Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

HRDC-like View domain combination »

Ribonuclease H-like View domain combination »

Genome Number
Conexibacter woesei DSM 14684 1
Cryptobacterium curtum DSM 15641 1
Eggerthella sp. YY7918 1
Eggerthella lenta DSM 2243 1
Slackia heliotrinireducens DSM 20476 1
Olsenella uli DSM 7084 1
Atopobium parvulum DSM 20469 1
Coriobacterium glomerans PW2 1
Ilumatobacter coccineus 1
Caldilinea aerophila DSM 14535 = NBRC 104270 1
Anaerolinea thermophila UNI-1 1
Gemmatimonas aurantiaca T-27 1
Phycisphaera mikurensis NBRC 102666 1
Isosphaera pallida ATCC 43644 1
Planctomyces brasiliensis DSM 5305 1
Planctomyces limnophilus DSM 3776 1
Rhodopirellula baltica SH 1 1
Pirellula staleyi DSM 6068 1
Coraliomargarita akajimensis DSM 45221 1
Candidatus Chloracidobacterium thermophilum B 1
Candidatus Nitrospira defluvii 1
Desulfotalea psychrophila LSv54 1
Desulfatibacillum alkenivorans AK-01 1
Desulfobacterium autotrophicum HRM2 1
Desulfococcus oleovorans Hxd3 1
Desulfovibrio africanus str. Walvis Bay 1
Geobacter daltonii FRC-32 1
Geobacter sp. M21 1
Geobacter uraniireducens Rf4 1
Geobacter lovleyi SZ 1
Geobacter bemidjiensis Bem 1
Geobacter sulfurreducens KN400 1
Geobacter metallireducens GS-15 1
Pelobacter propionicus DSM 2379 1
Pelobacter carbinolicus DSM 2380 1
Haliangium ochraceum DSM 14365 1
Stigmatella aurantiaca DW4/3-1 1
Corallococcus coralloides DSM 2259 1
Myxococcus xanthus DK 1622 1
Myxococcus fulvus HW-1 1
Parvularcula bermudensis HTCC2503 1
Asticcacaulis excentricus CB 48 1
Brevundimonas subvibrioides ATCC 15264 1
Caulobacter sp. K31 1
Caulobacter crescentus NA1000 1
Caulobacter segnis ATCC 21756 1
Phenylobacterium zucineum HLK1 1
Erythrobacter litoralis HTCC2594 1
Sphingopyxis alaskensis RB2256 1
Novosphingobium sp. PP1Y 1
Novosphingobium aromaticivorans DSM 12444 1
Sphingobium sp. SYK-6 1
Sphingobium japonicum UT26S 1
Sphingobium chlorophenolicum L-1 1
Sphingomonas sp. MM-1 1
Sphingomonas wittichii RW1 1
Zymomonas mobilis subsp. mobilis NCIMB 11163 1
Maricaulis maris MCS10 1
Hirschia baltica ATCC 49814 1
Hyphomonas neptunium ATCC 15444 1
Dinoroseobacter shibae DFL 12 1
Phaeobacter gallaeciensis 2.10 1
Pseudovibrio sp. FO-BEG1 1
Jannaschia sp. CCS1 1
Ruegeria sp. TM1040 1
Ruegeria pomeroyi DSS-3 1
Ketogulonicigenium vulgare Y25 1
Ketogulonigenium vulgarum WSH-001 1
Roseobacter litoralis Och 149 1
Roseobacter denitrificans OCh 114 1
Rhodobacter sphaeroides ATCC 17029 1
Rhodobacter capsulatus SB 1003 1
Paracoccus denitrificans PD1222 1
Rhodospirillum photometricum DSM 122 1
Tistrella mobilis KA081020-065 1
Magnetospirillum magneticum AMB-1 1
Rhodospirillum centenum SW 1
Rhodospirillum rubrum F11 1
Azospirillum lipoferum 4B 1
Azospirillum sp. B510 1
Azospirillum brasilense Sp245 1
Gluconacetobacter xylinus NBRC 3288 1
Granulibacter bethesdensis CGDNIH1 1
Gluconacetobacter diazotrophicus PAl 5 1
Acidiphilium multivorum AIU301 1
Acidiphilium cryptum JF-5 1
Gluconobacter oxydans 621H 1
Acetobacter pasteurianus IFO 3283-01 1
Polymorphum gilvum SL003B-26A1 1
Micavibrio aeruginosavorus ARL-13 1
Candidatus Puniceispirillum marinum IMCC1322 1
Wolbachia endosymbiont of Culex quinquefasciatus Pel 1
Wolbachia sp. wRi 1
Starkeya novella DSM 506 1
Xanthobacter autotrophicus Py2 1
Azorhizobium caulinodans ORS 571 1
Methylobacterium chloromethanicum CM4 1
Methylobacterium extorquens AM1 1
Methylobacterium sp. 4-46 1
Methylobacterium populi BJ001 1
Methylobacterium nodulans ORS 2060 1
Methylobacterium radiotolerans JCM 2831 1
Parvibaculum lavamentivorans DS-1 1
Ochrobactrum anthropi ATCC 49188 1
Brucella microti CCM 4915 1
Brucella pinnipedialis B2/94 1
Brucella canis ATCC 23365 1
Brucella suis ATCC 23445 1
Brucella melitensis ATCC 23457 1
Brucella ovis ATCC 25840 1
Brucella abortus S19 1
Sinorhizobium fredii NGR234 1
Sinorhizobium medicae WSM419 1
Sinorhizobium meliloti AK83 1
Genome sequence of Rhizobium sp. strain IRBG74 1
Rhizobium etli CIAT 652 1
Rhizobium leguminosarum bv. viciae 3841 1
Agrobacterium tumefaciens str. C58 1
Agrobacterium radiobacter K84 1
Agrobacterium sp. H13-3 1
Agrobacterium vitis S4 1
Mesorhizobium sp. BNC1 1
Mesorhizobium opportunistum WSM2075 1
Mesorhizobium ciceri biovar biserrulae WSM1271 1
Mesorhizobium loti MAFF303099 1
Methylocella silvestris BL2 1
Beijerinckia indica subsp. indica ATCC 9039 1
Pelagibacterium halotolerans B2 1
Rhodomicrobium vannielii ATCC 17100 1
Hyphomicrobium sp. MC1 1
Hyphomicrobium denitrificans ATCC 51888 1
Oligotropha carboxidovorans OM4 1
Rhodopseudomonas palustris BisA53 1
Nitrobacter winogradskyi Nb-255 1
Nitrobacter hamburgensis X14 1
Bradyrhizobium japonicum USDA 110 1
Bradyrhizobium sp. ORS 278 1
Methylocystis sp. SC2 1
Bartonella tribocorum CIP 105476 1
Bartonella clarridgeiae 73 1
Bartonella henselae str. Houston-1 1
Bartonella grahamii as4aup 1
Bartonella quintana str. Toulouse 1
Bartonella bacilliformis KC583 1
Saccharophagus degradans 2-40 1
Teredinibacter turnerae T7901 1
Cellvibrio japonicus Ueda107 1
Aggregatibacter aphrophilus NJ8700 1
Aggregatibacter actinomycetemcomitans D7S-1 1
Haemophilus somnus 129PT 1
Gallibacterium anatis UMN179 1
Pasteurella multocida subsp. multocida str. 3480 1
Haemophilus parasuis SH0165 1
Haemophilus ducreyi 35000HP 1
Haemophilus parainfluenzae T3T1 1
Haemophilus influenzae PittEE 1
Actinobacillus succinogenes 130Z 1
Actinobacillus pleuropneumoniae serovar 5b str. L20 1
Oceanimonas sp. GK1 1
Tolumonas auensis DSM 9187 1
Aeromonas veronii B565 1
Aeromonas salmonicida subsp. salmonicida A449 1
Aeromonas hydrophila subsp. hydrophila ATCC 7966 1
Aliivibrio salmonicida LFI1238 1
Vibrio fischeri MJ11 1
Vibrio sp. Ex25 1
Vibrio harveyi ATCC BAA-1116 1
Vibrio parahaemolyticus RIMD 2210633 1
Vibrio splendidus LGP32 1
Vibrio anguillarum 775 1
Vibrio furnissii NCTC 11218 1
Vibrio vulnificus MO6-24/O 1
Vibrio cholerae O395 1
Photobacterium profundum SS9 1
Psychromonas ingrahamii 37 1
Psychromonas sp. CNPT3 1
Idiomarina loihiensis L2TR 1
Ferrimonas balearica DSM 9799 1
Shewanella piezotolerans WP3 1
Shewanella loihica PV-4 1
Shewanella halifaxensis HAW-EB4 1
Shewanella sediminis HAW-EB3 1
Shewanella denitrificans OS217 1
Shewanella pealeana ATCC 700345 1
Shewanella oneidensis MR-1 1
Shewanella baltica OS185 1
Shewanella woodyi ATCC 51908 1
Shewanella sp. MR-4 1
Shewanella amazonensis SB2B 1
Shewanella violacea DSS12 1
Shewanella frigidimarina NCIMB 400 1
Shewanella putrefaciens CN-32 1
Colwellia psychrerythraea 34H 1
Pseudoalteromonas sp. SM9913 1
Pseudoalteromonas atlantica T6c 1
Pseudoalteromonas haloplanktis TAC125 1
Glaciecola sp. 4H-3-7+YE-5 1
Glaciecola nitratireducens FR1064 1
Marinobacter adhaerens HP15 1
Marinobacter sp. BSs20148 1
Marinobacter hydrocarbonoclasticus ATCC 49840 1
Marinobacter aquaeolei VT8 1
Alteromonas sp. SN2 1
Alteromonas macleodii str. 'Deep ecotype' 1
Kangiella koreensis DSM 16069 1
Hahella chejuensis KCTC 2396 1
Alcanivorax borkumensis SK2 1
Marinomonas posidonica IVIA-Po-181 1
Marinomonas sp. MWYL1 1
Marinomonas mediterranea MMB-1 1
Chromohalobacter salexigens DSM 3043 1
Halomonas elongata DSM 2581 1
Methylomicrobium alcaliphilum 1
Methylomonas methanica MC09 1
Methylococcus capsulatus str. Bath 1
Rhodanobacter denitrificans 1
Frateuria aurantia DSM 6220 1
Pseudoxanthomonas spadix BD-a59 1
Pseudoxanthomonas suwonensis 11-1 1
Stenotrophomonas maltophilia K279a 1
Xylella fastidiosa M23 1
Xanthomonas axonopodis pv. citri str. 306 1
Xanthomonas albilineans GPE PC73 1
Xanthomonas oryzae pv. oryzae PXO99A 1
Xanthomonas campestris pv. campestris str. B100 1
Halothiobacillus neapolitanus c2 1
Thioalkalivibrio sulfidophilus HL-EbGr7 1
Thioalkalivibrio sp. K90mix 1
gamma proteobacterium HdN1 1
Photorhabdus asymbiotica 1
Photorhabdus luminescens subsp. laumondii TTO1 1
Xenorhabdus bovienii SS-2004 1
Xenorhabdus nematophila ATCC 19061 1
Providencia stuartii MRSN 2154 1
Proteus mirabilis HI4320 1
Edwardsiella ictaluri 93-146 1
Edwardsiella tarda EIB202 1
Rahnella sp. Y9602 1
Rahnella aquatilis CIP 78.65 = ATCC 33071 1
Yersinia pseudotuberculosis IP 31758 1
Yersinia pestis Pestoides F 1
Yersinia enterocolitica subsp. enterocolitica 8081 1
Serratia sp. AS12 1
Serratia sp. ATCC 39006 1
Serratia plymuthica AS9 1
Serratia proteamaculans 568 1
Dickeya dadantii Ech703 1
Dickeya zeae Ech1591 1
Pectobacterium wasabiae WPP163 1
Pectobacterium sp. SCC3193 1
Pectobacterium atrosepticum SCRI1043 1
Pectobacterium carotovorum subsp. carotovorum PC1 1
Sodalis glossinidius str. 'morsitans' 1
Pantoea sp. At-9b 1
Pantoea vagans C9-1 1
Pantoea ananatis LMG 20103 1
Erwinia tasmaniensis Et1/99 1
Erwinia sp. Ejp617 1
Erwinia billingiae Eb661 1
Erwinia pyrifoliae Ep1/96 1
Erwinia amylovora ATCC 49946 1
Escherichia blattae DSM 4481 1
Cronobacter turicensis z3032 1
Cronobacter sakazakii ES15 1
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 1
Enterobacteriaceae bacterium strain FGI 57 1
Shigella sonnei Ss046 1
Shigella flexneri 5 str. 8401 1
Shigella dysenteriae Sd197 1
Shigella boydii CDC 3083-94 1
Salmonella bongori NCTC 12419 1
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 1
Klebsiella oxytoca E718 1
Klebsiella variicola At-22 1
Klebsiella pneumoniae NTUH-K2044 1
Enterobacter aerogenes KCTC 2190 1
Escherichia fergusonii ATCC 35469 1
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 1
Enterobacter sp. R4-368 1
Enterobacter sp. 638 1
Enterobacter asburiae LF7a 1
Enterobacter cloacae subsp. dissolvens SDM 1
Citrobacter rodentium ICC168 1
Citrobacter koseri ATCC BAA-895 1
Azotobacter vinelandii DJ 1
Pseudomonas sp. TKP 1
Pseudomonas sp. UW4 1
Pseudomonas brassicacearum subsp. brassicacearum NFM421 1
Pseudomonas entomophila L48 1
Pseudomonas syringae pv. tomato str. DC3000 1
Pseudomonas stutzeri A1501 1
Pseudomonas fulva 12-X 1
Pseudomonas putida F1 1
Pseudomonas protegens Pf-5 1
Pseudomonas fluorescens SBW25 1
Pseudomonas mendocina ymp 1
Pseudomonas aeruginosa UCBPP-PA14 1
Pseudomonas sp. VLB120 1
Psychrobacter sp. G 1
Psychrobacter sp. PRwf-1 1
Psychrobacter arcticus 273-4 1
Psychrobacter cryohalolentis K5 1
Moraxella catarrhalis RH4 1
Acinetobacter oleivorans DR1 1
Acinetobacter calcoaceticus PHEA-2 1
Acinetobacter baumannii ATCC 17978 1
Acinetobacter sp. ADP1 1
Methylophaga sp. JAM1 1
Cycloclasticus sp. P1 1
Thioalkalimicrobium cyclicum ALM1 1
Francisella sp. TX077308 1
Francisella philomiragia subsp. philomiragia ATCC 25017 1
Francisella tularensis subsp. tularensis WY96-3418 1
Francisella cf. novicida 3523 1
Francisella novicida U112 1
Genome Number
Genome Number
Adlercreutzia equolifaciens DSM 19450 1
Singulisphaera acidiphila DSM 18658 1
Desulfobacula toluolica Tol2 1
Geobacter sulfurreducens PCA 1
Sorangium cellulosum So0157-2 1
Myxococcus stipitatus DSM 14675 1
Caulobacter crescentus CB15 1
Zymomonas mobilis subsp. mobilis ATCC 29191 1
Zymomonas mobilis subsp. mobilis CP4 1
Zymomonas mobilis subsp. mobilis ATCC 10988 1
Zymomonas mobilis subsp. mobilis ZM4 1
Zymomonas mobilis subsp. pomaceae ATCC 29192 1
Phaeobacter gallaeciensis DSM 17395 1
Phaeobacter gallaeciensis DSM 26640 1
Leisingera methylohalidivorans DSM 14336 1
Octadecabacter antarcticus 307 1
Octadecabacter arcticus 238 1
Rhodobacter sphaeroides KD131 1
Rhodobacter sphaeroides ATCC 17025 1
Rhodobacter sphaeroides 2.4.1 1
Paracoccus aminophilus JCM 7686 1
Candidatus Endolissoclinum faulkneri L2 1
Magnetospirillum gryphiswaldense MSR-1 v2 1
Rhodospirillum rubrum ATCC 11170 1
Gluconacetobacter diazotrophicus PAl 5 1
Gluconobacter oxydans H24 1
Acetobacter pasteurianus 386B 1
Acetobacter pasteurianus IFO 3283-12 1
Acetobacter pasteurianus IFO 3283-01-42C 1
Acetobacter pasteurianus IFO 3283-32 1
Acetobacter pasteurianus IFO 3283-26 1
Acetobacter pasteurianus IFO 3283-22 1
Acetobacter pasteurianus IFO 3283-07 1
Acetobacter pasteurianus IFO 3283-03 1
Micavibrio aeruginosavorus EPB 1
Wolbachia endosymbiont of Drosophila melanogaster 1
Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon 1
Wolbachia endosymbiont strain TRS of Brugia malayi 1
Wolbachia endosymbiont of Drosophila simulans wHa 1
Wolbachia endosymbiont of Drosophila simulans wNo 1
Ehrlichia muris AS145 1
Methylobacterium extorquens DM4 1
Methylobacterium extorquens PA1 1
Brucella ceti TE10759-12 1
Brucella ceti TE28753-12 1
Brucella canis HSK A52141 1
Brucella suis VBI22 1
Brucella suis 1330 1
Brucella suis 1330 1
Brucella melitensis NI 1
Brucella melitensis M5-90 1
Brucella melitensis M28 1
Brucella melitensis bv. 1 str. 16M 1
Brucella abortus A13334 1
Brucella melitensis biovar Abortus 2308 1
Brucella abortus bv. 1 str. 9-941 1
Sinorhizobium fredii USDA 257 1
Sinorhizobium fredii HH103 1
Sinorhizobium meliloti 2011 1
Sinorhizobium meliloti GR4 1
Sinorhizobium meliloti Rm41 1
Sinorhizobium meliloti SM11 1
Sinorhizobium meliloti BL225C 1
Sinorhizobium meliloti 1021 1
Rhizobium etli CFN 42 1
Rhizobium etli bv. mimosae str. Mim1 1
Rhizobium tropici CIAT 899 1
Rhizobium leguminosarum bv. trifolii WSM2304 1
Rhizobium leguminosarum bv. trifolii WSM1325 1
Liberibacter crescens BT-1 1
Mesorhizobium australicum WSM2073 1
Hyphomicrobium nitrativorans NL23 1
Hyphomicrobium denitrificans 1NES1 1
Oligotropha carboxidovorans OM5 1
Oligotropha carboxidovorans OM5 1
Rhodopseudomonas palustris DX-1 1
Rhodopseudomonas palustris TIE-1 1
Rhodopseudomonas palustris HaA2 1
Rhodopseudomonas palustris BisB5 1
Rhodopseudomonas palustris BisB18 1
Rhodopseudomonas palustris CGA009 1
Bradyrhizobium sp. S23321 1
Bradyrhizobium sp. BTAi1 1
Bradyrhizobium oligotrophicum S58 1
Bradyrhizobium japonicum USDA 6 1
Bartonella australis Aust/NH1 1
Bartonella vinsonii subsp. berkhoffii str. Winnie 1
Bartonella quintana RM-11 1
Simiduia agarivorans SA1 = DSM 21679 1
Mannheimia succiniciproducens MBEL55E 1
Bibersteinia trehalosi USDA-ARS-USMARC-192 1
Aggregatibacter actinomycetemcomitans ANH9381 1
Aggregatibacter actinomycetemcomitans D11S-1 1
Haemophilus somnus 2336 1
Mannheimia haemolytica USMARC_2286 1
Mannheimia haemolytica M42548 1
Mannheimia haemolytica D174 1
Mannheimia haemolytica D171 1
Mannheimia haemolytica D153 1
Mannheimia haemolytica USDA-ARS-USMARC-183 1
Mannheimia haemolytica USDA-ARS-USMARC-185 1
Pasteurella multocida 36950 1
Pasteurella multocida subsp. multocida str. HN06 1
Pasteurella multocida subsp. multocida str. Pm70 1
Haemophilus parasuis ZJ0906 1
Haemophilus influenzae KR494 1
Haemophilus influenzae F3047 1
Haemophilus influenzae F3031 1
Haemophilus influenzae 10810 1
Haemophilus influenzae PittGG 1
Haemophilus influenzae 86-028NP 1
Haemophilus influenzae R2866 1
Haemophilus influenzae R2846 1
Haemophilus influenzae Rd KW20 1
Actinobacillus suis H91-0380 1
Actinobacillus pleuropneumoniae serovar 3 str. JL03 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 1
Aeromonas hydrophila ML09-119 1
Vibrio fischeri ES114 1
Vibrio sp. EJY3 1
Vibrio parahaemolyticus BB22OP 1
Vibrio alginolyticus NBRC 15630 = ATCC 17749 1
Vibrio anguillarum Listonella anguillarum M3 1
Vibrio nigripulchritudo VibrioScope 1
Vibrio vulnificus CMCP6 1
Vibrio vulnificus YJ016 1
Vibrio cholerae LMA3984-4 1
Vibrio cholerae M66-2 1
Vibrio cholerae O395 1
Vibrio cholerae IEC224 1
Vibrio cholerae O1 str. 2010EL-1786 1
Vibrio cholerae MJ-1236 1
Vibrio cholerae O1 biovar El Tor str. N16961 1
Idiomarina loihiensis GSL 199 1
Shewanella sp. W3-18-1 1
Shewanella sp. ANA-3 1
Shewanella baltica BA175 1
Shewanella baltica OS678 1
Shewanella baltica OS117 1
Shewanella baltica OS223 1
Shewanella baltica OS195 1
Shewanella baltica OS155 1
Shewanella sp. MR-7 1
Shewanella putrefaciens 200 1
Glaciecola psychrophila 170 1
Alteromonas macleodii str. 'Ionian Sea UM4b' 1
Alteromonas macleodii str. 'Ionian Sea UM7' 1
Alteromonas macleodii str. 'Ionian Sea U8' 1
Alteromonas macleodii str. 'Ionian Sea U7' 1
Alteromonas macleodii str. 'Ionian Sea U4' 1
Alteromonas macleodii str. 'Aegean Sea MED64' 1
Alteromonas macleodii str. 'English Channel 615' 1
Alteromonas macleodii AltDE1 1
Alteromonas macleodii str. 'English Channel 673' 1
Alteromonas macleodii str. 'Balearic Sea AD45' 1
Alteromonas macleodii str. 'Black Sea 11' 1
Alteromonas macleodii ATCC 27126 1
Alcanivorax dieselolei B5 1
Thalassolituus oleivorans MIL-1 1
Stenotrophomonas maltophilia D457 1
Stenotrophomonas maltophilia JV3 1
Stenotrophomonas maltophilia R551-3 1
Xylella fastidiosa subsp. fastidiosa GB514 1
Xylella fastidiosa M12 1
Xylella fastidiosa Temecula1 1
Xylella fastidiosa 9a5c 1
Xanthomonas citri subsp. citri Aw12879 1
Xanthomonas campestris pv. vesicatoria str. 85-10 1
Xanthomonas axonopodis pv. citrumelo F1 1
Xanthomonas axonopodis Xac29-1 1
Xanthomonas oryzae pv. oryzicola BLS256 1
Xanthomonas oryzae pv. oryzae MAFF 311018 1
Xanthomonas oryzae pv. oryzae KACC 10331 1
Xanthomonas campestris pv. raphani 756C 1
Xanthomonas campestris pv. campestris str. 8004 1
Xanthomonas campestris pv. campestris str. ATCC 33913 1
Thioalkalivibrio nitratireducens DSM 14787 1
Proteus mirabilis BB2000 1
Morganella morganii subsp. morganii KT 1
Edwardsiella tarda C07-087 1
Edwardsiella tarda FL6-60 1
Rahnella aquatilis HX2 1
Yersinia pseudotuberculosis PB1/+ 1
Yersinia pseudotuberculosis YPIII 1
Yersinia pseudotuberculosis IP 32953 1
Yersinia pestis biovar Microtus str. 91001 1
Yersinia pestis A1122 1
Yersinia pestis Z176003 1
Yersinia pestis D182038 1
Yersinia pestis D106004 1
Yersinia pestis biovar Medievalis str. Harbin 35 1
Yersinia pestis Nepal516 1
Yersinia pestis Antiqua 1
Yersinia pestis Angola 1
Yersinia pestis CO92 1
Yersinia pestis KIM10+ 1
Yersinia enterocolitica subsp. palearctica 105.5R(r) 1
Yersinia enterocolitica subsp. palearctica Y11 1
Serratia sp. AS13 1
Serratia plymuthica S13 1
Serratia plymuthica 4Rx13 1
Serratia marcescens FGI94 1
Serratia marcescens WW4 1
Serratia liquefaciens ATCC 27592 1
Dickeya dadantii Ech586 1
Dickeya dadantii 3937 1
Pectobacterium carotovorum subsp. carotovorum PCC21 1
Pantoea ananatis LMG 5342 1
Pantoea ananatis PA13 1
Pantoea ananatis AJ13355 1
Erwinia pyrifoliae DSM 12163 1
Erwinia amylovora CFBP1430 1
Cronobacter sakazakii CMCC 45402 1
Cronobacter sakazakii SP291 1
Cronobacter sakazakii ATCC BAA-894 1
Raoultella ornithinolytica B6 1
Shigella sonnei 53G 1
Shigella flexneri 2002017 1
Shigella flexneri 2a str. 2457T 1
Shigella flexneri 2a str. 301 1
Shigella boydii Sb227 1
Salmonella bongori N268-08 1
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 1
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 1
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 1
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 1
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 1
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 1
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 1
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 1
Salmonella enterica subsp. enterica serovar Newport str. SL254 1
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 1
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 1
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 1
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 1
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 1
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 1
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 1
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 1
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 1
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 1
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 1
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 1
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 1
Salmonella enterica subsp. enterica serovar Typhi str. CT18 1
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 1
Salmonella enterica serovar Bovismorbificans genomics 1
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 1
Salmonella enterica subsp. enterica serovar Agona str. 24249 1
Salmonella enterica subsp. enterica serovar Agona str. SL483 1
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 1
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 1
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 1
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 1
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 1
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 1
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 1
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 1
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 1
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 1
Klebsiella oxytoca KCTC 1686 1
Klebsiella pneumoniae JM45 1
Klebsiella pneumoniae CG43 1
Klebsiella pneumoniae KCTC 2242 1
Klebsiella pneumoniae 342 1
Klebsiella pneumoniae subsp. pneumoniae 1084 1
Klebsiella pneumoniae subsp. pneumoniae HS11286 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 1
Enterobacter aerogenes EA1509E 1
Escherichia coli E24377A 1
Escherichia coli E. coli PMV-1 1
Escherichia coli JJ1886 1
Escherichia coli LY180 1
Escherichia coli APEC O78 1
Escherichia coli O7:K1 str. CE10 1
Escherichia coli O104:H4 str. 2009EL-2050 1
Escherichia coli O104:H4 str. 2009EL-2071 1
Escherichia coli O104:H4 str. 2011C-3493 1
Escherichia coli NA114 1
Escherichia coli P12b 1
Escherichia coli str. 'clone D i2' 1
Escherichia coli str. 'clone D i14' 1
Escherichia coli UM146 1
Escherichia coli 042 1
Escherichia coli Xuzhou21 1
Escherichia coli IHE3034 1
Escherichia coli UMNK88 1
Escherichia coli O83:H1 str. NRG 857C 1
Escherichia coli ABU 83972 1
Escherichia coli KO11FL 1
Escherichia coli KO11FL 1
Escherichia coli LF82 1
Escherichia coli ED1a 1
Escherichia coli IAI39 1
Escherichia coli UMN026 1
Escherichia coli 55989 1
Escherichia coli S88 1
Escherichia coli IAI1 1
Escherichia coli W 1
Escherichia coli W 1
Escherichia coli DH1 1
Escherichia coli DH1 1
Escherichia coli ATCC 8739 1
Escherichia coli BL21(DE3) 1
Escherichia coli BL21(DE3) 1
Escherichia coli SMS-3-5 1
Escherichia coli SE15 1
Escherichia coli SE11 1
Escherichia coli APEC O1 1
Escherichia coli O103:H2 str. 12009 1
Escherichia coli UTI89 1
Escherichia coli 536 1
Escherichia coli HS 1
Escherichia coli ETEC H10407 1
Escherichia coli O55:H7 str. RM12579 1
Escherichia coli O55:H7 str. CB9615 1
Escherichia coli O26:H11 str. 11368 1
Escherichia coli CFT073 1
Escherichia coli O111:H- str. 11128 1
Escherichia coli O127:H6 str. E2348/69 1
Escherichia coli O157:H7 str. TW14359 1
Escherichia coli O157:H7 str. EC4115 1
Escherichia coli O157:H7 str. Sakai 1
Escherichia coli O157:H7 str. EDL933 1
Escherichia coli str. K-12 substr. MDS42 1
Escherichia coli BW2952 1
Escherichia coli str. K-12 substr. MG1655 1
Escherichia coli str. K-12 substr. W3110 1
Escherichia coli str. K-12 substr. DH10B 1
Escherichia coli B str. REL606 1
Enterobacter cloacae SCF1 1
Enterobacter cloacae EcWSU1 1
Enterobacter cloacae subsp. cloacae ENHKU01 1
Enterobacter cloacae subsp. cloacae NCTC 9394 1
Enterobacter cloacae subsp. cloacae ATCC 13047 1
Azotobacter vinelandii CA6 1
Azotobacter vinelandii CA 1
Pseudomonas denitrificans ATCC 13867 1
Pseudomonas syringae pv. phaseolicola 1448A 1
Pseudomonas syringae pv. syringae B728a 1
Pseudomonas stutzeri CCUG 29243 1
Pseudomonas stutzeri DSM 10701 1
Pseudomonas stutzeri DSM 4166 1
Pseudomonas stutzeri RCH2 1
Pseudomonas stutzeri ATCC 17588 = LMG 11199 1
Pseudomonas monteilii SB3101 1
Pseudomonas monteilii SB3078 1
Pseudomonas putida H8234 1
Pseudomonas putida HB3267 1
Pseudomonas putida NBRC 14164 1
Pseudomonas putida DOT-T1E 1
Pseudomonas putida S16 1
Pseudomonas putida BIRD-1 1
Pseudomonas putida W619 1
Pseudomonas putida ND6 1
Pseudomonas putida KT2440 1
Pseudomonas putida GB-1 1
Pseudomonas protegens CHA0 1
Pseudomonas poae RE*1-1-14 1
Pseudomonas fluorescens F113 1
Pseudomonas fluorescens A506 1
Pseudomonas fluorescens R124 1
Pseudomonas fluorescens Pf0-1 1
Pseudomonas resinovorans NBRC 106553 1
Pseudomonas mendocina NK-01 1
Pseudomonas aeruginosa SCV20265 1
Pseudomonas aeruginosa MTB-1 1
Pseudomonas aeruginosa LES431 1
Pseudomonas aeruginosa RP73 1
Pseudomonas aeruginosa B136-33 1
Pseudomonas aeruginosa PA1R 1
Pseudomonas aeruginosa PA1 1
Pseudomonas aeruginosa DK2 1
Pseudomonas aeruginosa NCGM2.S1 1
Pseudomonas aeruginosa M18 1
Pseudomonas aeruginosa LESB58 1
Pseudomonas aeruginosa PA7 1
Pseudomonas aeruginosa PAO1 1
Acinetobacter genomosp. 13TU RUH2624 1
Acinetobacter sp. SH024 1
Acinetobacter calcoaceticus ruh2202 1
Acinetobacter baumannii ZW85-1 1
Acinetobacter baumannii TYTH-1 1
Acinetobacter baumannii BJAB0868 1
Acinetobacter baumannii BJAB0715 1
Acinetobacter baumannii BJAB07104 1
Acinetobacter baumannii TCDC-AB0715 1
Acinetobacter baumannii D1279779 1
Acinetobacter baumannii MDR-TJ 1
Acinetobacter baumannii 1656-2 1
Acinetobacter baumannii AB307-0294 1
Acinetobacter baumannii AYE 1
Acinetobacter baumannii SDF 1
Acinetobacter baumannii MDR-ZJ06 1
Acinetobacter baumannii AB0057 1
Acinetobacter baumannii ACICU 1
Acinetobacter radioresistens SH164 1
Acinetobacter junii SH205 1
Acinetobacter johnsonii SH046 1
Acinetobacter lwoffii SH145 1
Methylophaga sp. JAM7 1
Cycloclasticus zancles 7-ME 1
Francisella tularensis subsp. mediasiatica FSC147 1
Francisella tularensis subsp. holarctica F92 1
Francisella tularensis subsp. holarctica FTNF002-00 1
Francisella tularensis subsp. holarctica OSU18 1
Francisella tularensis subsp. holarctica LVS 1
Francisella tularensis subsp. holarctica FSC200 1
Francisella tularensis subsp. tularensis TIGB03 1
Francisella tularensis subsp. tularensis TI0902 1
Francisella tularensis subsp. tularensis NE061598 1
Francisella tularensis subsp. tularensis FSC198 1
Francisella tularensis subsp. tularensis SCHU S4 1
Francisella cf. novicida Fx1 1
Genome Number
Genome Number
simLC - Simulated Low Complexity Metagenome 3
simMC - Simulated Medium Complexity Metagenome 4
simHC - Simulated High Complexity Metagenome 3
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 2
Uranium Contaminated Groundwater FW106 1
Olavius algarvensis endosymbiont metagenome Delta4 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex 1
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment 1
2_050719S 1
The Salmonella enterica Pan-genome 30
Dump bottom (Dump bottom) 1
Fungus garden combined (combined) 4
Methylotrophic community from Lake Washington sediment combined (v2) 3
Cyphomyrmex longiscapus fungus garden 3
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer 2
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) 2
Sludge/Australian, Phrap Assembly 1
Oak Ridge Pristine Groundwater FRC FW301 1
Methylotrophic community from Lake Washington sediment Methane enrichment 1
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 1
5_050719P 1
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top 6
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 1
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) 4
Soil microbial communities from Minnesota Farm 3
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 3
Atta cephalotes fungus garden (ACEF) 3
Human Gut Community Subject 7 2
4_050719Q 2
Olavius algarvensis endosymbiont metagenome Gamma3 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime 1
Methylotrophic community from Lake Washington sediment Formate enrichment 1
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) 1
Global Ocean Sampling Expedition (GOS) 142
Dump top (Dump top) 1
Air microbial communities Singapore indoor air filters 2 1
Combined 4
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) 3
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring 2
Genome Number