPB 1
Orientia tsutsugamushi str. Ikeda 1
Rickettsia bellii RML369-C 1
Rickettsia canadensis str. CA410 1
Rickettsia typhi str. B9991CWPP 1
Rickettsia typhi str. TH1527 1
Rickettsia prowazekii str. Breinl 1
Rickettsia prowazekii str. NMRC Madrid E 1
Rickettsia prowazekii str. RpGvF24 1
Rickettsia prowazekii str. GvV257 1
Rickettsia prowazekii str. Dachau 1
Rickettsia prowazekii str. Katsinyian 1
Rickettsia prowazekii str. Chernikova 1
Rickettsia prowazekii Rp22 1
Rickettsia prowazekii str. Madrid E 1
Rickettsia slovaca str. D-CWPP 1
Rickettsia massiliae str. AZT80 1
Rickettsia rickettsii str. Arizona 1
Rickettsia rickettsii str. Brazil 1
Rickettsia rickettsii str. Hauke 1
Rickettsia rickettsii str. Colombia 1
Rickettsia rickettsii str. Hlp#2 1
Rickettsia rickettsii str. Hino 1
Rickettsia rickettsii str. Iowa 1
Methylobacterium extorquens DM4 1
Methylobacterium extorquens PA1 2
Brucella ceti TE10759-12 1
Brucella ceti TE28753-12 1
Brucella canis HSK A52141 2
Brucella suis VBI22 2
Brucella suis 1330 2
Brucella suis 1330 2
Brucella melitensis NI 2
Brucella melitensis M5-90 2
Brucella melitensis M28 2
Brucella melitensis bv. 1 str. 16M 2
Brucella abortus A13334 2
Brucella melitensis biovar Abortus 2308 2
Brucella abortus bv. 1 str. 9-941 2
Hyphomicrobium nitrativorans NL23 2
Hyphomicrobium denitrificans 1NES1 1
Oligotropha carboxidovorans OM5 1
Oligotropha carboxidovorans OM5 1
Rhodopseudomonas palustris DX-1 2
Rhodopseudomonas palustris TIE-1 1
Rhodopseudomonas palustris HaA2 1
Rhodopseudomonas palustris BisB5 1
Rhodopseudomonas palustris BisB18 1
Rhodopseudomonas palustris CGA009 2
Bradyrhizobium sp. S23321 1
Bradyrhizobium sp. BTAi1 1
Bradyrhizobium oligotrophicum S58 2
Bradyrhizobium japonicum USDA 6 1
Simiduia agarivorans SA1 = DSM 21679 1
Aeromonas hydrophila ML09-119 3
Vibrio fischeri ES114 2
Vibrio sp. EJY3 1
Vibrio parahaemolyticus BB22OP 4
Vibrio alginolyticus NBRC 15630 = ATCC 17749 3
Vibrio anguillarum Listonella anguillarum M3 2
Vibrio nigripulchritudo VibrioScope 3
Vibrio vulnificus CMCP6 4
Vibrio vulnificus YJ016 4
Vibrio cholerae LMA3984-4 1
Vibrio cholerae M66-2 2
Vibrio cholerae O395 2
Vibrio cholerae IEC224 2
Vibrio cholerae O1 str. 2010EL-1786 2
Vibrio cholerae MJ-1236 2
Vibrio cholerae O1 biovar El Tor str. N16961 2
Shewanella sp. W3-18-1 1
Shewanella sp. ANA-3 2
Shewanella baltica BA175 1
Shewanella baltica OS678 1
Shewanella baltica OS117 1
Shewanella baltica OS223 1
Shewanella baltica OS195 1
Shewanella baltica OS155 1
Shewanella sp. MR-7 2
Shewanella putrefaciens 200 1
Glaciecola psychrophila 170 0
Alteromonas macleodii str. 'Ionian Sea UM4b' 1
Alteromonas macleodii str. 'Ionian Sea UM7' 1
Alteromonas macleodii str. 'Ionian Sea U8' 1
Alteromonas macleodii str. 'Ionian Sea U7' 1
Alteromonas macleodii str. 'Ionian Sea U4' 1
Alteromonas macleodii str. 'Aegean Sea MED64' 1
Alteromonas macleodii str. 'English Channel 615' 1
Alteromonas macleodii AltDE1 1
Alteromonas macleodii str. 'English Channel 673' 2
Alteromonas macleodii str. 'Balearic Sea AD45' 1
Alteromonas macleodii str. 'Black Sea 11' 2
Alteromonas macleodii ATCC 27126 2
Thalassolituus oleivorans MIL-1 1
Stenotrophomonas maltophilia D457 2
Stenotrophomonas maltophilia JV3 2
Stenotrophomonas maltophilia R551-3 2
Xylella fastidiosa subsp. fastidiosa GB514 1
Xylella fastidiosa M12 1
Xylella fastidiosa Temecula1 1
Xylella fastidiosa 9a5c 1
Xanthomonas citri subsp. citri Aw12879 1
Xanthomonas campestris pv. vesicatoria str. 85-10 1
Xanthomonas axonopodis pv. citrumelo F1 1
Xanthomonas axonopodis Xac29-1 1
Xanthomonas oryzae pv. oryzicola BLS256 1
Xanthomonas oryzae pv. oryzae MAFF 311018 1
Xanthomonas oryzae pv. oryzae KACC 10331 1
Xanthomonas campestris pv. raphani 756C 1
Xanthomonas campestris pv. campestris str. 8004 1
Xanthomonas campestris pv. campestris str. ATCC 33913 1
Thioflavicoccus mobilis 8321 1
Legionella pneumophila str. Paris 2
Legionella pneumophila str. Lens 2
Legionella pneumophila subsp. pneumophila LPE509 2
Legionella pneumophila subsp. pneumophila str. Thunder Bay 2
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 2
Legionella pneumophila subsp. pneumophila 1
Legionella pneumophila subsp. pneumophila 2
Legionella pneumophila subsp. pneumophila ATCC 43290 2
Legionella pneumophila 2300/99 Alcoy 1
Edwardsiella tarda C07-087 3
Edwardsiella tarda FL6-60 2
Rahnella aquatilis HX2 4
Yersinia pseudotuberculosis PB1/+ 1
Yersinia pseudotuberculosis YPIII 1
Yersinia pseudotuberculosis IP 32953 1
Yersinia pestis biovar Microtus str. 91001 1
Yersinia pestis A1122 1
Yersinia pestis Z176003 1
Yersinia pestis D182038 1
Yersinia pestis D106004 1
Yersinia pestis biovar Medievalis str. Harbin 35 1
Yersinia pestis Nepal516 1
Yersinia pestis Antiqua 1
Yersinia pestis KIM10+ 1
Yersinia enterocolitica subsp. palearctica 105.5R(r) 3
Yersinia enterocolitica subsp. palearctica Y11 3
Serratia sp. AS13 2
Serratia plymuthica S13 2
Serratia plymuthica 4Rx13 2
Serratia marcescens FGI94 3
Serratia marcescens WW4 2
Serratia liquefaciens ATCC 27592 3
Dickeya dadantii Ech586 1
Dickeya dadantii 3937 1
Pectobacterium carotovorum subsp. carotovorum PCC21 4
Pantoea ananatis LMG 5342 3
Pantoea ananatis PA13 3
Pantoea ananatis AJ13355 3
Erwinia pyrifoliae DSM 12163 3
Erwinia amylovora CFBP1430 3
Cronobacter sakazakii CMCC 45402 6
Cronobacter sakazakii SP291 6
Cronobacter sakazakii ATCC BAA-894 6
Raoultella ornithinolytica B6 8
Shigella sonnei 53G 6
Shigella flexneri 2002017 4
Shigella flexneri 2a str. 2457T 4
Shigella flexneri 2a str. 301 4
Shigella dysenteriae 1617 4
Shigella boydii Sb227 2
Salmonella bongori N268-08 5
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 4
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 6
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 6
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 6
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 6
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 6
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 7
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 6
Salmonella enterica subsp. enterica serovar Newport str. SL254 6
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 6
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 6
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 6
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 6
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 6
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 6
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 5
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 6
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 6
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 6
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 6
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 6
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 6
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 6
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 6
Salmonella enterica subsp. enterica serovar Typhi str. CT18 6
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 6
Salmonella enterica serovar Bovismorbificans genomics 6
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 6
Salmonella enterica subsp. enterica serovar Agona str. 24249 6
Salmonella enterica subsp. enterica serovar Agona str. SL483 6
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 5
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 6
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 6
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 6
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 6
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 5
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 6
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 6
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 5
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 5
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 4
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 6
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 4
Klebsiella oxytoca KCTC 1686 7
Klebsiella pneumoniae JM45 5
Klebsiella pneumoniae CG43 6
Klebsiella pneumoniae KCTC 2242 5
Klebsiella pneumoniae 342 6
Klebsiella pneumoniae subsp. pneumoniae 1084 6
Klebsiella pneumoniae subsp. pneumoniae HS11286 5
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 8
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 7
Enterobacter aerogenes EA1509E 6
Escherichia coli E24377A 6
Escherichia coli E. coli PMV-1 6
Escherichia coli JJ1886 6
Escherichia coli LY180 6
Escherichia coli APEC O78 7
Escherichia coli O7:K1 str. CE10 6
Escherichia coli O104:H4 str. 2009EL-2050 7
Escherichia coli O104:H4 str. 2009EL-2071 7
Escherichia coli O104:H4 str. 2011C-3493 7
Escherichia coli NA114 6
Escherichia coli P12b 6
Escherichia coli str. 'clone D i2' 6
Escherichia coli str. 'clone D i14' 6
Escherichia coli UM146 6
Escherichia coli 042 7
Escherichia coli Xuzhou21 7
Escherichia coli IHE3034 6
Escherichia coli UMNK88 9
Escherichia coli O83:H1 str. NRG 857C 5
Escherichia coli ABU 83972 6
Escherichia coli KO11FL 7
Escherichia coli KO11FL 7
Escherichia coli LF82 6
Escherichia coli ED1a 6
Escherichia coli IAI39 6
Escherichia coli UMN026 6
Escherichia coli 55989 7
Escherichia coli S88 7
Escherichia coli IAI1 7
Escherichia coli W 7
Escherichia coli W 7
Escherichia coli DH1 7
Escherichia coli DH1 7
Escherichia coli ATCC 8739 7
Escherichia coli BL21(DE3) 6
Escherichia coli BL21(DE3) 6
Escherichia coli SMS-3-5 7
Escherichia coli SE15 5
Escherichia coli SE11 7
Escherichia coli APEC O1 7
Escherichia coli O103:H2 str. 12009 7
Escherichia coli UTI89 6
Escherichia coli 536 6
Escherichia coli HS 6
Escherichia coli ETEC H10407 8
Escherichia coli O55:H7 str. RM12579 8
Escherichia coli O55:H7 str. CB9615 8
Escherichia coli O26:H11 str. 11368 7
Escherichia coli CFT073 6
Escherichia coli O111:H- str. 11128 7
Escherichia coli O127:H6 str. E2348/69 6
Escherichia coli O157:H7 str. TW14359 7
Escherichia coli O157:H7 str. EC4115 7
Escherichia coli O157:H7 str. Sakai 7
Escherichia coli O157:H7 str. EDL933 7
Escherichia coli str. K-12 substr. MDS42 6
Escherichia coli BW2952 7
Escherichia coli str. K-12 substr. MG1655 7
Escherichia coli str. K-12 substr. W3110 7
Escherichia coli str. K-12 substr. DH10B 6
Escherichia coli B str. REL606 6
Enterobacter cloacae SCF1 6
Enterobacter cloacae EcWSU1 7
Enterobacter cloacae subsp. cloacae ENHKU01 6
Enterobacter cloacae subsp. cloacae NCTC 9394 6
Enterobacter cloacae subsp. cloacae ATCC 13047 7
Pseudomonas denitrificans ATCC 13867 2
Pseudomonas monteilii SB3101 2
Pseudomonas monteilii SB3078 2
Pseudomonas putida H8234 2
Pseudomonas putida HB3267 2
Pseudomonas putida NBRC 14164 2
Pseudomonas putida DOT-T1E 2
Pseudomonas putida S16 2
Pseudomonas putida BIRD-1 2
Pseudomonas putida W619 2
Pseudomonas putida ND6 2
Pseudomonas putida KT2440 2
Pseudomonas putida GB-1 2
Pseudomonas protegens CHA0 4
Pseudomonas poae RE*1-1-14 1
Pseudomonas fluorescens F113 2
Pseudomonas fluorescens A506 2
Pseudomonas fluorescens R124 3
Pseudomonas fluorescens Pf0-1 2
Pseudomonas mendocina NK-01 1
Pseudomonas aeruginosa SCV20265 2
Pseudomonas aeruginosa MTB-1 2
Pseudomonas aeruginosa LES431 2
Pseudomonas aeruginosa RP73 2
Pseudomonas aeruginosa B136-33 2
Pseudomonas aeruginosa PA1R 2
Pseudomonas aeruginosa PA1 2
Pseudomonas aeruginosa DK2 2
Pseudomonas aeruginosa NCGM2.S1 2
Pseudomonas aeruginosa M18 3
Pseudomonas aeruginosa LESB58 2
Pseudomonas aeruginosa PA7 4
Pseudomonas aeruginosa PAO1 3
Acinetobacter genomosp. 13TU RUH2624 0
Acinetobacter sp. SH024 1
Acinetobacter calcoaceticus ruh2202 1
Acinetobacter baumannii ZW85-1 1
Acinetobacter baumannii TYTH-1 2
Acinetobacter baumannii BJAB0868 1
Acinetobacter baumannii BJAB0715 1
Acinetobacter baumannii BJAB07104 1
Acinetobacter baumannii TCDC-AB0715 1
Acinetobacter baumannii D1279779 1
Acinetobacter baumannii MDR-TJ 1
Acinetobacter baumannii 1656-2 1
Acinetobacter baumannii ATCC 19606 1
Acinetobacter baumannii AB307-0294 0
Acinetobacter baumannii AYE 0
Acinetobacter baumannii MDR-ZJ06 1
Acinetobacter baumannii ACICU 1
Acinetobacter radioresistens SH164 0
Acinetobacter junii SH205 0
Acinetobacter johnsonii SH046 0
Acinetobacter lwoffii SH145 0
Genome Number
Genome Number
simLC - Simulated Low Complexity Metagenome 6
simHC - Simulated High Complexity Metagenome 6
simMC - Simulated Medium Complexity Metagenome 9
1_050719N 2
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- 8
Olavius algarvensis endosymbiont metagenome Gamma3 1
Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined 7
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime 1
Air microbial communities Singapore indoor air filters 2 7
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots 1
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) 5
Methylotrophic community from Lake Washington sediment Formate enrichment 1
Endophytic microbiome from Rice 5
Guerrero Negro salt ponds hypersaline mat 07(S) 1
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 4
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 0
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 3
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) 55
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats 3
Combined 35
Wastewater Terephthalate-degrading communities from Bioreactor 1
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ 15
Human Gut Community Subject 8 2
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil 11
3_050719R 2
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) 9
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg 1
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 5
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 1
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) 7
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region 1
Methylotrophic community from Lake Washington sediment combined (v2) 3
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment 1
Soil microbial communities from Minnesota Farm 4
2_050719S 1
5_050719P 4
The Salmonella enterica Pan-genome 179
Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring 3
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top 53
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< 3
Atta cephalotes fungus garden (ACEF) 26
Methylotrophic community from Lake Washington sediment Methylamine enrichment 0
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- 15
Human Gut Community Subject 7 2
Dump bottom (Dump bottom) 11
4_050719Q 2
Air microbial communities Singapore indoor air filters 1 9
Sludge/Australian, Phrap Assembly 1
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) 7
Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs 1
Dump top (Dump top) 7
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer 1
Methylotrophic community from Lake Washington sediment Methane enrichment 1
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 5
Marine anammox bioreactor enriched for Scalindua species 1
Oak Ridge Pristine Groundwater FRC FW301 4
Bath Hot Springs, planktonic community 1
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) 3
Global Ocean Sampling Expedition (GOS) 124
Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin 3
Cyphomyrmex longiscapus fungus garden 44
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 3
Fungus garden combined (combined) 26
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may 2
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) 12
Hindgut microbiome of Nasutitermes sp. (Costa Rica) 2
Genome Number