Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

Ribonuclease H-like View domain combination »

Genome Number
Homo sapiens 76_38 209
Pan troglodytes 76_2.1.4 59
Gorilla gorilla 76_3.1 89
Pongo abelii 76_2 63
Tarsius syrichta 76_1 39
Nomascus leucogenys 76_1.0 69
Papio anubis 76 59
Macaca mulatta 76_1 93
Callithrix jacchus 76_3.2.1 119
Otolemur garnettii 76_3 58
Microcebus murinus 76_1 45
Physcomitrella patens subsp. patens 22 73
Rattus norvegicus 76_5.0 60
Mus musculus 76_38 114
Dipodomys ordii 76_1 42
Ictidomys tridecemlineatus 76_2 59
Heterocephalus glaber v1.7-2 57
Cavia porcellus 76_3 56
Oryctolagus cuniculus 76_2 57
Ochotona princeps 76 42
Tupaia belangeri 76 41
Sus scrofa 76_10.2 63
Bos taurus 76_3.1 59
Ovis aries 76_3.1 103
Vicugna pacos 76_1 33
Tursiops truncatus 76_1 52
Mustela putorius furo 76_1.0 62
Ailuropoda melanoleuca 76_1 62
Canis familiaris 76_3.1 75
Felis catus 76_6.2 94
Equus caballus 76_2 67
Myotis lucifugus 76_2.0 64
Pteropus vampyrus 76_1 53
Sorex araneus 76_1 38
Erinaceus europaeus 76 35
Procavia capensis 76_1 49
Loxodonta africana 76_3 61
Echinops telfairi 76 36
Dasypus novemcinctus 76_2 71
Choloepus hoffmanni 76_1 36
Macropus eugenii 76_1.0 44
Sarcophilus harrisii 76_7.0 60
Monodelphis domestica 76_5 143
Ornithorhynchus anatinus 76_5 54
Saccoglossus kowalevskii v3.0 228
Petromyzon marinus 76_7.0 38
Meleagris gallopavo 76_2 45
Gallus gallus 76_4 45
Anas platyrhynchos 76_1.0 46
Taeniopygia guttata 76_3.2.4 59
Ficedula albicollis 76_1.0 44
Pelodiscus sinensis 76_1.0 270
Anolis carolinensis 76_2.0 142
Xenopus laevis 85
Xenopus tropicalis 76_4.2 83
Latimeria chalumnae 76_1 587
Lepisosteus oculatus 76 85
Gadus morhua 76_1 128
Tetraodon nigroviridis 76_8 59
Takifugu rubripes 76_4 117
Gasterosteus aculeatus 76_1 89
Oryzias latipes 76_1 73
Xiphophorus maculatus 76_4.4.2 67
Poecilia formosa 76 72
Oreochromis niloticus 76_1.0 171
Astyanax mexicanus 76 80
Danio rerio 76_9 134
Oikopleura dioica 89
Ciona savignyi 76_2.0 101
Ciona intestinalis 76 50
Strongylocentrotus purpuratus v3.1 503
Adineta vaga 180
Octopus bimaculoides 280 141
Crassostrea gigas 22 89
Lottia gigantea 92
Helobdella robusta 173
Capitella sp. I 153
Danaus plexippus OGS1.0 51
Heliconius melpomene 44
Bombyx mori 169
Nasonia vitripennis 297
Apis mellifera 38.2d 85
Harpegnathos saltator v3.3 173
Linepithema humile v1.1 134
Pogonomyrmex barbatus v1.2 57
Solenopsis invicta v.2.2.3 129
Acromyrmex echinatior v3.8 56
Atta cephalotes v1.1 59
Camponotus floridanus v3.3 225
Lucilia cuprina 49
Drosophila grimshawi 1.3 35
Drosophila willistoni 1.3 56
Drosophila pseudoobscura 2.13 60
Drosophila persimilis 1.3 60
Drosophila suzukii 47
Drosophila yakuba 1.3 39
Drosophila simulans 1.3 30
Drosophila sechellia 1.3 35
Drosophila melanogaster 76_5 67
Drosophila erecta 1.3 34
Drosophila ananassae 1.3 46
Drosophila virilis 1.2 37
Drosophila mojavensis 1.3 41
Megaselia scalaris 22 49
Aedes aegypti 55 42
Culex pipiens quinquefasciatus 81
Anopheles darlingi 22 35
Anopheles gambiae 49_3j 31
Tribolium castaneum 3.0 233
Pediculus humanus corporis 32
Acyrthosiphon pisum 220
Rhodnius prolixus 22 138
Daphnia pulex 178
Strigamia maritima 22 245
Sarcoptes scabiei 25
Tetranychus urticae 52
Ixodes scapularis 85
Pristionchus pacificus 105
Meloidogyne incognita 313
Meloidogyne hapla 114
Onchocerca volvulus 22 61
Brugia malayi WS250 48
Caenorhabditis japonica 268
Caenorhabditis brenneri 318
Caenorhabditis remanei 398
Caenorhabditis elegans 76_235 122
Caenorhabditis briggsae 2 154
Trichinella spiralis 22 271
Hymenolepis microstoma 78
Echinococcus multilocularis 45
Echinococcus granulosus 29
Taenia solium 68
Schistosoma mansoni 40
Mnemiopsis leidyi 135
Thelohanellus kitauei 424
Acropora digitifera v1.0 291
Nematostella vectensis 1.0 85
Hydra vulgaris 992
Amphimedon queenslandica 680
Trichoplax adhaerens 38
Proterospongia sp. ATCC 50818 23
Monosiga brevicollis 26
Sphaeroforma arctica JP610 57
Capsaspora owczarzaki ATCC 30864 26
Conidiobolus coronatus NRRL28638 v1.0 16
Mortierella verticillata NRRL 6337 41
Phycomyces blakesleeanus 38
Rhizopus oryzae RA 99-880 331
Mucor circinelloides 31
Rhizomucor miehei CAU432 52
Malassezia globosa CBS 7966 38
Sporisorium reilianum 22 24
Ustilago maydis 40
Mixia osmundae IAM 14324 v1.0 24
Cronartium quercuum f. sp. fusiforme G11 v1.0 103
Puccinia graminis f. sp. tritici CRL 75-36-700-3 349
Melampsora laricis-populina 49
Rhodotorula graminis WP1 v1.0 25
Sporobolomyces roseus IAM 13481 17
Microbotryum violaceum 22 31
Wallemia sebi v1.0 28
Sphaerobolus stellatus v1.0 234
Piloderma croceum F 1598 v1.0 132
Serpula lacrymans var. lacrymans S7.9 48
Coniophora puteana 82
Hydnomerulius pinastri v2.0 57
Paxillus rubicundulus Ve08.2h10 v1.0 280
Pisolithus microcarpus 441 v1.0 268
Pisolithus tinctorius Marx 270 v1.0 108
Scleroderma citrinum Foug A v1.0 333
Coprinopsis cinerea okayama7 130 v3 40
Pleurotus ostreatus 44
Amanita thiersii Skay4041 v1.0 34
Amanita muscaria Koide v1.0 163
Galerina marginata v1.0 135
Hebeloma cylindrosporum h7 v2.0 79
Laccaria bicolor S238N-H82 150
Agaricus bisporus var. bisporus 68
Schizophyllum commune 76
Stereum hirsutum FP-91666 SS1 v1.0 89
Heterobasidion annosum 64
Gloeophyllum trabeumv1.0 76
Punctularia strigosozonata v1.0 72
Sebacina vermifera MAFF 305830 v1.0 50
Fomitiporia mediterranea v1.0 52
Tulasnella calospora AL13/4D v1.0 81
Postia placenta 65
Wolfiporia cocos MD-104 SS10 v1.0 91
Fomitopsis pinicolav1.0 103
Fomitopsis pinicola FP-58527 SS1 v3.0 78
Phanerochaete chrysosporium RP-78 2.1 161
Dichomitus squalens 63
Trametes versicolor v1.0 117
Tremella mesenterica 37
Daldinia eschscholzii EC12 v1.0 31
Apiospora montagnei NRRL 25634 v1.0 50
Magnaporthe poae ATCC 64411 22 21
Magnaporthe grisea 70-15 28
Podospora anserina 33
Sporotrichum thermophile ATCC 42464 29
Thielavia terrestris NRRL 8126 33
Chaetomium globosum CBS 148.51 137
Neurospora tetrasperma 29
Neurospora discreta FGSC 8579 24
Neurospora crassa OR74A 29
Cryphonectria parasitica 27
Verticillium albo-atrum VaMs.102 28
Verticillium dahliae VdLs.17 25
Acremonium alcalophilumv 1.0 44
Glomerella graminicola 22 31
Fusarium graminearum 26
Nectria haematococca mpVI 42
Fusarium oxysporum f. sp. lycopersici 4286 167
Fusarium verticillioides 7600 26
Trichoderma asperellum CBS 433.97 v1.0 35
Trichoderma atroviride 30
Trichoderma citrinoviride v1.0 28
Trichoderma reesei 1.2 29
Trichoderma virens Gv29-8 32
Trichoderma longibrachiatum ATCC 18648 v1.0 29
Trichoderma harzianum CBS 226.95 v1.0 41
Amorphotheca resinae v1.0 26
Botrytis cinerea B05.10 63
Sclerotinia sclerotiorum 130
Blumeria graminis 22 43
Didymella exigua CBS 183.55 v1.0 37
Leptosphaeria maculans 22 31
Setosphaeria turcica v1.0 41
Cochliobolus miyabeanus ATCC 44560 v1.0 3
Cochliobolus victoriae FI3 v1.0 6
Cochliobolus carbonum 26-R-13 v1.0 7
Cochliobolus heterostrophus 34
Alternaria brassicicola 43
Cochliobolus lunatus m118 v2.0 2
Pyrenophora teres f. teres 22 94
Pyrenophora tritici-repentis 93
Stagonospora nodorum 46
Microsporum gypseum 24
Mycosphaerella graminicola IPO323 47
Zasmidium cellare ATCC 36951 v1.0 6
Dothistroma septosporum 37
Septoria musiva v1.0 34
Mycosphaerella fijiensis CIRAD86 39
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 29
Paracoccidioides brasiliensis Pb18 28
Coccidioides posadasii RMSCC 3488 29
Coccidioides immitis RS 25
Ajellomyces dermatitidis SLH14081 28
Histoplasma capsulatum class NAmI strain WU24 33
Microsporum canis CBS 113480 22
Trichophyton equinum CBS 127.97 24
Trichophyton verrucosum HKI 0517 27
Arthroderma benhamiae CBS 112371 26
Trichophyton tonsurans CBS 112818 28
Trichophyton rubrum CBS 118892 28
Uncinocarpus reesii 1704 28
Aspergillus zonatus v1.0 28
Penicillium chrysogenum Wisconsin 54-1255 63
Penicillium chrysogenum v1.0 47
Aspergillus acidus v1.0 34
Aspergillus fumigatus Af293 54
Aspergillus brasiliensis v1.0 28
Aspergillus nidulans FGSC A4 23
Aspergillus sydowii v1.0 30
Aspergillus versicolor v1.0 28
Aspergillus glaucus 34
Aspergillus carbonarius ITEM 5010 31
Neosartorya fischeri NRRL 181 28
Aspergillus terreus NIH2624 38
Aspergillus tubingensis v1.0 30
Aspergillus wentii v1.0 25
Aspergillus oryzae RIB40 33
Aspergillus niger 22 56
Aspergillus niger ATCC 1015 19
Aspergillus flavus NRRL3357 29
Aspergillus clavatus NRRL 1 25
Penicillium marneffei ATCC 18224 113
Tuber melanosporum Mel28 22 29
Tuber melanosporum Vittad 834
Hansenula polymorpha v2.0 19
Dekkera bruxellensis CBS 2499 v2.0 22
Pichia membranifaciensv1.0 20
Candida tanzawaensis NRRL Y-17324 v1.0 20
Candida dubliniensis CD36 34
Candida tropicalis MYA-3404 26
Candida parapsilosis 21
Candida albicans SC5314 30
Lodderomyces elongisporus NRRL YB-4239 49
Babjeviella inositovora NRRL Y-12698 v1.0 19
Pichia stipitis CBS 6054 21
Candida guilliermondii ATCC 6260 22
Hyphopichia burtonii NRRL Y-1933 v1.0 21
Debaromyces hansenii 26
Wickerhamomyces anomalus 25
Pichia pastoris GS115 16
Hanseniaspora valbyensis NRRL Y-1626 v1.1 19
Yarrowia lipolytica CLIB122 50
Candida lusitaniae ATCC 42720 24
Metschnikowia bicuspidata NRRL YB-4993 v1.0 20
Vanderwaltozyma polyspora DSM 70294 47
Candida glabrata CBS138 19
Kluyveromyces thermotolerans CBS 6340 19
Lachancea kluyveri 25
Kluyveromyces waltii 57
Ashbya gossypii ATCC 10895 18
Zygosaccharomyces rouxii 18
Saccharomyces mikatae MIT 32
Saccharomyces paradoxus MIT 28
Saccharomyces cerevisiae 76 64
Saccharomyces bayanus MIT 34
Kluyveromyces lactis 18
Schizosaccharomyces cryophilus OY26 22 23
Schizosaccharomyces octosporus yFS286 21
Schizosaccharomyces japonicus yFS275 22
Schizosaccharomyces pombe 32
Catenaria anguillulae PL171 v1.0 122
Allomyces macrogynus ATCC 38327 68
Spizellomyces punctatus DAOM BR117 63
Dictyostelium discoideum 66
Dictyostelium purpureum 58
Entamoeba dispar 1.2 26
Entamoeba invadens 1.2 60
Entamoeba histolytica 1 22
Selaginella moellendorffii 89
Pinus taeda 186
Picea abies 89
Eucalyptus grandis v201 139
Theobroma cacao B97-61/B2 v1 5064
Gossypium raimondii v221 382
Citrus clementina v165 230
Citrus sinensis v154 228
Thellungiella halophila v173 184
Brassica rapa Chiifu-401 1.2 126
Capsella rubella v183 149
Arabidopsis lyrata 133
Arabidopsis thaliana 10 175
Carica papaya 87
Medicago truncatula 126
Phaseolus vulgaris v186 153
Glycine max v109 292
Cucumis sativus v122 213
Fragaria vesca 514
Malus domestica v196 325
Prunus persica v139 458
Linum usitatissimum v200 155
Manihot esculenta v147 123
Populus trichocarpa v156 290
Vitis vinifera 81
Mimulus guttatus v140 137
Solanum lycopersicum v.2.3 228
Solanum tuberosum 249
Actinidia chinensis Hongyang 308
Aquilegia coerulea v195 263
Triticum urartu 22 169
Triticum aestivum 22 707
Aegilops tauschii 22 164
Brachypodium distachyon 307
Oryza barthii 22 132
Oryza meridionalis 22 144
Oryza glumaepatula 22 145
Oryza glaberrima 185
Oryza punctata 22 148
Oryza nivara 22 157
Oryza brachyantha 22 158
Oryza sativa ssp. japonica 5.0 4202
Oryza sativa v193 4160
Phyllostachys heterocyclavar. pubescens 116
Panicum virgatum v202 549
Setaria italica v164 159
Zea mays subsp. mays 184
Zea mays v181 202
Sorghum bicolor 454
Musa balbisiana 1625
Musa acuminata 22 110
Amborella trichopoda 22 153
Physcomitrella patens 113
Coccomyxa subellipsoidea sp. C-169 v2 29
Asterochloris sp. Cgr/DA1pho v1.0 29
Chlorella variabilis sp. NC64A 37
Chlorella vulgaris 28
Volvox carteri f. nagariensis 80
Volvox carteri v199 41
Chlamydomonas reinhardtii 4.0 45
Ostreococcus sp. RCC809 24
Ostreococcus lucimarinus CCE9901 26
Ostreococcus tauri 29
Bathycoccus prasinos 25
Micromonas sp. RCC299 30
Micromonas pusilla CCMP1545 v3.0 39
Cyanidioschyzon merolae strain 10D 22 19
Cyanidioschyzon merolae 19
Porphyridium purpureum 02_2012 82
Thecamonas trahens ATCC 50062 34
Bigelowiella natans CCMP2755 22 74
Giardia lamblia 2.3 13
Cyanophora paradoxa 115
Leishmania mexicana 2.4 31
Leishmania major strain Friedlin 31
Leishmania infantum JPCM5 2.4 31
Leishmania braziliensis MHOM/BR/75/M2904 2.4 34
Trypanosoma vivax 75
Trypanosoma cruzi strain CL Brener 24
Trypanosoma congolense 2.4 68
Trypanosoma brucei gambiense v4.1 34
Trypanosoma brucei TREU927 v4.1 31
Ectocarpus siliculosus 58
Aureococcus anophagefferens 33
Albugo laibachii 22 150
Pythium iwayamai DAOM BR242034 22 97
Pythium arrhenomanes ATCC 12531 22 150
Pythium ultimum v1.7-2 152
Pythium aphanidermatum DAOM BR444 22 76
Pythium irregulare DAOM BR486 22 50
Pythium vexans DAOM BR484 22 58
Phytophthora ramorum 1.1 469
Phytophthora sojae 1.1 1016
Phytophthora infestans T30-4 393
Phytophthora capsici 184
Hyaloperonospora arabidopsidis 22 48
Phaeodactylum tricornutumCCAP 1055/1 115
Fragilariopsis cylindrus 135
Thalassiosira pseudonana CCMP1335 53
Perkinsus marinus ATCC 50983 414
Paramecium tetraurelia 58
Tetrahymena thermophila SB210 1 52
Ichthyophthirius multifiliis strain G5 17
Cryptosporidium hominis 7
Cryptosporidium muris 10
Cryptosporidium parvum Iowa II 9
Neospora caninum 21
Toxoplasma gondii VEG 19
Toxoplasma gondii ME49 22
Toxoplasma gondii GT1 19
Babesia bovis T2Bo 28
Theileria parva 11
Theileria annulata 12
Plasmodium falciparum 3D7 16
Plasmodium vivax SaI-1 7.0 16
Plasmodium knowlesi strain H 16
Plasmodium yoelii ssp. yoelii 1 16
Plasmodium chabaudi 15
Plasmodium berghei ANKA 15
Symbiodinium minutum clade B1 v1.2 829
Naegleria gruberi 49
Trichomonas vaginalis 3093
Guillardia theta CCMP2712 v1.0 47
Emiliania huxleyi CCMP1516 101
Acholeplasma laidlawii PG-8A 10
Genome Number
Thermobaculum terrenum ATCC BAA-798 7
Leptolyngbya sp. PCC 7376 57
Pseudanabaena sp. PCC 7367 22
Acaryochloris marina MBIC11017 144
Synechocystis sp. PCC 6803 33
Thermosynechococcus sp. NK55 7
Thermosynechococcus elongatus BP-1 27
Synechococcus sp. PCC 7502 23
Synechococcus sp. PCC 6312 11
Synechococcus sp. CC9311 9
Synechococcus elongatus PCC 7942 10
Prochlorococcus marinus str. MIT 9515 9
Microcoleus sp. PCC 7113 30
Trichodesmium erythraeum IMS101 59
Geitlerinema sp. PCC 7407 12
Cyanothece sp. PCC 8802 19
Gloeocapsa sp. PCC 7428 14
cyanobacterium UCYN-A 6
Halothece sp. PCC 7418 10
Microcystis aeruginosa NIES-843 92
Gloeobacter violaceus PCC 7421 30
Rivularia sp. PCC 7116 17
Calothrix sp. PCC 7507 31
Anabaena variabilis ATCC 29413 36
'Nostoc azollae' 0708 13
Nostoc sp. PCC 7107 29
Nostoc punctiforme PCC 73102 57
Nostoc sp. PCC 7120 14
Nostoc sp. PCC 7524 26
Anabaena sp. 90 18
Candidatus Phytoplasma mali 5
Aster yellows witches'-broom phytoplasma AYWB 15
Onion yellows phytoplasma OY-M 16
Mesoplasma florum L1 5
Ureaplasma parvum serovar 3 str. ATCC 27815 7
Ureaplasma urealyticum serovar 10 str. ATCC 33699 6
Mycoplasma leachii 99/014/6 13
Mycoplasma mycoides subsp. capri LC str. 95010 28
Mycoplasma capricolum subsp. capricolum ATCC 27343 7
Mycoplasma haemocanis str. Illinois 4
Mycoplasma wenyonii str. Massachusetts 2
Mycoplasma suis KI3806 2
Mycoplasma crocodyli MP145 5
Mycoplasma conjunctivae HRC/581 8
Mycoplasma haemofelis Ohio2 4
Mycoplasma bovis HB0801 45
Mycoplasma penetrans HF-2 25
Mycoplasma putrefaciens KS1 5
Mycoplasma mobile 163K 5
Mycoplasma fermentans M64 13
Mycoplasma arthritidis 158L3-1 5
Mycoplasma agalactiae PG2 5
Mycoplasma synoviae 53 9
Mycoplasma pulmonis UAB CTIP 8
Mycoplasma pneumoniae 309 3
Mycoplasma hyorhinis GDL-1 5
Mycoplasma hyopneumoniae 168 16
Mycoplasma hominis ATCC 23114 5
Mycoplasma genitalium G37 2
Mycoplasma gallisepticum str. F 3
Conexibacter woesei DSM 14684 12
Cryptobacterium curtum DSM 15641 8
Eggerthella sp. YY7918 10
Eggerthella lenta DSM 2243 12
Slackia heliotrinireducens DSM 20476 15
Olsenella uli DSM 7084 8
Atopobium parvulum DSM 20469 10
Coriobacterium glomerans PW2 7
Rubrobacter xylanophilus DSM 9941 12
Ilumatobacter coccineus 11
Acidimicrobium ferrooxidans DSM 10331 28
Thermobispora bispora DSM 43833 10
Nakamurella multipartita DSM 44233 65
Acidothermus cellulolyticus 11B 10
Modestobacter marinus 29
Blastococcus saxobsidens DD2 35
Geodermatophilus obscurus DSM 43160 19
Kineococcus radiotolerans SRS30216 14
Catenulispora acidiphila DSM 44928 15
Stackebrandtia nassauensis DSM 44728 12
Frankia symbiont of Datisca glomerata 125
Frankia sp. EAN1pec 97
Frankia alni ACN14a 18
Thermobifida fusca YX 13
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 17
Thermomonospora curvata DSM 43183 14
Streptosporangium roseum DSM 43021 27
Kitasatospora setae KM-6054 39
Streptomyces coelicolor A3(2) 30
Streptomyces sp. PAMC26508 15
Streptomyces flavogriseus ATCC 33331 26
Streptomyces sp. SirexAA-E 15
Streptomyces griseus subsp. griseus NBRC 13350 19
Streptomyces bingchenggensis BCW-1 72
Streptomyces violaceusniger Tu 4113 51
Streptomyces avermitilis MA-4680 38
Streptomyces cattleya NRRL 8057 = DSM 46488 30
Streptomyces scabiei 87.22 38
Streptomyces hygroscopicus subsp. jinggangensis 5008 77
Actinosynnema mirum DSM 43827 21
Saccharomonospora viridis DSM 43017 11
Pseudonocardia dioxanivorans CB1190 46
Saccharopolyspora erythraea NRRL 2338 61
Amycolatopsis mediterranei U32 31
Kribbella flavida DSM 17836 10
Nocardioides sp. JS614 23
Propionibacterium propionicum F0230a 16
Propionibacterium acnes SK137 10
Microlunatus phosphovorus NM-1 60
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 43
Salinispora arenicola CNS-205 26
Salinispora tropica CNB-440 26
Verrucosispora maris AB-18-032 24
Micromonospora sp. L5 19
Micromonospora aurantiaca ATCC 27029 30
Actinoplanes sp. N902-109 23
Actinoplanes sp. SE50/110 29
Actinoplanes missouriensis 431 29
Segniliparus rotundus DSM 44985 13
Tsukamurella paurometabola DSM 20162 43
Gordonia sp. KTR9 30
Gordonia polyisoprenivorans VH2 26
Gordonia bronchialis DSM 43247 63
Rhodococcus jostii RHA1 66
Rhodococcus equi 103S 12
Rhodococcus opacus B4 50
Rhodococcus erythropolis PR4 35
Nocardia cyriacigeorgica GUH-2 16
Nocardia farcinica IFM 10152 23
Amycolicicoccus subflavus DQS3-9A1 15
Mycobacterium massiliense str. GO 06 10
Mycobacterium abscessus ATCC 19977 16
Mycobacterium sp. JLS 40
Mycobacterium intracellulare ATCC 13950 30
Mycobacterium avium 104 38
Mycobacterium vanbaalenii PYR-1 49
Mycobacterium canettii CIPT 140010059 36
Mycobacterium africanum GM041182 23
Mycobacterium tuberculosis KZN 1435 31
Mycobacterium tuberculosis 27
Mycobacterium bovis BCG str. Pasteur 1173P2 17
Mycobacterium rhodesiae NBB3 30
Mycobacterium ulcerans Agy99 17
Mycobacterium gilvum PYR-GCK 59
Mycobacterium chubuense NBB4 37
Mycobacterium marinum M 35
Mycobacterium smegmatis str. MC2 155 44
Mycobacterium leprae Br4923 7
Corynebacterium resistens DSM 45100 33
Corynebacterium aurimucosum ATCC 700975 51
Corynebacterium kroppenstedtii DSM 44385 13
Corynebacterium efficiens YS-314 53
Corynebacterium ulcerans 0102 12
Corynebacterium urealyticum DSM 7109 33
Corynebacterium jeikeium K411 50
Corynebacterium variabile DSM 44702 37
Corynebacterium pseudotuberculosis 316 12
Corynebacterium glutamicum R 21
Corynebacterium diphtheriae NCTC 13129 32
Tropheryma whipplei TW08/27 5
Sanguibacter keddieii DSM 10542 12
Kytococcus sedentarius DSM 20547 25
Beutenbergia cavernae DSM 12333 9
Leifsonia xyli subsp. xyli str. CTCB07 32
Microbacterium testaceum StLB037 16
Clavibacter michiganensis subsp. michiganensis NCPPB 382 10
Jonesia denitrificans DSM 20603 9
Intrasporangium calvum DSM 43043 18
Brachybacterium faecium DSM 4810 12
Isoptericola variabilis 225 15
Xylanimonas cellulosilytica DSM 15894 15
Cellulomonas flavigena DSM 20109 23
Cellulomonas fimi ATCC 484 19
[Cellvibrio] gilvus ATCC 13127 27
Arthrobacter phenanthrenivorans Sphe3 46
Arthrobacter chlorophenolicus A6 18
Arthrobacter aurescens TC1 23
Arthrobacter arilaitensis Re117 46
Kocuria rhizophila DC2201 16
Rothia mucilaginosa DY-18 10
Rothia dentocariosa ATCC 17931 11
Arthrobacter sp. Rue61a 14
Arthrobacter sp. FB24 16
Renibacterium salmoninarum ATCC 33209 89
Micrococcus luteus NCTC 2665 23
Gardnerella vaginalis 409-05 10
Bifidobacterium longum subsp. longum JDM301 30
Bifidobacterium animalis subsp. lactis Bl-04 9
Bifidobacterium dentium Bd1 18
Bifidobacterium breve ACS-071-V-Sch8b 13
Bifidobacterium bifidum S17 16
Bifidobacterium adolescentis ATCC 15703 18
Arcanobacterium haemolyticum DSM 20595 20
Mobiluncus curtisii ATCC 43063 20
Actinomyces sp. F0330 20
Caldilinea aerophila DSM 14535 = NBRC 104270 13
Dehalococcoides ethenogenes 195 7
Dehalococcoides sp. BAV1 14
Dehalogenimonas lykanthroporepellens BL-DC-9 21
Anaerolinea thermophila UNI-1 16
Thermomicrobium roseum DSM 5159 9
Sphaerobacter thermophilus DSM 20745 12
Herpetosiphon aurantiacus DSM 785 43
Roseiflexus sp. RS-1 16
Roseiflexus castenholzii DSM 13941 19
Chloroflexus sp. MS-G 9
Chloroflexus sp. Y-400-fl 12
Chloroflexus aggregans DSM 9485 9
Chloroflexus aurantiacus J-10-fl 12
Truepera radiovictrix DSM 17093 10
Deinococcus gobiensis I-0 43
Deinococcus deserti VCD115 22
Deinococcus maricopensis DSM 21211 11
Deinococcus geothermalis DSM 11300 49
Deinococcus proteolyticus MRP 24
Deinococcus radiodurans R1 30
Oceanithermus profundus DSM 14977 8
Marinithermus hydrothermalis DSM 14884 22
Meiothermus silvanus DSM 9946 119
Meiothermus ruber DSM 1279 10
Thermus sp. CCB_US3_UF1 22
Thermus scotoductus SA-01 21
Thermus thermophilus HB27 24
Anaerococcus prevotii DSM 20548 8
Finegoldia magna ATCC 29328 10
Veillonella parvula DSM 2008 9
Megasphaera elsdenii DSM 20460 23
Acidaminococcus intestini RyC-MR95 26
Acidaminococcus fermentans DSM 20731 16
Megamonas hypermegale 10
Selenomonas sputigena ATCC 35185 21
Selenomonas ruminantium subsp. lactilytica TAM6421 25
Erysipelothrix rhusiopathiae str. Fujisawa 34
Natranaerobius thermophilus JW/NM-WN-LF 30
Symbiobacterium thermophilum IAM 14863 39
Clostridiales genomosp. BVAB3 str. UPII9-5 8
Clostridium clariflavum DSM 19732 61
Eubacterium siraeum 9
Clostridium cellulolyticum H10 63
Clostridium thermocellum ATCC 27405 57
Ethanoligenens harbinense YUAN-3 11
Faecalibacterium prausnitzii 4
Ruminococcus sp. 8
Ruminococcus bromii 6
Ruminococcus albus 7 16
Thermaerobacter marianensis DSM 12885 12
Sulfobacillus acidophilus DSM 10332 42
Oscillibacter valericigenes Sjm18-20 122
butyrate-producing bacterium SS3/4 13
butyrate-producing bacterium SM4/1 4
Candidatus Desulforudis audaxviator MP104C 18
Thermincola potens JR 21
Pelotomaculum thermopropionicum SI 40
Desulfosporosinus acidiphilus SJ4 13
Desulfosporosinus orientis DSM 765 29
Dehalobacter sp. DCA 41
Dehalobacter sp. CF 41
Syntrophobotulus glycolicus DSM 8271 18
Desulfitobacterium hafniense Y51 56
Desulfitobacterium dehalogenans ATCC 51507 13
Desulfotomaculum reducens MI-1 58
Desulfotomaculum acetoxidans DSM 771 74
Desulfotomaculum kuznetsovii DSM 6115 25
Desulfotomaculum carboxydivorans CO-1-SRB 30
Desulfotomaculum ruminis DSM 2154 29
Acetobacterium woodii DSM 1030 22
Eubacterium eligens ATCC 27750 12
Eubacterium limosum KIST612 8
Clostridium difficile 630 12
Clostridium sticklandii DSM 519 13
Filifactor alocis ATCC 35896 21
Clostridium saccharolyticum WM1 21
Clostridium phytofermentans ISDg 15
Clostridium lentocellum DSM 5427 32
[Ruminococcus] obeum 7
[Ruminococcus] torques 12
Eubacterium rectale M104/1 9
Eubacterium rectale ATCC 33656 18
Coprococcus sp. ART55/1 9
Roseburia hominis A2-183 8
Roseburia intestinalis 10
Butyrivibrio proteoclasticus B316 17
Butyrivibrio fibrisolvens 9
Syntrophothermus lipocalidus DSM 12680 8
Syntrophomonas wolfei subsp. wolfei str. Goettingen 16
Heliobacterium modesticaldum Ice1 47
Alkaliphilus oremlandii OhILAs 16
Alkaliphilus metalliredigens QYMF 48
Candidatus Arthromitus sp. SFB-mouse-Japan 8
Clostridium sp. BNL1100 14
Clostridium novyi NT 9
Clostridium ljungdahlii DSM 13528 16
Clostridium kluyveri DSM 555 29
Clostridium beijerinckii NCIMB 8052 20
Clostridium tetani E88 22
Clostridium perfringens ATCC 13124 11
Clostridium cellulovorans 743B 24
Clostridium botulinum A str. ATCC 3502 12
Clostridium acetobutylicum ATCC 824 11
Mahella australiensis 50-1 BON 22
Thermosediminibacter oceani DSM 16646 20
Caldicellulosiruptor obsidiansis OB47 19
Caldicellulosiruptor kronotskyensis 2002 13
Caldicellulosiruptor hydrothermalis 108 16
Caldicellulosiruptor owensensis OL 7
Caldicellulosiruptor lactoaceticus 6A 27
Caldicellulosiruptor kristjanssonii 177R1B 35
Caldicellulosiruptor saccharolyticus DSM 8903 57
Caldicellulosiruptor bescii DSM 6725 18
Thermoanaerobacterium xylanolyticum LX-11 33
Thermoanaerobacterium thermosaccharolyticum DSM 571 16
Thermodesulfobium narugense DSM 14796 17
Coprothermobacter proteolyticus DSM 5265 6
Tepidanaerobacter acetatoxydans Re1 18
Thermoanaerobacter tengcongensis MB4 21
Carboxydothermus hydrogenoformans Z-2901 12
Moorella thermoacetica ATCC 39073 16
Ammonifex degensii KC4 21
Thermoanaerobacter mathranii subsp. mathranii str. A3 10
Thermoanaerobacter pseudethanolicus ATCC 33223 30
Thermoanaerobacter sp. X514 18
Thermoanaerobacter italicus Ab9 23
Thermoanaerobacter wiegelii Rt8.B1 32
Thermoanaerobacter brockii subsp. finnii Ako-1 24
Acetohalobium arabaticum DSM 5501 16
Halothermothrix orenii H 168 13
Halanaerobium hydrogeniformans 46
Halanaerobium praevalens DSM 2228 16
Carnobacterium sp. 17-4 9
Carnobacterium sp. WN1359 25
Aerococcus urinae ACS-120-V-Col10a 30
Tetragenococcus halophilus NBRC 12172 66
Melissococcus plutonius DAT561 6
Enterococcus sp. 7L76 11
Enterococcus hirae ATCC 9790 7
Enterococcus faecium Aus0004 38
Enterococcus faecalis 62 33
Weissella koreensis KACC 15510 8
Oenococcus oeni PSU-1 11
Leuconostoc sp. C2 11
Leuconostoc kimchii IMSNU 11154 17
Leuconostoc citreum KM20 23
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 20
Leuconostoc gasicomitatum LMG 18811 19
Lactobacillus casei ATCC 334 81
Lactobacillus kefiranofaciens ZW3 21
Lactobacillus crispatus ST1 19
Lactobacillus rhamnosus Lc 705 13
Lactobacillus johnsonii FI9785 16
Lactobacillus sanfranciscensis TMW 1.1304 39
Lactobacillus salivarius CECT 5713 14
Lactobacillus ruminis ATCC 27782 25
Lactobacillus fermentum IFO 3956 57
Lactobacillus amylovorus GRL1118 22
Lactobacillus sakei subsp. sakei 23K 20
Lactobacillus reuteri DSM 20016 28
Lactobacillus gasseri ATCC 33323 8
Lactobacillus plantarum JDM1 14
Lactobacillus helveticus DPC 4571 25
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 22
Lactobacillus buchneri NRRL B-30929 36
Lactobacillus buchneri 20
Lactobacillus brevis ATCC 367 33
Lactobacillus acidophilus 30SC 35
Pediococcus claussenii ATCC BAA-344 15
Pediococcus pentosaceus ATCC 25745 10
Lactococcus garvieae ATCC 49156 20
Lactococcus lactis subsp. cremoris MG1363 43
Streptococcus sp. I-P16 14
Streptococcus sp. I-G2 11
Streptococcus intermedius JTH08 9
Streptococcus gallolyticus UCN34 14
Streptococcus pseudopneumoniae IS7493 18
Streptococcus pasteurianus ATCC 43144 13
Streptococcus equi subsp. equi 4047 59
Streptococcus dysgalactiae subsp. equisimilis GGS_124 47
Streptococcus infantarius subsp. infantarius CJ18 33
Streptococcus macedonicus ACA-DC 198 41
Streptococcus mitis B6 55
Streptococcus uberis 0140J 8
Streptococcus parauberis KCTC 11537 14
Streptococcus parasanguinis ATCC 15912 10
Streptococcus pyogenes str. Manfredo 19
Streptococcus pneumoniae P1031 21
Streptococcus agalactiae A909 20
Streptococcus mutans NN2025 13
Streptococcus thermophilus LMD-9 21
Streptococcus suis P1/7 16
Streptococcus sanguinis SK36 9
Streptococcus salivarius 57.I 20
Streptococcus oralis Uo5 9
Streptococcus gordonii str. Challis substr. CH1 7
Exiguobacterium sp. MH3 10
Exiguobacterium sp. AT1b 12
Exiguobacterium sibiricum 255-15 25
Kyrpidia tusciae DSM 2912 22
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 28
Brevibacillus brevis NBRC 100599 19
Paenibacillus sp. JDR-2 16
Paenibacillus terrae HPL-003 22
Paenibacillus mucilaginosus 3016 32
Paenibacillus polymyxa M1 26
Bacillus selenitireducens MLS10 22
Listeria welshimeri serovar 6b str. SLCC5334 10
Listeria innocua Clip11262 21
Listeria seeligeri serovar 1/2b str. SLCC3954 8
Listeria monocytogenes serotype 4b str. CLIP 80459 8
Listeria ivanovii subsp. ivanovii PAM 55 9
Solibacillus silvestris StLB046 14
Geobacillus thermoglucosidasius C56-YS93 41
Lysinibacillus sphaericus C3-41 19
Oceanobacillus iheyensis HTE831 11
Anoxybacillus flavithermus WK1 40
Geobacillus thermoleovorans CCB_US3_UF5 37
Geobacillus kaustophilus HTA426 40
Geobacillus sp. GHH01 42
Geobacillus sp. WCH70 60
Geobacillus thermodenitrificans NG80-2 23
Halobacillus halophilus DSM 2266 28
Bacillus sp. JS 11
butyrate-producing bacterium SSC/2 10
Bacillus sp. 1NLA3E 30
Bacillus amyloliquefaciens FZB42 15
Bacillus atrophaeus 1942 14
Bacillus subtilis subsp. subtilis str. 168 11
Bacillus licheniformis DSM 13 = ATCC 14580 20
Bacillus halodurans C-125 27
Bacillus weihenstephanensis KBAB4 23
Bacillus thuringiensis str. Al Hakam 16
Bacillus cereus 03BB102 23
Bacillus anthracis str. A0248 14
Bacillus pseudofirmus OF4 33
Bacillus clausii KSM-K16 10
Bacillus cellulosilyticus DSM 2522 24
Bacillus pumilus SAFR-032 13
Bacillus megaterium DSM 319 13
Bacillus coagulans 2-6 24
Macrococcus caseolyticus JCSC5402 18
Staphylococcus pseudintermedius HKU10-03 12
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 24
Staphylococcus lugdunensis HKU09-01 11
Staphylococcus haemolyticus JCSC1435 17
Staphylococcus epidermidis RP62A 16
Staphylococcus carnosus subsp. carnosus TM300 9
Staphylococcus aureus subsp. aureus JH1 17
Staphylococcus aureus 10
Candidatus Cloacamonas acidaminovorans 13
Gemmatimonas aurantiaca T-27 19
Melioribacter roseus P3M 14
Ignavibacterium album JCM 16511 18
Pelodictyon phaeoclathratiforme BU-1 18
Chlorobium luteolum DSM 273 12
Chlorobium chlorochromatii CaD3 6
Chlorobium phaeobacteroides DSM 266 43
Chlorobium phaeovibrioides DSM 265 15
Chlorobium limicola DSM 245 18
Chlorobaculum parvum NCIB 8327 9
Chlorobium tepidum TLS 10
Chloroherpeton thalassium ATCC 35110 11
Prosthecochloris aestuarii DSM 271 20
Haliscomenobacter hydrossis DSM 1100 30
Saprospira grandis str. Lewin 52
Niastella koreensis GR20-10 11
Chitinophaga pinensis DSM 2588 34
Salinibacter ruber M8 31
Rhodothermus marinus DSM 4252 12
Flexibacter litoralis DSM 6794 55
Candidatus Amoebophilus asiaticus 5a2 20
Candidatus Cardinium hertigii 36
Belliella baltica DSM 15883 47
Cyclobacterium marinum DSM 745 30
Marivirga tractuosa DSM 4126 16
Fibrella aestuarina 11
Leadbetterella byssophila DSM 17132 30
Dyadobacter fermentans DSM 18053 23
Cytophaga hutchinsonii ATCC 33406 20
Spirosoma linguale DSM 74 47
Runella slithyformis DSM 19594 26
Parabacteroides distasonis ATCC 8503 16
Tannerella forsythia ATCC 43037 19
Paludibacter propionicigenes WB4 12
Odoribacter splanchnicus DSM 20712 26
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 5
Bacteroides sp. CF50 25
Prevotella melaninogenica ATCC 25845 15
Prevotella intermedia 17 33
Prevotella denticola F0289 12
Prevotella ruminicola 23 12
Porphyromonas asaccharolytica DSM 20707 19
Porphyromonas gingivalis ATCC 33277 9
Alistipes finegoldii DSM 17242 29
Bacteroides salanitronis DSM 18170 18
Bacteroides helcogenes P 36-108 10
Bacteroides vulgatus ATCC 8482 14
Bacteroides thetaiotaomicron VPI-5482 31
Bacteroides fragilis YCH46 12
Pedobacter saltans DSM 12145 19
Solitalea canadensis DSM 3403 16
Pedobacter heparinus DSM 2366 11
Sphingobacterium sp. 21 28
Fluviicola taffensis DSM 16823 11
Candidatus Sulcia muelleri DMIN 2
Candidatus Sulcia muelleri SMDSEM 2
Owenweeksia hongkongensis DSM 17368 23
Zunongwangia profunda SM-A87 40
Krokinobacter sp. 4H-3-7-5 13
Gramella forsetii KT0803 17
Lacinutrix sp. 5H-3-7-4 16
Maribacter sp. HTCC2170 12
Robiginitalea biformata HTCC2501 12
Croceibacter atlanticus HTCC2559 10
Aequorivita sublithincola DSM 14238 13
Zobellia galactanivorans 17
Muricauda ruestringensis DSM 13258 14
Cellulophaga algicola DSM 14237 24
Cellulophaga lytica DSM 7489 13
Flavobacteriaceae bacterium 3519-10 11
Polaribacter sp. MED152 11
Riemerella anatipestifer ATCC 11845 = DSM 15868 10
Ornithobacterium rhinotracheale DSM 15997 26
Capnocytophaga canimorsus Cc5 16
Capnocytophaga ochracea DSM 7271 10
Weeksella virosa DSM 16922 17
Flavobacterium indicum GPTSA100-9 16
Flavobacterium psychrophilum JIP02/86 20
Flavobacterium branchiophilum FL-15 14
Flavobacterium columnare ATCC 49512 21
Flavobacterium johnsoniae UW101 17
Blattabacterium sp. (Nauphoeta cinerea) 4
Blattabacterium sp. (Blattella germanica) str. Bge 4
Fibrobacter succinogenes subsp. succinogenes S85 12
Waddlia chondrophila WSU 86-1044 33
Candidatus Protochlamydia amoebophila UWE25 23
Parachlamydia acanthamoebae UV-7 16
Simkania negevensis Z 9
Chlamydophila pecorum E58 7
Chlamydia muridarum Nigg 7
Chlamydophila pneumoniae TW-183 7
Chlamydophila caviae GPIC 7
Chlamydophila felis Fe/C-56 7
Chlamydophila abortus S26/3 7
Chlamydia psittaci 01DC11 7
Chlamydia trachomatis B/Jali20/OT 7
Phycisphaera mikurensis NBRC 102666 7
Isosphaera pallida ATCC 43644 7
Planctomyces brasiliensis DSM 5305 11
Planctomyces limnophilus DSM 3776 10
Rhodopirellula baltica SH 1 47
Pirellula staleyi DSM 6068 11
Methylacidiphilum infernorum V4 6
Coraliomargarita akajimensis DSM 45221 9
Opitutus terrae PB90-1 17
Akkermansia muciniphila ATCC BAA-835 8
Fretibacterium fastidiosum 2
Thermovirga lienii DSM 17291 24
Aminobacterium colombiense DSM 12261 8
Thermanaerovibrio acidaminovorans DSM 6589 5
Anaerobaculum mobile DSM 13181 7
Turneriella parva DSM 21527 46
Leptospira borgpetersenii serovar Hardjo-bovis str. L550 35
Leptospira interrogans serovar Lai str. IPAV 24
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 13
Brachyspira murdochii DSM 12563 7
Brachyspira intermedia PWS/A 7
Brachyspira pilosicoli 95/1000 6
Brachyspira hyodysenteriae WA1 6
Borrelia garinii PBi 3
Borrelia bissettii DN127 3
Borrelia afzelii PKo 3
Borrelia burgdorferi B31 3
Borrelia recurrentis A1 3
Borrelia duttonii Ly 3
Borrelia crocidurae str. Achema 3
Borrelia turicatae 91E135 4
Borrelia hermsii DAH 3
Spirochaeta smaragdinae DSM 11293 19
Sphaerochaeta pleomorpha str. Grapes 13
Sphaerochaeta globus str. Buddy 13
Sphaerochaeta coccoides DSM 17374 14
Spirochaeta caldaria DSM 7334 12
Treponema azotonutricium ZAS-9 28
Treponema primitia ZAS-2 16
Treponema brennaborense DSM 12168 6
Treponema paraluiscuniculi Cuniculi A 5
Treponema succinifaciens DSM 2489 17
Treponema pallidum subsp. pallidum SS14 10
Geobacillus sp. JF8 25
Treponema denticola ATCC 35405 13
Spirochaeta africana DSM 8902 11
Spirochaeta thermophila DSM 6192 5
Thermodesulfatator indicus DSM 15286 5
Thermodesulfobacterium sp. OPB45 5
Desulfurispirillum indicum S5 21
Calditerrivibrio nitroreducens DSM 19672 17
Denitrovibrio acetiphilus DSM 12809 62
Deferribacter desulfuricans SSM1 10
Flexistipes sinusarabici DSM 4947 45
Marinitoga piezophila KA3 12
Petrotoga mobilis SJ95 10
Mesotoga prima MesG1.Ag.4.2 12
Kosmotoga olearia TBF 19.5.1 31
Fervidobacterium pennivorans DSM 9078 36
Fervidobacterium nodosum Rt17-B1 20
Thermosipho melanesiensis BI429 10
Thermosipho africanus TCF52B 37
Thermotoga lettingae TMO 9
Thermotoga thermarum DSM 5069 10
Thermotoga sp. RQ2 9
Thermotoga naphthophila RKU-10 10
Thermotoga petrophila RKU-1 9
Thermotoga neapolitana DSM 4359 10
Thermotoga maritima MSB8 9
Thermovibrio ammonificans HB-1 4
Desulfurobacterium thermolithotrophum DSM 11699 22
Sulfurihydrogenibium sp. YO3AOP1 12
Sulfurihydrogenibium azorense Az-Fu1 20
Persephonella marina EX-H1 11
Hydrogenobaculum sp. SN 6
Hydrogenobaculum sp. HO 6
Hydrogenobaculum sp. Y04AAS1 7
Thermocrinis albus DSM 14484 6
Aquifex aeolicus VF5 8
Hydrogenobacter thermophilus TK-6 9
Elusimicrobium minutum Pei191 6
uncultured Termite group 1 bacterium phylotype Rs-D17 6
Dictyoglomus turgidum DSM 6724 6
Dictyoglomus thermophilum H-6-12 6
Caldisericum exile AZM16c01 11
Candidatus Chloracidobacterium thermophilum B 8
Candidatus Solibacter usitatus Ellin6076 61
Granulicella tundricola MP5ACTX9 21
Granulicella mallensis MP5ACTX8 17
Candidatus Koribacter versatilis Ellin345 6
Terriglobus saanensis SP1PR4 12
Terriglobus roseus DSM 18391 8
Acidobacterium capsulatum ATCC 51196 24
Thermodesulfovibrio yellowstonii DSM 11347 11
Candidatus Nitrospira defluvii 31
Leptospirillum ferrooxidans C2-3 21
Streptobacillus moniliformis DSM 12112 9
Sebaldella termitidis ATCC 33386 8
Leptotrichia buccalis C-1013-b 8
Ilyobacter polytropus DSM 2926 17
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 15
Candidatus Methylomirabilis oxyfera 18
candidate division WWE3 bacterium RAAC2_WWE3_1 5
candidate division SR1 bacterium RAAC1_SR1_1 8
Candidatus Saccharibacteria bacterium RAAC3_TM7_1 7
Candidatus Saccharimonas aalborgensis 8
Acidithiobacillus ferrivorans SS3 30
Acidithiobacillus caldus SM-1 37
Acidithiobacillus ferrooxidans ATCC 53993 27
Bacteriovorax marinus SJ 13
Bdellovibrio bacteriovorus HD100 10
Nautilia profundicola AmH 9
Nitratifractor salsuginis DSM 16511 14
Sulfurospirillum deleyianum DSM 6946 29
Sulfurospirillum barnesii SES-3 10
Arcobacter sp. L 21
Arcobacter nitrofigilis DSM 7299 11
Arcobacter butzleri RM4018 13
Campylobacter hominis ATCC BAA-381 8
Campylobacter lari RM2100 8
Campylobacter curvus 525.92 7
Campylobacter concisus 13826 4
Campylobacter jejuni subsp. doylei 269.97 6
Campylobacter sp. 03-427 7
Campylobacter fetus subsp. fetus 82-40 7
uncultured Sulfuricurvum sp. RIFRC-1 15
Sulfuricurvum kujiense DSM 16994 14
Sulfurimonas autotrophica DSM 16294 10
Sulfurimonas denitrificans DSM 1251 13
Wolinella succinogenes DSM 1740 23
Helicobacter cetorum MIT 00-7128 7
Helicobacter bizzozeronii CIII-1 6
Helicobacter hepaticus ATCC 51449 8
Helicobacter mustelae 12198 7
Helicobacter felis ATCC 49179 6
Helicobacter cinaedi PAGU611 7
Helicobacter acinonychis str. Sheeba 7
Helicobacter pylori B38 7
Nitratiruptor sp. SB155-2 15
Sulfurovum sp. NBC37-1 13
Desulfarculus baarsii DSM 2075 19
Desulfobacca acetoxidans DSM 11109 16
Syntrophus aciditrophicus SB 13
Desulfomonile tiedjei DSM 6799 43
Syntrophobacter fumaroxidans MPOB 18
Desulfurivibrio alkaliphilus AHT2 22
Desulfotalea psychrophila LSv54 11
Desulfobulbus propionicus DSM 2032 20
Desulfatibacillum alkenivorans AK-01 40
Desulfobacterium autotrophicum HRM2 33
Desulfococcus oleovorans Hxd3 9
Desulfohalobium retbaense DSM 5692 12
Desulfomicrobium baculatum DSM 4028 18
Desulfovibrio piezophilus 19
Desulfovibrio aespoeensis Aspo-2 28
Lawsonia intracellularis PHE/MN1-00 6
Desulfovibrio magneticus RS-1 18
Desulfovibrio alaskensis G20 35
Desulfovibrio vulgaris subsp. vulgaris DP4 12
Desulfovibrio salexigens DSM 2638 9
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 13
Desulfovibrio africanus str. Walvis Bay 10
Hippea maritima DSM 10411 19
Geobacter daltonii FRC-32 9
Geobacter sp. M21 21
Geobacter uraniireducens Rf4 55
Geobacter lovleyi SZ 33
Geobacter bemidjiensis Bem 17
Geobacter sulfurreducens KN400 15
Geobacter metallireducens GS-15 35
Pelobacter propionicus DSM 2379 33
Pelobacter carbinolicus DSM 2380 30
Babela massiliensis 6
Haliangium ochraceum DSM 14365 44
Sorangium cellulosum 'So ce 56' 46
Anaeromyxobacter sp. Fw109-5 19
Anaeromyxobacter dehalogenans 2CP-1 17
Stigmatella aurantiaca DW4/3-1 34
Corallococcus coralloides DSM 2259 28
Myxococcus xanthus DK 1622 37
Myxococcus fulvus HW-1 52
Dechloromonas aromatica RCB 26
Thauera sp. MZ1T 33
Azoarcus sp. KH32C 23
Azoarcus sp. BH72 14
Pandoraea sp. RB-44 21
Aromatoleum aromaticum EbN1 79
Dechlorosoma suillum PS 23
Pseudogulbenkiania sp. NH8B 23
Laribacter hongkongensis HLHK9 22
Chromobacterium violaceum ATCC 12472 18
Neisseria meningitidis alpha14 10
Neisseria meningitidis FAM18 22
Neisseria lactamica 020-06 21
Neisseria gonorrhoeae NCCP11945 15
syncytium symbiont of Diaphorina citri 4
Candidatus Accumulibacter phosphatis clade IIA str. UW-1 83
Candidatus Tremblaya princeps PCIT 1
beta proteobacterium CB 15
Methylibium petroleiphilum PM1 21
Thiomonas arsenitoxydans 22
Thiomonas intermedia K12 28
Rubrivivax gelatinosus IL144 17
Leptothrix cholodnii SP-6 29
Burkholderia rhizoxinica HKI 454 46
Burkholderia phytofirmans PsJN 32
Burkholderia phymatum STM815 36
Burkholderia xenovorans LB400 58
Ralstonia eutropha JMP134 17
Cupriavidus taiwanensis LMG 19424 49
Cupriavidus metallidurans CH34 71
Cupriavidus necator N-1 59
Ralstonia eutropha H16 25
Ralstonia pickettii 12D 27
Ralstonia solanacearum CFBP2957 23
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 16
Burkholderia sp. RPE64 17
Burkholderia sp. CCGE1002 31
Burkholderia thailandensis E264 24
Burkholderia pseudomallei 1106a 28
Burkholderia mallei SAVP1 93
Burkholderia ambifaria AMMD 23
Burkholderia cenocepacia HI2424 28
Burkholderia multivorans ATCC 17616 49
Burkholderia vietnamiensis G4 107
Burkholderia gladioli BSR3 47
Burkholderia glumae BGR1 52
Verminephrobacter eiseniae EF01-2 47
Alicycliphilus denitrificans K601 38
Ramlibacter tataouinensis TTB310 11
Delftia sp. Cs1-4 20
Delftia acidovorans SPH-1 28
Polaromonas sp. JS666 41
Polaromonas naphthalenivorans CJ2 50
Variovorax paradoxus S110 18
Rhodoferax ferrireducens T118 16
Acidovorax ebreus TPSY 21
Acidovorax sp. KKS102 36
Acidovorax sp. JS42 48
Acidovorax citrulli AAC00-1 60
Acidovorax avenae subsp. avenae ATCC 19860 12
Comamonas testosteroni CNB-2 25
Candidatus Zinderia insecticola CARI 2
Herminiimonas arsenicoxydans 25
Collimonas fungivorans Ter331 13
Janthinobacterium sp. Marseille 24
Herbaspirillum seropedicae SmR1 12
Pusillimonas sp. T7-7 16
Advenella kashmirensis WT001 9
Taylorella asinigenitalis MCE3 8
Taylorella equigenitalis MCE9 8
Bordetella petrii DSM 12804 74
Bordetella avium 197N 11
Bordetella pertussis Tohama I 228
Bordetella parapertussis 12822 21
Bordetella bronchiseptica RB50 14
Achromobacter xylosoxidans A8 20
Achromobacter xylosoxidans 13
Thiobacillus denitrificans ATCC 25259 12
Nitrosospira multiformis ATCC 25196 58
Nitrosomonas sp. Is79A3 42
Nitrosomonas eutropha C91 62
Nitrosomonas europaea ATCC 19718 66
Sideroxydans lithotrophicus ES-1 14
Gallionella capsiferriformans ES-2 29
Methylotenera versatilis 301 8
Methylotenera mobilis JLW8 11
Methylovorus sp. MP688 9
Methylovorus glucosetrophus SIP3-4 10
Methylobacillus flagellatus KT 12
Magnetococcus marinus MC-1 81
Parvularcula bermudensis HTCC2503 15
Asticcacaulis excentricus CB 48 17
Brevundimonas subvibrioides ATCC 15264 9
Caulobacter sp. K31 45
Caulobacter crescentus NA1000 17
Caulobacter segnis ATCC 21756 11
Phenylobacterium zucineum HLK1 21
Erythrobacter litoralis HTCC2594 19
Sphingopyxis alaskensis RB2256 19
Novosphingobium sp. PP1Y 31
Novosphingobium aromaticivorans DSM 12444 18
Sphingobium sp. SYK-6 24
Sphingobium japonicum UT26S 37
Sphingobium chlorophenolicum L-1 19
Sphingomonas sp. MM-1 58
Sphingomonas wittichii RW1 29
Zymomonas mobilis subsp. mobilis NCIMB 11163 10
Maricaulis maris MCS10 13
Hirschia baltica ATCC 49814 12
Hyphomonas neptunium ATCC 15444 16
Dinoroseobacter shibae DFL 12 29
Phaeobacter gallaeciensis 2.10 20
Pseudovibrio sp. FO-BEG1 19
Jannaschia sp. CCS1 16
Ruegeria sp. TM1040 18
Ruegeria pomeroyi DSS-3 17
Ketogulonicigenium vulgare Y25 15
Ketogulonigenium vulgarum WSH-001 13
Roseobacter litoralis Och 149 21
Roseobacter denitrificans OCh 114 29
Rhodobacter sphaeroides ATCC 17029 20
Rhodobacter capsulatus SB 1003 16
Paracoccus denitrificans PD1222 21
Rhodospirillum photometricum DSM 122 13
Tistrella mobilis KA081020-065 14
Magnetospirillum magneticum AMB-1 38
Rhodospirillum centenum SW 13
Rhodospirillum rubrum F11 10
Azospirillum lipoferum 4B 16
Azospirillum sp. B510 86
Azospirillum brasilense Sp245 21
Gluconacetobacter xylinus NBRC 3288 37
Granulibacter bethesdensis CGDNIH1 12
Gluconacetobacter diazotrophicus PAl 5 62
Acidiphilium multivorum AIU301 37
Acidiphilium cryptum JF-5 36
Gluconobacter oxydans 621H 49
Acetobacter pasteurianus IFO 3283-01 137
Polymorphum gilvum SL003B-26A1 42
Micavibrio aeruginosavorus ARL-13 10
Candidatus Puniceispirillum marinum IMCC1322 10
alpha proteobacterium HIMB5 8
alpha proteobacterium HIMB59 8
Candidatus Pelagibacter sp. IMCC9063 9
Candidatus Midichloria mitochondrii IricVA 8
Neorickettsia sennetsu str. Miyayama 8
Neorickettsia risticii str. Illinois 8
Wolbachia endosymbiont of Culex quinquefasciatus Pel 62
Wolbachia sp. wRi 20
Ehrlichia chaffeensis str. Arkansas 8
Ehrlichia canis str. Jake 9
Ehrlichia ruminantium str. Gardel 9
Anaplasma phagocytophilum HZ 9
Anaplasma marginale str. Florida 9
Anaplasma centrale str. Israel 9
Orientia tsutsugamushi str. Boryong 7
Rickettsia bellii OSU 85-389 6
Rickettsia canadensis str. McKiel 8
Rickettsia typhi str. Wilmington 7
Rickettsia prowazekii str. BuV67-CWPP 7
Rickettsia philipii str. 364D 7
Rickettsia heilongjiangensis 054 7
Rickettsia peacockii str. Rustic 38
Rickettsia felis URRWXCal2 19
Rickettsia slovaca 13-B 7
Rickettsia parkeri str. Portsmouth 7
Rickettsia massiliae MTU5 12
Rickettsia japonica YH 7
Rickettsia africae ESF-5 7
Rickettsia rhipicephali str. 3-7-female6-CWPP 9
Rickettsia montanensis str. OSU 85-930 7
Candidatus Rickettsia amblyommii str. GAT-30V 11
Rickettsia australis str. Cutlack 8
Rickettsia akari str. Hartford 9
Rickettsia rickettsii str. 'Sheila Smith' 8
Rickettsia conorii str. Malish 7 7
Starkeya novella DSM 506 10
Xanthobacter autotrophicus Py2 39
Azorhizobium caulinodans ORS 571 29
Methylobacterium chloromethanicum CM4 34
Methylobacterium extorquens AM1 19
Methylobacterium sp. 4-46 55
Methylobacterium populi BJ001 36
Methylobacterium nodulans ORS 2060 32
Methylobacterium radiotolerans JCM 2831 27
Parvibaculum lavamentivorans DS-1 11
Candidatus Hodgkinia cicadicola Dsem 1
Ochrobactrum anthropi ATCC 49188 34
Brucella microti CCM 4915 19
Brucella pinnipedialis B2/94 22
Brucella canis ATCC 23365 23
Brucella suis ATCC 23445 21
Brucella melitensis ATCC 23457 19
Brucella ovis ATCC 25840 18
Brucella abortus S19 19
Sinorhizobium fredii NGR234 47
Sinorhizobium medicae WSM419 35
Sinorhizobium meliloti AK83 34
Genome sequence of Rhizobium sp. strain IRBG74 25
Rhizobium etli CIAT 652 12
Rhizobium leguminosarum bv. viciae 3841 29
Agrobacterium tumefaciens str. C58 22
Agrobacterium radiobacter K84 17
Agrobacterium sp. H13-3 19
Agrobacterium vitis S4 29
Candidatus Liberibacter asiaticus str. psy62 10
Mesorhizobium sp. BNC1 19
Mesorhizobium opportunistum WSM2075 10
Mesorhizobium ciceri biovar biserrulae WSM1271 13
Mesorhizobium loti MAFF303099 33
Methylocella silvestris BL2 12
Beijerinckia indica subsp. indica ATCC 9039 11
Pelagibacterium halotolerans B2 16
Rhodomicrobium vannielii ATCC 17100 37
Hyphomicrobium sp. MC1 13
Hyphomicrobium denitrificans ATCC 51888 11
Oligotropha carboxidovorans OM4 20
Rhodopseudomonas palustris BisA53 16
Nitrobacter winogradskyi Nb-255 61
Nitrobacter hamburgensis X14 42
Bradyrhizobium japonicum USDA 110 76
Bradyrhizobium sp. ORS 278 16
Methylocystis sp. SC2 10
Bartonella tribocorum CIP 105476 18
Bartonella clarridgeiae 73 8
Bartonella henselae str. Houston-1 11
Bartonella grahamii as4aup 11
Bartonella quintana str. Toulouse 8
Bartonella bacilliformis KC583 8
Saccharophagus degradans 2-40 17
Teredinibacter turnerae T7901 19
Cellvibrio japonicus Ueda107 41
Aggregatibacter aphrophilus NJ8700 13
Aggregatibacter actinomycetemcomitans D7S-1 34
Haemophilus somnus 129PT 12
Gallibacterium anatis UMN179 32
Pasteurella multocida subsp. multocida str. 3480 13
Haemophilus parasuis SH0165 14
Haemophilus ducreyi 35000HP 12
Haemophilus parainfluenzae T3T1 15
Haemophilus influenzae PittEE 15
Actinobacillus succinogenes 130Z 13
Actinobacillus pleuropneumoniae serovar 5b str. L20 21
Oceanimonas sp. GK1 35
Tolumonas auensis DSM 9187 19
Aeromonas veronii B565 23
Aeromonas salmonicida subsp. salmonicida A449 58
Aeromonas hydrophila subsp. hydrophila ATCC 7966 13
Aliivibrio salmonicida LFI1238 67
Vibrio fischeri MJ11 20
Vibrio sp. Ex25 21
Vibrio harveyi ATCC BAA-1116 300
Vibrio parahaemolyticus RIMD 2210633 24
Vibrio splendidus LGP32 32
Vibrio anguillarum 775 26
Vibrio furnissii NCTC 11218 22
Vibrio vulnificus MO6-24/O 27
Vibrio cholerae O395 26
Photobacterium profundum SS9 150
Psychromonas ingrahamii 37 24
Psychromonas sp. CNPT3 18
Idiomarina loihiensis L2TR 24
Ferrimonas balearica DSM 9799 16
Shewanella piezotolerans WP3 30
Shewanella loihica PV-4 18
Shewanella halifaxensis HAW-EB4 19
Shewanella sediminis HAW-EB3 22
Shewanella denitrificans OS217 40
Shewanella pealeana ATCC 700345 38
Shewanella oneidensis MR-1 98
Shewanella baltica OS185 38
Shewanella woodyi ATCC 51908 21
Shewanella sp. MR-4 25
Shewanella amazonensis SB2B 14
Shewanella violacea DSS12 19
Shewanella frigidimarina NCIMB 400 38
Shewanella putrefaciens CN-32 28
Colwellia psychrerythraea 34H 23
Pseudoalteromonas sp. SM9913 28
Pseudoalteromonas atlantica T6c 28
Pseudoalteromonas haloplanktis TAC125 18
Glaciecola sp. 4H-3-7+YE-5 23
Glaciecola nitratireducens FR1064 15
Marinobacter adhaerens HP15 22
Marinobacter sp. BSs20148 25
Marinobacter hydrocarbonoclasticus ATCC 49840 19
Marinobacter aquaeolei VT8 59
Alteromonas sp. SN2 35
Alteromonas macleodii str. 'Deep ecotype' 30
Kangiella koreensis DSM 16069 12
Hahella chejuensis KCTC 2396 32
Alcanivorax borkumensis SK2 16
Marinomonas posidonica IVIA-Po-181 14
Marinomonas sp. MWYL1 32
Marinomonas mediterranea MMB-1 19
Candidatus Carsonella ruddii PV 1
Chromohalobacter salexigens DSM 3043 14
Halomonas elongata DSM 2581 15
Methylomicrobium alcaliphilum 45
Methylomonas methanica MC09 78
Methylococcus capsulatus str. Bath 23
Dichelobacter nodosus VCS1703A 10
Rhodanobacter denitrificans 23
Frateuria aurantia DSM 6220 18
Pseudoxanthomonas spadix BD-a59 15
Pseudoxanthomonas suwonensis 11-1 15
Stenotrophomonas maltophilia K279a 34
Xylella fastidiosa M23 13
Xanthomonas axonopodis pv. citri str. 306 59
Xanthomonas albilineans GPE PC73 38
Xanthomonas oryzae pv. oryzae PXO99A 212
Xanthomonas campestris pv. campestris str. B100 54
Halothiobacillus neapolitanus c2 15
Spiribacter sp. UAH-SP71 12
Alkalilimnicola ehrlichii MLHE-1 23
Thioalkalivibrio sulfidophilus HL-EbGr7 22
Thioalkalivibrio sp. K90mix 22
Halorhodospira halophila SL1 22
Allochromatium vinosum DSM 180 23
Thiocystis violascens DSM 198 53
Nitrosococcus watsonii C-113 10
Nitrosococcus halophilus Nc4 37
Nitrosococcus oceani ATCC 19707 12
Coxiella burnetii Dugway 5J108-111 16
Legionella longbeachae NSW150 21
Legionella pneumophila str. Corby 18
Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 5
gamma proteobacterium HdN1 16
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 7
Candidatus Vesicomyosocius okutanii HA 7
Photorhabdus asymbiotica 32
Photorhabdus luminescens subsp. laumondii TTO1 80
Xenorhabdus bovienii SS-2004 72
Xenorhabdus nematophila ATCC 19061 101
Providencia stuartii MRSN 2154 27
Proteus mirabilis HI4320 14
Edwardsiella ictaluri 93-146 27
Edwardsiella tarda EIB202 29
Rahnella sp. Y9602 28
Rahnella aquatilis CIP 78.65 = ATCC 33071 23
Yersinia pseudotuberculosis IP 31758 15
Yersinia pestis Pestoides F 58
Yersinia enterocolitica subsp. enterocolitica 8081 49
Serratia sp. AS12 19
Serratia symbiotica str. 'Cinara cedri' 7
Serratia sp. ATCC 39006 24
Serratia plymuthica AS9 19
Serratia proteamaculans 568 24
Dickeya dadantii Ech703 19
Dickeya zeae Ech1591 34
Pectobacterium wasabiae WPP163 15
Pectobacterium sp. SCC3193 25
Pectobacterium atrosepticum SCRI1043 18
Pectobacterium carotovorum subsp. carotovorum PC1 14
Sodalis glossinidius str. 'morsitans' 14
Halyomorpha halys symbiont 8
Pantoea sp. At-9b 23
Pantoea vagans C9-1 15
Pantoea ananatis LMG 20103 17
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 6
Buchnera aphidicola BCc 6
Erwinia tasmaniensis Et1/99 17
Erwinia sp. Ejp617 44
Erwinia billingiae Eb661 24
Erwinia pyrifoliae Ep1/96 41
Erwinia amylovora ATCC 49946 17
Escherichia blattae DSM 4481 46
Candidatus Moranella endobia PCIT 7
Cronobacter turicensis z3032 16
Cronobacter sakazakii ES15 15
Candidatus Riesia pediculicola USDA 4
secondary endosymbiont of Ctenarytaina eucalypti 7
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 24
Candidatus Blochmannia floridanus 8
Enterobacteriaceae bacterium strain FGI 57 18
Shigella sonnei Ss046 236
Shigella flexneri 5 str. 8401 152
Shigella dysenteriae Sd197 163
Shigella boydii CDC 3083-94 124
Salmonella bongori NCTC 12419 15
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 33
Klebsiella oxytoca E718 52
Klebsiella variicola At-22 13
Klebsiella pneumoniae NTUH-K2044 31
Enterobacter aerogenes KCTC 2190 22
Escherichia fergusonii ATCC 35469 25
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 36
Enterobacter sp. R4-368 23
Enterobacter sp. 638 23
Enterobacter asburiae LF7a 17
Enterobacter cloacae subsp. dissolvens SDM 14
Citrobacter rodentium ICC168 42
Citrobacter koseri ATCC BAA-895 14
Azotobacter vinelandii DJ 47
Pseudomonas sp. TKP 37
Pseudomonas sp. UW4 23
Pseudomonas brassicacearum subsp. brassicacearum NFM421 17
Pseudomonas entomophila L48 20
Pseudomonas syringae pv. tomato str. DC3000 51
Pseudomonas stutzeri A1501 35
Pseudomonas fulva 12-X 18
Pseudomonas putida F1 18
Pseudomonas protegens Pf-5 15
Pseudomonas fluorescens SBW25 22
Pseudomonas mendocina ymp 18
Pseudomonas aeruginosa UCBPP-PA14 23
Pseudomonas sp. VLB120 17
Psychrobacter sp. G 16
Psychrobacter sp. PRwf-1 37
Psychrobacter arcticus 273-4 29
Psychrobacter cryohalolentis K5 25
Moraxella catarrhalis RH4 10
Acinetobacter oleivorans DR1 13
Acinetobacter calcoaceticus PHEA-2 12
Acinetobacter baumannii ATCC 17978 17
Acinetobacter sp. ADP1 18
Methylophaga sp. JAM1 28
Cycloclasticus sp. P1 10
Thiomicrospira crunogena XCL-2 19
Thioalkalimicrobium cyclicum ALM1 14
Francisella noatunensis subsp. orientalis str. Toba 04 8
Francisella sp. TX077308 9
Francisella philomiragia subsp. philomiragia ATCC 25017 55
Francisella tularensis subsp. tularensis WY96-3418 58
Francisella cf. novicida 3523 11
Francisella novicida U112 10
Nanoarchaeum equitans Kin4-M 2
Candidatus Caldiarchaeum subterraneum 5
Cenarchaeum symbiosum A 5
Candidatus Nitrosopumilus sp. AR2 3
Nitrosopumilus maritimus SCM1 3
Candidatus Korarchaeum cryptofilum OPF8 6
Acidilobus saccharovorans 345-15 3
Fervidicoccus fontis Kam940 4
Pyrolobus fumarii 1A 3
Hyperthermus butylicus DSM 5456 3
Thermogladius cellulolyticus 1633 4
Ignisphaera aggregans DSM 17230 5
Aeropyrum pernix K1 3
Ignicoccus hospitalis KIN4/I 4
Thermosphaera aggregans DSM 11486 3
Staphylothermus hellenicus DSM 12710 3
Staphylothermus marinus F1 3
Desulfurococcus fermentans DSM 16532 3
Desulfurococcus kamchatkensis 1221n 3
Desulfurococcus mucosus DSM 2162 3
Metallosphaera cuprina Ar-4 4
Metallosphaera sedula DSM 5348 5
Acidianus hospitalis W1 4
Sulfolobus tokodaii str. 7 10
Sulfolobus islandicus Y.N.15.51 7
Sulfolobus solfataricus P2 61
Sulfolobus acidocaldarius DSM 639 4
Thermofilum sp. 1910b 4
Thermofilum pendens Hrk 5 3
Vulcanisaeta moutnovskia 768-28 5
Vulcanisaeta distributa DSM 14429 4
Caldivirga maquilingensis IC-167 4
Pyrobaculum sp. 1860 5
Pyrobaculum calidifontis JCM 11548 4
Pyrobaculum arsenaticum DSM 13514 5
Pyrobaculum oguniense TE7 4
Thermoproteus neutrophilus V24Sta 4
Pyrobaculum aerophilum str. IM2 4
Pyrobaculum islandicum DSM 4184 4
Thermoproteus uzoniensis 768-20 5
Thermoproteus tenax Kra 1 4
halophilic archaeon DL31 19
Methanocella arvoryzae MRE50 20
Methanocella conradii HZ254 8
Methanocella paludicola SANAE 18
Methanosaeta harundinacea 6Ac 6
Methanosaeta thermophila PT 3
Methanosaeta concilii GP6 45
Methanosalsum zhilinae DSM 4017 7
Methanohalobium evestigatum Z-7303 8
Methanococcoides burtonii DSM 6242 4
Methanosarcina acetivorans C2A 55
Methanosarcina mazei Go1 20
Methanosarcina barkeri str. Fusaro 24
Methanohalophilus mahii DSM 5219 5
Methanosphaerula palustris E1-9c 5
Methanoregula boonei 6A8 8
Methanospirillum hungatei JF-1 25
Methanocorpusculum labreanum Z 4
Methanoplanus petrolearius DSM 11571 2
Methanoculleus bourgensis MS2 10
Methanoculleus marisnigri JR1 4
Methanopyrus kandleri AV19 3
Ferroglobus placidus DSM 10642 6
Archaeoglobus profundus DSM 5631 4
Archaeoglobus veneficus SNP6 30
Archaeoglobus fulgidus DSM 4304 13
Thermococcus sp. 4557 3
Thermococcus onnurineus NA1 3
Thermococcus kodakarensis KOD1 2
Thermococcus gammatolerans EJ3 2
Thermococcus sibiricus MM 739 3
Thermococcus barophilus MP 3
Pyrococcus sp. ST04 2
Pyrococcus yayanosii CH1 3
Pyrococcus horikoshii OT3 2
Pyrococcus abyssi GE5 2
Pyrococcus furiosus COM1 34
Thermoplasmatales archaeon BRNA1 7
Thermoplasma volcanium GSS1 8
Thermoplasma acidophilum DSM 1728 3
Picrophilus torridus DSM 9790 2
Salinarchaeum sp. Harcht-Bsk1 6
Halopiger xanaduensis SH-6 10
Methanobacterium sp. AL-21 4
Haloterrigena turkmenica DSM 5511 12
Natrinema sp. J7-2 16
Natrialba magadii ATCC 43099 10
Halorubrum lacusprofundi ATCC 49239 20
Haloquadratum walsbyi DSM 16790 13
Halogeometricum borinquense DSM 11551 18
Haloferax mediterranei ATCC 33500 15
Haloferax volcanii DS2 30
Halomicrobium mukohataei DSM 12286 10
Halorhabdus utahensis DSM 12940 5
Natronomonas pharaonis DSM 2160 7
Haloarcula hispanica ATCC 33960 12
Haloarcula marismortui ATCC 43049 22
Halalkalicoccus jeotgali B3 10
Halobacterium salinarum R1 33
Halobacterium sp. NRC-1 33
Methanotorris igneus Kol 5 12
Methanocaldococcus sp. FS406-22 3
Methanocaldococcus fervens AG86 4
Methanocaldococcus vulcanius M7 2
methanocaldococcus infernus ME 2
Methanocaldococcus jannaschii DSM 2661 6
Methanothermococcus okinawensis IH1 2
Methanococcus aeolicus Nankai-3 3
Methanococcus maripaludis C5 6
Methanococcus voltae A3 2
Methanococcus vannielii SB 5
Methanothermus fervidus DSM 2088 2
Methanothermobacter marburgensis str. Marburg 4
Methanothermobacter thermautotrophicus str. Delta H 3
Methanosphaera stadtmanae DSM 3091 5
Methanobrevibacter sp. AbM4 4
Methanobrevibacter ruminantium M1 9
Methanobrevibacter smithii ATCC 35061 6
Complete genome sequence of Methanobacterium sp. Mb1 6
Aciduliprofundum sp. MAR08-339 3
Aciduliprofundum boonei T469 4
Genome Number
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) 216
Drosophila melanogaster FlyBase 5.12 58
Anopheles gambiae VectorBase AgamP3.6 35
Ascaris suum Victoria/Ghent 48
Caenorhabditis elegans WormBase WS218 106
Cryptococcus neoformans var. grubii H99 20
Cryptococcus neoformans B-3501A 39
Cryptococcus neoformans JEC21 25
Paracoccidioides brasiliensis Pb01 41
Paracoccidioides brasiliensis Pb03 23
Coccidioides posadasii str. Silveira 26
Coccidioides immitis RMSCC 3703 23
Coccidioides immitis RMSCC 2394 26
Coccidioides immitis H538.4 24
Ajellomyces dermatitidis ER-3 27
Histoplasma capsulatum H143 26
Histoplasma capsulatum H88 28
Histoplasma capsulatum G186AR 26
Aspergillus fumigatus A1163 26
Candida albicans WO-1 24
Saccharomyces cerevisiae UC5 17
Saccharomyces cerevisiae PW5 19
Saccharomyces cerevisiae FL100 9
Saccharomyces cerevisiae CLIB324 6
Saccharomyces cerevisiae CBS7960 22
Saccharomyces cerevisiae YJM269 21
Saccharomyces cerevisiae T7 20
Saccharomyces cerevisiae FostersB 20
Saccharomyces cerevisiae FostersO 18
Saccharomyces cerevisiae VL3 27
Saccharomyces cerevisiae Vin13 25
Saccharomyces cerevisiae LalvinQA23 29
Saccharomyces cerevisiae AWRI796 17
Saccharomyces cerevisiae Sigma1278b 38
Saccharomyces cerevisiae W303 24
Saccharomyces cerevisiae JAY291 21
Saccharomyces cerevisiae AWRI1631 10
Saccharomyces cerevisiae YPS163 7
Saccharomyces cerevisiae M22 5
Saccharomyces cerevisiae T73 6
Saccharomyces cerevisiae CLIB215 18
Saccharomyces cerevisiae Y10 5
Saccharomyces cerevisiae YJM789 51
Saccharomyces cerevisiae YJM789 38
Saccharomyces cerevisiae RM11-1a 21
Saccharomyces cerevisiae RM11-1a 20
Saccharomyces cerevisiae SGD 67
Schizosaccharomyces pombe 972h- 32
Batrachochytrium dendrobatidis JEL423 68
Batrachochytrium dendrobatidis JAM81 33
Theobroma cacao Matina 1-6 v0.9 2369
Hordeum vulgare 22 300
Oryza sativa ssp. Indica 908
Trypanosoma brucei Lister 427 v4.1 35
Neospora caninum Nc-Liverpool 6.2 21
Plasmodium falciparum HB3 15
Plasmodium falciparum Dd2 11
Genome Number
Chroococcidiopsis thermalis PCC 7203 31
Chamaesiphon minutus PCC 6605 79
Synechocystis sp. PCC 6803 substr. PCC-P 26
Synechocystis sp. PCC 6803 substr. PCC-N 26
Synechocystis sp. PCC 6803 substr. GT-I 26
Synechocystis sp. PCC 6803 33
Cyanobium gracile PCC 6307 31
Dactylococcopsis salina PCC 8305 8
Synechococcus sp. JA-2-3B'a(2-13) 10
Synechococcus sp. JA-3-3Ab 16
Synechococcus sp. CC9902 9
Synechococcus sp. RCC307 9
Synechococcus sp. CC9605 9
Synechococcus sp. WH 8102 9
Synechococcus sp. WH 7803 9
Synechococcus sp. PCC 7002 15
Synechococcus elongatus PCC 6301 10
Prochlorococcus marinus str. NATL1A 9
Prochlorococcus marinus str. MIT 9301 9
Prochlorococcus marinus str. AS9601 9
Prochlorococcus marinus subsp. marinus str. CCMP1375 10
Prochlorococcus marinus subsp. pastoris str. CCMP1986 9
Prochlorococcus marinus str. MIT 9215 10
Prochlorococcus marinus str. MIT 9211 9
Prochlorococcus marinus str. MIT 9313 9
Prochlorococcus marinus str. MIT 9312 9
Prochlorococcus marinus str. MIT 9303 9
Prochlorococcus marinus str. NATL2A 9
Crinalium epipsammum PCC 9333 28
Oscillatoria nigro-viridis PCC 7112 17
Oscillatoria acuminata PCC 6304 28
Arthrospira platensis NIES-39 12
Cyanothece sp. PCC 7822 41
Cyanothece sp. PCC 7425 14
Cyanothece sp. PCC 7424 36
Cyanothece sp. ATCC 51142 34
Cyanothece sp. PCC 8801 37
Cyanobacterium aponinum PCC 10605 19
Cyanobacterium stanieri PCC 7202 10
Gloeobacter kilaueensis Gloeobacter sp. JS 28
Pleurocapsa minor Pleurocapsa sp. PCC 7327 12
Stanieria cyanosphaera PCC 7437 24
Calothrix parietina Calothrix sp. PCC 6303 52
Cylindrospermum stagnale PCC 7417 35
Anabaena cylindrica PCC 7122 30
Candidatus Phytoplasma solani tobfin_28409 7
Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 31
Candidatus Phytoplasma australiense 13
Mesoplasma florum W37 5
Spiroplasma syrphidicola EA-1 7
Spiroplasma diminutum CUAS-1 5
Spiroplasma chrysopicola DF-1 18
Spiroplasma taiwanense CT-1 5
Spiroplasma apis B31 17
Ureaplasma parvum serovar 3 str. ATCC 700970 7
Mycoplasma parvum str. Indiana 2
Mycoplasma leachii PG50 10
Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 97
Mycoplasma mycoides subsp. mycoides SC str. PG1 65
Candidatus Mycoplasma haemominutum 'Birmingham 1' 2
Mycoplasma ovis str. Michigan 2
Mycoplasma cynos C142 28
Candidatus Mycoplasma haemolamae str. Purdue 4
Mycoplasma suis str. Illinois 2
Mycoplasma haemofelis str. Langford 1 4
Mycoplasma bovis Hubei-1 37
Mycoplasma bovis PG45 44
Mycoplasma putrefaciens Mput9231 6
Mycoplasma fermentans JER 11
Mycoplasma fermentans PG18 15
Mycoplasma agalactiae 21
Mycoplasma pneumoniae M129-B7 2
Mycoplasma pneumoniae FH 3
Mycoplasma pneumoniae M129 3
Mycoplasma hyorhinis SK76 30
Mycoplasma hyorhinis MCLD 24
Mycoplasma hyorhinis HUB-1 30
Mycoplasma hyorhinis DBS 1050 28
Mycoplasma hyopneumoniae 168-L 12
Mycoplasma hyopneumoniae 7422 6
Mycoplasma hyopneumoniae 232 5
Mycoplasma hyopneumoniae 7448 11
Mycoplasma hyopneumoniae J 13
Mycoplasma genitalium M2321 2
Mycoplasma genitalium M2288 3
Mycoplasma genitalium M6282 2
Mycoplasma genitalium M6320 3
Mycoplasma gallisepticum NC08_2008.031-4-3P 4
Mycoplasma gallisepticum CA06_2006.052-5-2P 4
Mycoplasma gallisepticum NC06_2006.080-5-2P 4
Mycoplasma gallisepticum WI01_2001.043-13-2P 4
Mycoplasma gallisepticum NY01_2001.047-5-1P 4
Mycoplasma gallisepticum NC96_1596-4-2P 4
Mycoplasma gallisepticum NC95_13295-2-2P 4
Mycoplasma gallisepticum VA94_7994-1-7P 4
Mycoplasma gallisepticum S6 2
Mycoplasma gallisepticum str. R(high) 5
Mycoplasma gallisepticum str. R(low) 5
Gordonibacter pamelaeae 7-10-1-b 6
Adlercreutzia equolifaciens DSM 19450 7
Frankia sp. EuI1c 16
Frankia sp. CcI3 44
Nocardiopsis alba ATCC BAA-2165 21
Streptomyces albus J1074 15
Streptomyces rapamycinicus NRRL 5491 34
Streptomyces davawensis JCM 4913 49
Streptomyces fulvissimus DSM 40593 24
Streptomyces venezuelae ATCC 10712 13
Streptomyces collinus Tu 365 13
Streptomyces cattleya NRRL 8057 = DSM 46488 31
Streptomyces hygroscopicus subsp. jinggangensis TL01 58
Saccharothrix espanaensis DSM 44229 46
Amycolatopsis mediterranei RB 31
Amycolatopsis mediterranei S699 31
Amycolatopsis mediterranei S699 31
Amycolatopsis orientalis HCCB10007 17
Propionibacterium avidum 44067 15
Propionibacterium acnes ATCC 11828 10
Propionibacterium acnes TypeIA2 P.acn31 10
Propionibacterium acnes TypeIA2 P.acn17 10
Propionibacterium acnes TypeIA2 P.acn33 10
Propionibacterium acnes C1 10
Propionibacterium acnes HL096PA1 9
Propionibacterium acnes 6609 10
Propionibacterium acnes 266 10
Propionibacterium acnes KPA171202 10
Propionibacterium acidipropionici ATCC 4875 31
Actinoplanes friuliensis DSM 7358 20
Rhodococcus pyridinivorans SB3094 34
Rhodococcus erythropolis CCM2595 15
Nocardia brasiliensis ATCC 700358 15
Mycobacterium sp. MOTT36Y 37
Mycobacterium sp. JDM601 19
Mycobacterium abscessus subsp. bolletii 50594 38
Mycobacterium liflandii 128FXT 16
Mycobacterium sp. KMS 56
Mycobacterium sp. MCS 52
Mycobacterium yongonense 05-1390 39
Mycobacterium intracellulare MOTT-64 30
Mycobacterium indicus pranii MTCC 9506 20
Mycobacterium intracellulare MOTT-02 30
Mycobacterium avium subsp. paratuberculosis MAP4 23
Mycobacterium avium subsp. paratuberculosis K-10 23
Mycobacterium canettii CIPT 140070017 45
Mycobacterium canettii CIPT 140060008 35
Mycobacterium canettii CIPT 140070008 38
Mycobacterium canettii CIPT 140070010 16
Mycobacterium tuberculosis EAI5/NITR206 17
Mycobacterium tuberculosis EAI5 15
Mycobacterium tuberculosis CAS/NITR204 22
Mycobacterium tuberculosis str. Beijing/NITR203 34
Mycobacterium tuberculosis UT205 16
Mycobacterium tuberculosis RGTB423 26
Mycobacterium tuberculosis RGTB327 29
Mycobacterium tuberculosis CTRI-2 31
Mycobacterium tuberculosis str. Erdman = ATCC 35801 29
Mycobacterium tuberculosis KZN 605 32
Mycobacterium tuberculosis KZN 4207 29
Mycobacterium tuberculosis CCDC5180 34
Mycobacterium tuberculosis CCDC5079 39
Mycobacterium tuberculosis CCDC5079 39
Mycobacterium tuberculosis H37Ra 35
Mycobacterium tuberculosis str. Haarlem/NITR202 18
Mycobacterium tuberculosis str. Haarlem 26
Mycobacterium tuberculosis F11 35
Mycobacterium tuberculosis H37Rv 33
Mycobacterium tuberculosis CDC1551 19
Mycobacterium bovis AF2122/97 18
Mycobacterium bovis BCG str. Korea 1168P 17
Mycobacterium bovis BCG str. Mexico 18
Mycobacterium bovis BCG str. Tokyo 172 18
Mycobacterium gilvum Spyr1 94
Mycobacterium smegmatis str. MC2 155 44
Mycobacterium leprae TN 7
Mycobacterium kansasii ATCC 12478 39
Corynebacterium maris DSM 45190 14
Mycobacterium smegmatis JS623 17
Corynebacterium halotolerans YIM 70093 = DSM 44683 24
Corynebacterium terpenotabidum Y-11 18
Corynebacterium ulcerans BR-AD22 12
Corynebacterium ulcerans 809 14
Corynebacterium urealyticum DSM 7111 25
Corynebacterium argentoratense DSM 44202 13
Corynebacterium callunae DSM 20147 35
Corynebacterium pseudotuberculosis 258 12
Corynebacterium pseudotuberculosis Cp162 12
Corynebacterium pseudotuberculosis P54B96 12
Corynebacterium pseudotuberculosis 267 12
Corynebacterium pseudotuberculosis 1/06-A 11
Corynebacterium pseudotuberculosis 42/02-A 11
Corynebacterium pseudotuberculosis 3/99-5 11
Corynebacterium pseudotuberculosis 31 12
Corynebacterium pseudotuberculosis CIP 52.97 12
Corynebacterium pseudotuberculosis PAT10 12
Corynebacterium pseudotuberculosis I19 12
Corynebacterium pseudotuberculosis FRC41 12
Corynebacterium pseudotuberculosis C231 12
Corynebacterium pseudotuberculosis 1002 12
Corynebacterium glutamicum MB001 26
Corynebacterium glutamicum SCgG2 33
Corynebacterium glutamicum SCgG1 33
Corynebacterium glutamicum ATCC 13032 28
Corynebacterium glutamicum ATCC 13032 28
Corynebacterium glutamicum ATCC 13032 28
Corynebacterium diphtheriae BH8 58
Corynebacterium diphtheriae INCA 402 37
Corynebacterium diphtheriae VA01 31
Corynebacterium diphtheriae HC04 38
Corynebacterium diphtheriae HC03 38
Corynebacterium diphtheriae HC02 30
Corynebacterium diphtheriae HC01 37
Corynebacterium diphtheriae 241 38
Corynebacterium diphtheriae CDCE 8392 38
Corynebacterium diphtheriae PW8 30
Corynebacterium diphtheriae C7 (beta) 38
Corynebacterium diphtheriae 31A 47
Tropheryma whipplei str. Twist 5
Leifsonia xyli subsp. cynodontis DSM 46306 74
Clavibacter michiganensis subsp. sepedonicus 110
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 10
Gardnerella vaginalis HMP9231 8
Gardnerella vaginalis ATCC 14019 10
Bifidobacterium longum NCC2705 9
Bifidobacterium longum DJO10A 36
Bifidobacterium longum subsp. infantis 157F 43
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 31
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 31
Bifidobacterium longum subsp. longum KACC 91563 35
Bifidobacterium longum subsp. longum BBMN68 30
Bifidobacterium longum subsp. longum F8 14
Bifidobacterium longum subsp. longum JCM 1217 35
Bifidobacterium thermophilum RBL67 13
Bifidobacterium animalis subsp. animalis ATCC 25527 12
Bifidobacterium animalis subsp. lactis Bl12 9
Bifidobacterium animalis subsp. lactis B420 9
Bifidobacterium animalis subsp. lactis ATCC 27673 13
Bifidobacterium animalis subsp. lactis BLC1 9
Bifidobacterium animalis subsp. lactis CNCM I-2494 9
Bifidobacterium animalis subsp. lactis Bi-07 9
Bifidobacterium animalis subsp. lactis V9 9
Bifidobacterium animalis subsp. lactis DSM 10140 9
Bifidobacterium animalis subsp. lactis BB-12 9
Bifidobacterium animalis subsp. lactis AD011 9
Bifidobacterium breve UCC2003 28
Bifidobacterium asteroides PRL2011 8
Bifidobacterium bifidum PRL2010 23
Bifidobacterium bifidum BGN4 15
Actinomyces graevenitzii C83 21
Actinomyces odontolyticus ATCC 17982 16
Actinomyces viscosus C505 15
Dehalococcoides mccartyi GY50 7
Dehalococcoides mccartyi DCMB5 7
Dehalococcoides mccartyi BTF08 12
Dehalococcoides sp. GT 8
Dehalococcoides sp. VS 11
Dehalococcoides sp. CBDB1 8
Chthonomonas calidirosea T49 7
Deinococcus peraridilitoris DSM 19664 43
Thermus oshimai JL-2 13
Thermus thermophilus JL-18 26
Thermus thermophilus SG0.5JP17-16 27
Thermus thermophilus HB8 17
[Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 7
Erysipelothrix rhusiopathiae SY1027 23
Eubacterium siraeum V10Sc8a 8
Clostridium thermocellum DSM 1313 19
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 14
Faecalibacterium prausnitzii L2-6 8
Ruminococcus champanellensis 18P13 9
Sulfobacillus acidophilus TPY 57
Clostridium acidurici 9a 10
Desulfosporosinus meridiei DSM 13257 15
Desulfitobacterium dichloroeliminans LMG P-21439 35
Desulfitobacterium hafniense DCB-2 37
Desulfotomaculum gibsoniae DSM 7213 32
Clostridium difficile BI1 20
Clostridium difficile R20291 18
Clostridium difficile CD196 18
Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 8
Coprococcus catus GD/7 10
Roseburia intestinalis XB6B4 13
Candidatus Arthromitus sp. SFB-rat-Yit 8
Candidatus Arthromitus sp. SFB-mouse-Yit 9
Clostridium sp. SY8519 27
Clostridium saccharobutylicum DSM 13864 42
Clostridium autoethanogenum DSM 10061 14
Clostridium saccharoperbutylacetonicum N1-4(HMT) 19
Clostridium kluyveri NBRC 12016 28
Clostridium tetani genome 12124569 14
Clostridium perfringens SM101 40
Clostridium perfringens str. 13 11
Clostridium pasteurianum BC1 30
Clostridium botulinum H04402 065 20
Clostridium botulinum BKT015925 50
Clostridium botulinum F str. 230613 10
Clostridium botulinum F str. Langeland 13
Clostridium botulinum E3 str. Alaska E43 12
Clostridium botulinum B1 str. Okra 13
Clostridium botulinum Ba4 str. 657 19
Clostridium botulinum A2 str. Kyoto 13
Clostridium botulinum A3 str. Loch Maree 12
Clostridium botulinum A str. Hall 13
Clostridium botulinum A str. ATCC 19397 12
Clostridium acetobutylicum DSM 1731 11
Clostridium acetobutylicum EA 2018 11
Thermoanaerobacterium saccharolyticum JW/SL-YS485 15
Thermoanaerobacterium thermosaccharolyticum M0795 15
Thermacetogenium phaeum DSM 12270 37
Thermoanaerobacter sp. X513 17
Halobacteroides halobius DSM 5150 21
Carnobacterium maltaromaticum LMA28 34
Melissococcus plutonius ATCC 35311 8
Enterococcus mundtii QU 25 15
Enterococcus casseliflavus EC20 12
Enterococcus faecium Aus0085 63
Enterococcus faecium NRRL B-2354 28
Enterococcus faecium DO 73
Enterococcus faecalis str. Symbioflor 1 33
Enterococcus faecalis D32 24
Enterococcus faecalis OG1RF 9
Enterococcus faecalis V583 19
Leuconostoc carnosum JB16 18
Leuconostoc mesenteroides subsp. mesenteroides J18 14
Leuconostoc gelidum JB7 12
Lactobacillus paracasei subsp. paracasei 8700:2 14
Lactobacillus casei LOCK919 25
Lactobacillus casei W56 42
Lactobacillus casei LC2W 43
Lactobacillus casei BD-II 43
Lactobacillus casei BL23 41
Lactobacillus casei str. Zhang 23
Lactobacillus rhamnosus LOCK908 23
Lactobacillus rhamnosus LOCK900 23
Lactobacillus rhamnosus ATCC 8530 17
Lactobacillus rhamnosus GG 26
Lactobacillus rhamnosus GG 26
Lactobacillus johnsonii N6.2 31
Lactobacillus johnsonii DPC 6026 15
Lactobacillus johnsonii NCC 533 16
Lactobacillus salivarius UCC118 14
Lactobacillus fermentum F-6 60
Lactobacillus fermentum CECT 5716 39
Lactobacillus amylovorus GRL 1112 25
Lactobacillus reuteri TD1 27
Lactobacillus reuteri I5007 87
Lactobacillus reuteri JCM 1112 22
Lactobacillus reuteri SD2112 121
Lactobacillus plantarum 16 49
Lactobacillus plantarum ZJ316 26
Lactobacillus plantarum subsp. plantarum ST-III 23
Lactobacillus plantarum subsp. plantarum P-8 47
Lactobacillus plantarum WCFS1 16
Lactobacillus helveticus R0052 23
Lactobacillus helveticus H10 33
Lactobacillus helveticus CNRZ32 8
Lactobacillus delbrueckii subsp. bulgaricus ND02 43
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 15
Lactobacillus delbrueckii subsp. bulgaricus 2038 34
Lactobacillus brevis KB290 48
Lactobacillus acidophilus La-14 16
Lactobacillus acidophilus NCFM 14
Pediococcus pentosaceus SL4 8
Lactococcus garvieae Lg2 20
Lactococcus lactis subsp. lactis KLDS 4.0325 22
Lactococcus lactis subsp. lactis IO-1 12
Lactococcus lactis subsp. lactis CV56 25
Lactococcus lactis subsp. lactis KF147 15
Lactococcus lactis subsp. lactis Il1403 47
Lactococcus lactis subsp. cremoris KW2 8
Lactococcus lactis subsp. cremoris UC509.9 66
Lactococcus lactis subsp. cremoris A76 90
Lactococcus lactis subsp. cremoris NZ9000 60
Lactococcus lactis subsp. cremoris SK11 67
Streptococcus constellatus subsp. pharyngis C1050 8
Streptococcus constellatus subsp. pharyngis C818 8
Streptococcus constellatus subsp. pharyngis C232 8
Streptococcus intermedius B196 9
Streptococcus intermedius C270 8
Streptococcus anginosus C238 32
Streptococcus anginosus C1051 15
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 17
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 13
Streptococcus lutetiensis 033 34
Streptococcus equi subsp. zooepidemicus ATCC 35246 14
Streptococcus equi subsp. zooepidemicus MGCS10565 30
Streptococcus equi subsp. zooepidemicus 28
Streptococcus dysgalactiae subsp. equisimilis 167 49
Streptococcus dysgalactiae subsp. equisimilis AC-2713 53
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 41
Streptococcus dysgalactiae subsp. equisimilis RE378 34
Streptococcus oligofermentans AS 1.3089 14
Streptococcus iniae SF1 57
Streptococcus parasanguinis FW213 14
Streptococcus pyogenes HSC5 24
Streptococcus pyogenes A20 17
Streptococcus pyogenes MGAS1882 13
Streptococcus pyogenes MGAS15252 13
Streptococcus pyogenes Alab49 20
Streptococcus pyogenes MGAS10750 19
Streptococcus pyogenes MGAS10270 15
Streptococcus pyogenes MGAS2096 20
Streptococcus pyogenes MGAS9429 19
Streptococcus pyogenes MGAS6180 14
Clostridium botulinum B str. Eklund 17B 14
Streptococcus pyogenes NZ131 19
Streptococcus pyogenes MGAS8232 25
Streptococcus pyogenes MGAS10394 26
Streptococcus pyogenes MGAS315 16
Streptococcus pyogenes SSI-1 12
Streptococcus pyogenes M1 476 14
Streptococcus pyogenes MGAS5005 17
Streptococcus pyogenes M1 GAS 13
Streptococcus pneumoniae A026 21
Streptococcus pneumoniae ST556 33
Streptococcus pneumoniae SPNA45 16
Streptococcus pneumoniae SPN994039 12
Streptococcus pneumoniae SPN994038 13
Streptococcus pneumoniae SPN034183 13
Streptococcus pneumoniae SPN034156 16
Streptococcus pneumoniae INV104 27
Streptococcus pneumoniae INV200 17
Streptococcus pneumoniae OXC141 13
Streptococcus pneumoniae gamPNI0373 22
Streptococcus pneumoniae AP200 25
Streptococcus pneumoniae ATCC 700669 16
Streptococcus pneumoniae TCH8431/19A 35
Streptococcus pneumoniae CGSP14 28
Streptococcus pneumoniae G54 24
Streptococcus pneumoniae JJA 18
Streptococcus pneumoniae 70585 17
Streptococcus pneumoniae Hungary19A-6 17
Streptococcus pneumoniae Taiwan19F-14 30
Streptococcus pneumoniae D39 13
Streptococcus pneumoniae 670-6B 29
Streptococcus pneumoniae R6 14
Streptococcus pneumoniae TIGR4 27
Streptococcus agalactiae ILRI112 25
Streptococcus agalactiae ILRI005 44
Streptococcus agalactiae 09mas018883 16
Streptococcus agalactiae 2-22 18
Streptococcus agalactiae SA20-06 9
Streptococcus agalactiae GD201008-001 17
Streptococcus agalactiae NEM316 11
Streptococcus agalactiae 2603V/R 15
Streptococcus mutans GS-5 12
Streptococcus mutans LJ23 12
Streptococcus mutans UA159 18
Streptococcus thermophilus MN-ZLW-002 36
Streptococcus thermophilus JIM 8232 31
Streptococcus thermophilus ND03 32
Streptococcus thermophilus CNRZ1066 36
Streptococcus thermophilus LMG 18311 35
Streptococcus suis T15 40
Streptococcus suis TL13 19
Streptococcus suis SC070731 18
Streptococcus suis S735 20
Streptococcus suis ST3 11
Streptococcus suis D9 39
Streptococcus suis SS12 19
Streptococcus suis D12 11
Streptococcus suis ST1 20
Streptococcus suis A7 17
Streptococcus suis JS14 17
Streptococcus suis BM407 20
Streptococcus suis SC84 17
Streptococcus suis GZ1 22
Streptococcus suis 98HAH33 18
Streptococcus suis 05ZYH33 18
Streptococcus salivarius CCHSS3 29
Streptococcus salivarius JIM8777 11
Exiguobacterium antarcticum B7 16
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 49
Thermobacillus composti KWC4 78
Paenibacillus sp. Y412MC10 13
Paenibacillus mucilaginosus KNP414 11
Paenibacillus mucilaginosus K02 19
Paenibacillus larvae subsp. larvae DSM 25430 56
Paenibacillus polymyxa CR1 10
Paenibacillus polymyxa SC2 26
Paenibacillus polymyxa E681 30
Listeria monocytogenes EGD sequence 9
Listeria monocytogenes N53-1 12
Listeria monocytogenes La111 11
Listeria monocytogenes serotype 4b str. LL195 8
Listeria monocytogenes 07PF0776 8
Listeria monocytogenes M7 8
Listeria monocytogenes J1-220 8
Listeria monocytogenes J1816 6
Listeria monocytogenes SLCC2376 8
Listeria monocytogenes SLCC5850 10
Listeria monocytogenes ATCC 19117 8
Listeria monocytogenes L312 8
Listeria monocytogenes SLCC2479 10
Listeria monocytogenes SLCC7179 11
Listeria monocytogenes SLCC2540 8
Listeria monocytogenes SLCC2378 8
Listeria monocytogenes serotype 1/2b str. SLCC2755 14
Listeria monocytogenes serotype 1/2c str. SLCC2372 15
Listeria monocytogenes serotype 7 str. SLCC2482 13
Listeria monocytogenes 08-5578 14
Listeria monocytogenes 08-5923 11
Listeria monocytogenes L99 9
Listeria monocytogenes HCC23 8
Listeria monocytogenes 10403S 9
Listeria monocytogenes J0161 9
Listeria monocytogenes Finland 1998 10
Listeria monocytogenes FSL R2-561 10
Listeria monocytogenes serotype 4b str. F2365 8
Listeria monocytogenes EGD-e 10
Geobacillus sp. C56-T3 16
Geobacillus sp. Y4.1MC1 35
Geobacillus sp. Y412MC52 41
Geobacillus sp. Y412MC61 40
Amphibacillus xylanus NBRC 15112 32
Bacillus amyloliquefaciens subsp. plantarum sequencing 11
Bacillus amyloliquefaciens subsp. plantarum UCMB5033 12
Bacillus amyloliquefaciens subsp. plantarum AS43.3 14
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 11
Bacillus amyloliquefaciens subsp. plantarum UCMB5113 12
Bacillus amyloliquefaciens subsp. plantarum UCMB5036 14
Bacillus amyloliquefaciens subsp. plantarum CAU B946 11
Bacillus amyloliquefaciens LFB112 11
Bacillus amyloliquefaciens CC178 15
Bacillus amyloliquefaciens Y2 11
Bacillus amyloliquefaciens IT-45 13
Bacillus amyloliquefaciens XH7 12
Bacillus amyloliquefaciens LL3 11
Bacillus amyloliquefaciens TA208 12
Bacillus amyloliquefaciens DSM 7 13
Bacillus licheniformis 9945A 12
Bacillus subtilis PY79 10
Bacillus subtilis XF-1 11
Bacillus subtilis QB928 11
Bacillus subtilis BSn5 11
Bacillus subtilis subsp. subtilis str. BAB-1 11
Bacillus subtilis subsp. subtilis str. BSP1 11
Bacillus subtilis subsp. subtilis str. RO-NN-1 15
Bacillus subtilis subsp. subtilis 6051-HGW 11
Bacillus subtilis subsp. spizizenii TU-B-10 14
Bacillus subtilis subsp. spizizenii str. W23 21
Bacillus subtilis subsp. natto BEST195 39
Bacillus licheniformis DSM 13 = ATCC 14580 20
Bacillus infantis NRRL B-14911 14
Bacillus cereus subsp. cytotoxis NVH 391-98 25
Bacillus toyonensis BCT-7112 17
Bacillus thuringiensis HD-771 54
Bacillus thuringiensis HD-789 49
Bacillus thuringiensis MC28 37
Bacillus thuringiensis serovar chinensis CT-43 45
Bacillus thuringiensis YBT-1518 37
Bacillus thuringiensis Bt407 36
Bacillus thuringiensis serovar konkukian str. 97-27 22
Bacillus thuringiensis serovar kurstaki str. HD73 97
Bacillus thuringiensis BMB171 19
Bacillus thuringiensis serovar finitimus YBT-020 30
Bacillus thuringiensis serovar thuringiensis str. IS5056 63
Bacillus cereus FRI-35 21
Bacillus cereus biovar anthracis str. CI 39
Bacillus cereus AH820 23
Bacillus cereus AH187 33
Bacillus cereus B4264 22
Bacillus cereus G9842 23
Bacillus cereus Q1 34
Bacillus cereus F837/76 13
Bacillus cereus NC7401 29
Bacillus cereus E33L 39
Bacillus cereus ATCC 14579 20
Bacillus cereus ATCC 10987 23
Bacillus anthracis str. H9401 23
Bacillus anthracis str. CDC 684 24
Bacillus anthracis str. 'Ames Ancestor' 14
Bacillus anthracis str. Sterne 12
Bacillus anthracis str. Ames 12
Bacillus anthracis str. A2012 2
Bacillus megaterium WSH-002 13
Bacillus megaterium QM B1551 16
Bacillus coagulans 36D1 32
Staphylococcus aureus subsp. aureus MSHR1132 12
Staphylococcus pseudintermedius ED99 10
Staphylococcus pasteuri SP1 9
Staphylococcus lugdunensis N920143 9
Staphylococcus warneri SG1 20
Staphylococcus epidermidis ATCC 12228 15
Staphylococcus aureus CA-347 21
Staphylococcus aureus Bmb9393 16
Staphylococcus aureus M1 17
Staphylococcus aureus 08BA02176 17
Staphylococcus aureus ST228/18412 10
Staphylococcus aureus ST228/18341 11
Staphylococcus aureus ST228/16125 11
Staphylococcus aureus ST228/16035 11
Staphylococcus aureus ST228/15532 10
Staphylococcus aureus ST228/10497 10
Staphylococcus aureus ST228/10388 10
Staphylococcus aureus 04-02981 14
Staphylococcus aureus RF122 11
Staphylococcus aureus subsp. aureus Z172 19
Staphylococcus aureus subsp. aureus 6850 12
Staphylococcus aureus subsp. aureus SA957 18
Staphylococcus aureus subsp. aureus CN1 12
Staphylococcus aureus subsp. aureus SA40 18
Staphylococcus aureus subsp. aureus 11819-97 17
Staphylococcus aureus subsp. aureus M013 20
Staphylococcus aureus subsp. aureus HO 5096 0412 25
Staphylococcus aureus subsp. aureus VC40 11
Staphylococcus aureus subsp. aureus T0131 16
Staphylococcus aureus subsp. aureus LGA251 12
Staphylococcus aureus subsp. aureus ECT-R 2 13
Staphylococcus aureus subsp. aureus JKD6159 13
Staphylococcus aureus subsp. aureus ED133 16
Staphylococcus aureus subsp. aureus ED98 17
Staphylococcus aureus subsp. aureus TW20 22
Staphylococcus aureus subsp. aureus 55/2053 22
Staphylococcus aureus subsp. aureus TCH60 25
Staphylococcus aureus subsp. aureus str. JKD6008 19
Staphylococcus aureus subsp. aureus 71193 19
Staphylococcus aureus subsp. aureus S0385 24
Staphylococcus aureus subsp. aureus str. Newman 12
Staphylococcus aureus subsp. aureus Mu3 13
Staphylococcus aureus subsp. aureus USA300_TCH1516 19
Staphylococcus aureus subsp. aureus USA300_FPR3757 18
Staphylococcus aureus subsp. aureus JH9 18
Staphylococcus aureus subsp. aureus MSSA476 10
Staphylococcus aureus subsp. aureus MRSA252 28
Staphylococcus aureus subsp. aureus MW2 12
Staphylococcus aureus subsp. aureus N315 14
Staphylococcus aureus subsp. aureus Mu50 17
Staphylococcus aureus subsp. aureus COL 12
Staphylococcus aureus subsp. aureus NCTC 8325 13
Chlorobium phaeobacteroides BS1 25
Salinibacter ruber DSM 13855 22
Rhodothermus marinus SG0.5JP17-172 17
Echinicola vietnamensis DSM 17526 22
Emticicia oligotrophica DSM 17448 12
Prevotella sp. oral taxon 299 str. F0039 12
Prevotella dentalis DSM 3688 13
Porphyromonas gingivalis TDC60 9
Porphyromonas gingivalis W83 31
Alistipes shahii WAL 8301 6
Bacteroides xylanisolvens XB1A 9
Bacteroides fragilis 638R 14
Bacteroides fragilis NCTC 9343 12
Candidatus Uzinura diaspidicola str. ASNER 1
Candidatus Sulcia muelleri str. Sulcia-ALF 1
Candidatus Sulcia muelleri CARI 2
Candidatus Sulcia muelleri GWSS 2
Nonlabens dokdonensis DSW-6 12
Psychroflexus torquis ATCC 700755 35
Riemerella anatipestifer RA-CH-2 11
Riemerella anatipestifer RA-CH-1 12
Riemerella anatipestifer RA-GD 10
Riemerella anatipestifer ATCC 11845 = DSM 15868 10
Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA 4
Blattabacterium sp. (Blaberus giganteus) 4
Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona 4
Blattabacterium sp. (Periplaneta americana) str. BPLAN 4
Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 4
Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 4
Fibrobacter succinogenes subsp. succinogenes S85 12
Chlamydia pecorum P787 7
Chlamydia pecorum W73 7
Chlamydia pecorum PV3056/3 7
Chlamydophila pneumoniae LPCoLN 7
Chlamydophila pneumoniae J138 7
Chlamydophila pneumoniae CWL029 7
Chlamydophila pneumoniae AR39 7
Chlamydia psittaci 01DC12 7
Chlamydia psittaci WC 7
Chlamydia psittaci M56 7
Chlamydia psittaci WS/RT/E30 8
Chlamydia psittaci VS225 7
Chlamydia psittaci MN 7
Chlamydia psittaci GR9 7
Chlamydia psittaci 84/55 7
Chlamydia psittaci 08DC60 7
Chlamydia psittaci 02DC15 7
Chlamydia psittaci C19/98 7
Chlamydia psittaci NJ1 7
Chlamydia psittaci CP3 7
Chlamydophila psittaci RD1 7
Chlamydia psittaci Mat116 7
Chlamydophila psittaci 6BC 7
Chlamydophila psittaci 6BC 7
Chlamydia trachomatis C/TW-3 7
Chlamydia trachomatis L2/434/Bu(f) 7
Chlamydia trachomatis L2/434/Bu(i) 7
Chlamydia trachomatis IU888 7
Chlamydia trachomatis IU824 7
Chlamydia trachomatis L2b/Canada2 7
Chlamydia trachomatis L2b/Canada1 7
Chlamydia trachomatis L3/404/LN 7
Chlamydia trachomatis L2b/Ams5 7
Chlamydia trachomatis L2b/Ams4 7
Chlamydia trachomatis L2b/Ams3 7
Chlamydia trachomatis L2b/Ams2 7
Chlamydia trachomatis L2b/Ams1 7
Chlamydia trachomatis L2b/795 7
Chlamydia trachomatis L2b/CV204 7
Chlamydia trachomatis L2b/LST 7
Chlamydia trachomatis L2b/UCH-2 7
Chlamydia trachomatis L2b/8200/07 7
Chlamydia trachomatis L2/25667R 7
Chlamydia trachomatis L1/224 7
Chlamydia trachomatis L1/115 7
Chlamydia trachomatis L1/440/LN 7
Chlamydia trachomatis K/SotonK1 7
Chlamydia trachomatis Ia/SotonIa3 7
Chlamydia trachomatis Ia/SotonIa1 7
Chlamydia trachomatis G/SotonG1 7
Chlamydia trachomatis F/SotonF3 7
Chlamydia trachomatis F/SW5 7
Chlamydia trachomatis F/SW4 7
Chlamydia trachomatis E/SotonE8 7
Chlamydia trachomatis E/SotonE4 7
Chlamydia trachomatis E/SW3 7
Chlamydia trachomatis D/SotonD6 7
Chlamydia trachomatis D/SotonD5 7
Chlamydia trachomatis D/SotonD1 7
Chlamydia trachomatis A/5291 7
Chlamydia trachomatis A/363 7
Chlamydia trachomatis RC-J/971 7
Chlamydia trachomatis RC-L2/55 7
Chlamydia trachomatis J/6276tet1 7
Chlamydia trachomatis RC-J/966 7
Chlamydia trachomatis RC-J(s)/122 7
Chlamydia trachomatis RC-F(s)/342 7
Chlamydia trachomatis RC-L2(s)/3 7
Chlamydia trachomatis RC-J/953 7
Chlamydia trachomatis RC-J943 7
Chlamydia trachomatis RC-Fs852 7
Chlamydia trachomatis RC-L2s46 7
Chlamydia trachomatis RC-F69 7
Chlamydia trachomatis L2c 7
Chlamydia trachomatis D-LC 7
Chlamydia trachomatis D-EC 7
Chlamydia trachomatis G/9301 7
Chlamydia trachomatis G/11074 7
Chlamydia trachomatis G/11222 7
Chlamydia trachomatis G/9768 7
Chlamydia trachomatis E/150 7
Chlamydia trachomatis E/11023 7
Chlamydia trachomatis B/TZ1A828/OT 7
Chlamydia trachomatis Sweden2 7
Chlamydia trachomatis E/Bour 7
Chlamydia trachomatis A2497 7
Chlamydia trachomatis A2497 7
Chlamydia trachomatis L2b/UCH-1/proctitis 7
Chlamydia trachomatis 434/Bu 7
Chlamydia trachomatis A/HAR-13 7
Chlamydia trachomatis D/UW-3/CX 7
Singulisphaera acidiphila DSM 18658 101
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 34
Leptospira interrogans serovar Lai str. 56601 23
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 15
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 16
Brachyspira pilosicoli WesB 12
Brachyspira pilosicoli B2904 45
Helicobacter cinaedi ATCC BAA-847 7
Brachyspira pilosicoli P43/6/78 4
Borrelia garinii NMJW1 3
Borrelia garinii BgVir 3
Borrelia afzelii HLJ01 3
Borrelia afzelii PKo 3
Borrelia burgdorferi CA382 3
Borrelia burgdorferi JD1 3
Borrelia burgdorferi N40 3
Borrelia burgdorferi ZS7 3
Borrelia miyamotoi LB-2001 4
Treponema pedis str. T A4 7
Treponema pallidum str. Fribourg-Blanc 5
Treponema pallidum subsp. pertenue str. Gauthier 5
Treponema pallidum subsp. pertenue str. CDC2 5
Treponema pallidum subsp. pertenue str. SamoaD 5
Treponema pallidum subsp. pallidum str. Mexico A 5
Treponema pallidum subsp. pallidum str. Chicago 4
Treponema pallidum subsp. pallidum DAL-1 5
Treponema pallidum subsp. pallidum str. Nichols 5
Spirochaeta thermophila DSM 6578 20
Thermotoga maritima MSB8 9
Hydrogenobacter thermophilus TK-6 9
Leptospirillum ferriphilum ML-04 15
Fusobacterium nucleatum subsp. vincentii 3_1_36A2 9
Fusobacterium nucleatum subsp. animalis 4_8 8
Acidithiobacillus ferrooxidans ATCC 23270 23
Bdellovibrio exovorus JSS 8
Bdellovibrio bacteriovorus str. Tiberius 16
Arcobacter butzleri 7h1h 14
Arcobacter butzleri ED-1 14
Campylobacter jejuni Waterborne C.jejuni Outbreak 7
Campylobacter jejuni RM1221 8
Campylobacter jejuni subsp. jejuni 00-2544 8
Campylobacter jejuni subsp. jejuni 00-2538 8
Campylobacter jejuni subsp. jejuni 00-2426 7
Campylobacter jejuni subsp. jejuni 00-2425 8
Campylobacter jejuni subsp. jejuni PT14 7
Campylobacter jejuni subsp. jejuni ICDCCJ07001 7
Campylobacter jejuni subsp. jejuni S3 9
Campylobacter jejuni subsp. jejuni M1 7
Campylobacter jejuni subsp. jejuni IA3902 7
Campylobacter jejuni subsp. jejuni 81116 7
Campylobacter jejuni subsp. jejuni 81-176 7
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 7
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 7
Campylobacter coli 76339 7
Campylobacter coli 15-537360 7
Campylobacter coli CVM N29710 7
Helicobacter cetorum MIT 99-5656 7
Helicobacter pylori BM012S 7
Helicobacter pylori BM012A 7
Helicobacter pylori SouthAfrica20 8
Helicobacter pylori UM298 6
Helicobacter pylori UM066 7
Helicobacter pylori UM037 6
Helicobacter pylori UM299 6
Helicobacter pylori UM032 6
Helicobacter pylori OK310 7
Helicobacter pylori OK113 8
Helicobacter pylori Rif2 7
Helicobacter pylori Rif1 7
Helicobacter pylori HUP-B14 7
Helicobacter pylori PeCan18 7
Helicobacter pylori Shi169 8
Helicobacter pylori Shi112 7
Helicobacter pylori Shi417 7
Helicobacter pylori XZ274 7
Helicobacter pylori Aklavik86 7
Helicobacter pylori Aklavik117 7
Helicobacter pylori SNT49 7
Helicobacter pylori Puno135 8
Helicobacter pylori Puno120 7
Helicobacter pylori ELS37 7
Helicobacter pylori Gambia94/24 7
Helicobacter pylori SouthAfrica7 7
Helicobacter pylori India7 8
Helicobacter pylori Lithuania75 8
Helicobacter pylori 2017 7
Helicobacter pylori 2018 7
Helicobacter pylori 908 7
Helicobacter pylori F57 8
Helicobacter pylori F30 7
Helicobacter pylori F16 8
Helicobacter pylori Sat464 7
Helicobacter pylori Cuz20 8
Helicobacter pylori PeCan4 8
Helicobacter pylori SJM180 7
Helicobacter pylori B8 7
Helicobacter pylori 52 8
Helicobacter pylori v225d 8
Helicobacter pylori 83 8
Helicobacter pylori 35A 7
Helicobacter pylori P12 7
Helicobacter pylori G27 7
Helicobacter pylori Shi470 8
Helicobacter pylori HPAG1 8
Helicobacter pylori 51 8
Helicobacter pylori F32 7
Helicobacter pylori J99 7
Helicobacter pylori 26695 6
Helicobacter pylori 26695 6
Desulfocapsa sulfexigens DSM 10523 21
Desulfobacula toluolica Tol2 44
Lawsonia intracellularis N343 6
Desulfovibrio hydrothermalis AM13 = DSM 14728 42
Desulfovibrio vulgaris RCH1 19
Desulfovibrio vulgaris str. 'Miyazaki F' 12
Desulfovibrio vulgaris str. Hildenborough 19
Desulfovibrio gigas DSM 1382 = ATCC 19364 14
Desulfovibrio desulfuricans ND132 7
Geobacter sp. M18 15
Geobacter sulfurreducens PCA 26
Sorangium cellulosum So0157-2 33
Anaeromyxobacter sp. K 18
Anaeromyxobacter dehalogenans 2CP-C 13
Myxococcus stipitatus DSM 14675 26
Neisseria meningitidis WUE 2594 23
Neisseria meningitidis G2136 40
Neisseria meningitidis M04-240196 28
Neisseria meningitidis M01-240149 24
Neisseria meningitidis NZ-05/33 25
Neisseria meningitidis M01-240355 25
Neisseria meningitidis 8013 21
Neisseria meningitidis 053442 21
Neisseria meningitidis Z2491 19
Neisseria meningitidis H44/76 28
Neisseria meningitidis alpha710 22
Neisseria meningitidis MC58 26
Neisseria gonorrhoeae TCDC-NG08107 13
Neisseria gonorrhoeae FA 1090 12
Candidatus Nasuia deltocephalinicola str. NAS-ALF 1
Candidatus Tremblaya phenacola PAVE 1
Candidatus Tremblaya princeps PCVAL 1
Candidatus Kinetoplastibacterium oncopeltii TCC290E 7
Candidatus Kinetoplastibacterium galatii TCC219 8
Candidatus Kinetoplastibacterium desouzaii TCC079E 8
Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis) 8
Kinetoplastibacterium blastocrithidii Candidatus TCC012E 8
Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 8
Candidatus Kinetoplastibacterium crithidii TCC036E 8
Burkholderia phenoliruptrix BR3459a 32
Pandoraea pnomenusa 3kgm 29
Ralstonia pickettii 12J 27
Ralstonia solanacearum FQY_4 47
Ralstonia solanacearum Po82 43
Ralstonia solanacearum PSI07 33
Ralstonia solanacearum CMR15 23
Ralstonia solanacearum GMI1000 66
Polynucleobacter necessarius subsp. necessarius STIR1 7
Burkholderia sp. YI23 48
Burkholderia sp. CCGE1003 14
Burkholderia sp. CCGE1001 16
Burkholderia sp. KJ006 26
Burkholderia thailandensis MSMB121 20
Burkholderia pseudomallei MSHR305 40
Burkholderia pseudomallei NCTC 13179 29
Burkholderia pseudomallei BPC006 21
Burkholderia pseudomallei 1026b 31
Burkholderia pseudomallei MSHR346 15
Burkholderia pseudomallei 668 25
Burkholderia pseudomallei 1710b 31
Burkholderia pseudomallei K96243 19
Burkholderia mallei NCTC 10229 101
Burkholderia mallei NCTC 10247 100
Burkholderia mallei ATCC 23344 100
Burkholderia lata 18
Burkholderia ambifaria MC40-6 28
Burkholderia cenocepacia MC0-3 43
Burkholderia cenocepacia AU 1054 23
Burkholderia cenocepacia J2315 41
Burkholderia multivorans ATCC 17616 49
Burkholderia cepacia GG4 16
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 25
Alicycliphilus denitrificans BC 30
Variovorax paradoxus B4 32
Variovorax paradoxus EPS 22
Taylorella asinigenitalis 14/45 8
Taylorella equigenitalis 14/56 8
Taylorella equigenitalis ATCC 35865 8
Bordetella pertussis CS 210
Bordetella parapertussis 18323 244
Bordetella parapertussis Bpp5 12
Bordetella bronchiseptica MO149 12
Bordetella bronchiseptica 253 15
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 11
Nitrosomonas sp. AL212 51
Sulfuricella denitrificans skB26 17
Caulobacter crescentus CB15 17
Zymomonas mobilis subsp. mobilis ATCC 29191 31
Zymomonas mobilis subsp. mobilis CP4 8
Zymomonas mobilis subsp. mobilis ATCC 10988 8
Zymomonas mobilis subsp. mobilis ZM4 8
Zymomonas mobilis subsp. pomaceae ATCC 29192 8
Phaeobacter gallaeciensis DSM 17395 14
Phaeobacter gallaeciensis DSM 26640 17
Leisingera methylohalidivorans DSM 14336 33
Octadecabacter antarcticus 307 103
Octadecabacter arcticus 238 224
Rhodobacter sphaeroides KD131 25
Rhodobacter sphaeroides ATCC 17025 89
Rhodobacter sphaeroides 2.4.1 16
Paracoccus aminophilus JCM 7686 32
Candidatus Endolissoclinum faulkneri L2 6
Magnetospirillum gryphiswaldense MSR-1 v2 21
Rhodospirillum rubrum ATCC 11170 10
Gluconacetobacter diazotrophicus PAl 5 62
Gluconobacter oxydans H24 44
Acetobacter pasteurianus 386B 17
Acetobacter pasteurianus IFO 3283-12 134
Acetobacter pasteurianus IFO 3283-01-42C 127
Acetobacter pasteurianus IFO 3283-32 134
Acetobacter pasteurianus IFO 3283-26 136
Acetobacter pasteurianus IFO 3283-22 136
Acetobacter pasteurianus IFO 3283-07 135
Acetobacter pasteurianus IFO 3283-03 136
Micavibrio aeruginosavorus EPB 10
Candidatus Pelagibacter ubique HTCC1062 8
Wolbachia endosymbiont of Drosophila melanogaster 15
Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon 8
Wolbachia endosymbiont strain TRS of Brugia malayi 9
Wolbachia endosymbiont of Drosophila simulans wHa 19
Wolbachia endosymbiont of Drosophila simulans wNo 12
Ehrlichia muris AS145 8
Ehrlichia ruminantium str. Welgevonden 9
Ehrlichia ruminantium str. Welgevonden 9
Anaplasma phagocytophilum str. Dog2 9
Anaplasma phagocytophilum str. HZ2 9
Anaplasma phagocytophilum str. JM 9
Anaplasma marginale str. Dawn 7
Anaplasma marginale str. Gypsy Plains 8
Anaplasma marginale str. St. Maries 9
Orientia tsutsugamushi str. Ikeda 7
Rickettsia bellii RML369-C 7
Rickettsia canadensis str. CA410 8
Rickettsia typhi str. B9991CWPP 7
Rickettsia typhi str. TH1527 7
Rickettsia prowazekii str. Breinl 7
Rickettsia prowazekii str. NMRC Madrid E 7
Rickettsia prowazekii str. RpGvF24 7
Rickettsia prowazekii str. GvV257 7
Rickettsia prowazekii str. Dachau 7
Rickettsia prowazekii str. Katsinyian 7
Rickettsia prowazekii str. Chernikova 7
Rickettsia prowazekii Rp22 7
Rickettsia prowazekii str. Madrid E 7
Rickettsia slovaca str. D-CWPP 7
Rickettsia massiliae str. AZT80 8
Rickettsia rickettsii str. Arizona 8
Rickettsia rickettsii str. Brazil 8
Rickettsia rickettsii str. Hauke 8
Rickettsia rickettsii str. Colombia 8
Rickettsia rickettsii str. Hlp#2 8
Rickettsia rickettsii str. Hino 8
Rickettsia rickettsii str. Iowa 8
Methylobacterium extorquens DM4 39
Methylobacterium extorquens PA1 21
Brucella ceti TE10759-12 20
Brucella ceti TE28753-12 18
Brucella canis HSK A52141 22
Brucella suis VBI22 20
Brucella suis 1330 18
Brucella suis 1330 18
Brucella melitensis NI 19
Brucella melitensis M5-90 22
Brucella melitensis M28 23
Brucella melitensis bv. 1 str. 16M 21
Brucella abortus A13334 20
Brucella melitensis biovar Abortus 2308 19
Brucella abortus bv. 1 str. 9-941 16
Sinorhizobium fredii USDA 257 44
Sinorhizobium fredii HH103 79
Sinorhizobium meliloti 2011 35
Sinorhizobium meliloti GR4 36
Sinorhizobium meliloti Rm41 31
Sinorhizobium meliloti SM11 59
Sinorhizobium meliloti BL225C 32
Sinorhizobium meliloti 1021 49
Rhizobium etli CFN 42 29
Rhizobium etli bv. mimosae str. Mim1 14
Rhizobium tropici CIAT 899 33
Rhizobium leguminosarum bv. trifolii WSM2304 27
Rhizobium leguminosarum bv. trifolii WSM1325 30
Liberibacter crescens BT-1 8
Candidatus Liberibacter solanacearum CLso-ZC1 11
Candidatus Liberibacter americanus str. Sao Paulo 10
Candidatus Liberibacter asiaticus str. gxpsy 11
Mesorhizobium australicum WSM2073 12
Hyphomicrobium nitrativorans NL23 8
Hyphomicrobium denitrificans 1NES1 12
Oligotropha carboxidovorans OM5 19
Oligotropha carboxidovorans OM5 19
Rhodopseudomonas palustris DX-1 19
Rhodopseudomonas palustris TIE-1 19
Rhodopseudomonas palustris HaA2 10
Rhodopseudomonas palustris BisB5 14
Rhodopseudomonas palustris BisB18 17
Rhodopseudomonas palustris CGA009 16
Bradyrhizobium sp. S23321 9
Bradyrhizobium sp. BTAi1 34
Bradyrhizobium oligotrophicum S58 19
Bradyrhizobium japonicum USDA 6 56
Bartonella australis Aust/NH1 10
Bartonella vinsonii subsp. berkhoffii str. Winnie 10
Bartonella quintana RM-11 7
Simiduia agarivorans SA1 = DSM 21679 15
Mannheimia succiniciproducens MBEL55E 18
Bibersteinia trehalosi USDA-ARS-USMARC-192 16
Aggregatibacter actinomycetemcomitans ANH9381 22
Aggregatibacter actinomycetemcomitans D11S-1 20
Haemophilus somnus 2336 16
Mannheimia haemolytica USMARC_2286 34
Mannheimia haemolytica M42548 40
Mannheimia haemolytica D174 28
Mannheimia haemolytica D171 35
Mannheimia haemolytica D153 32
Mannheimia haemolytica USDA-ARS-USMARC-183 36
Mannheimia haemolytica USDA-ARS-USMARC-185 33
Pasteurella multocida 36950 14
Pasteurella multocida subsp. multocida str. HN06 12
Pasteurella multocida subsp. multocida str. Pm70 11
Haemophilus parasuis ZJ0906 18
Haemophilus influenzae KR494 11
Haemophilus influenzae F3047 15
Haemophilus influenzae F3031 14
Haemophilus influenzae 10810 15
Haemophilus influenzae PittGG 12
Haemophilus influenzae 86-028NP 12
Haemophilus influenzae R2866 12
Haemophilus influenzae R2846 11
Haemophilus influenzae Rd KW20 14
Actinobacillus suis H91-0380 14
Actinobacillus pleuropneumoniae serovar 3 str. JL03 24
Actinobacillus pleuropneumoniae serovar 7 str. AP76 33
Aeromonas hydrophila ML09-119 18
Vibrio fischeri ES114 19
Vibrio sp. EJY3 25
Vibrio parahaemolyticus BB22OP 27
Vibrio alginolyticus NBRC 15630 = ATCC 17749 30
Vibrio anguillarum Listonella anguillarum M3 27
Vibrio nigripulchritudo VibrioScope 28
Vibrio vulnificus CMCP6 38
Vibrio vulnificus YJ016 45
Vibrio cholerae LMA3984-4 17
Vibrio cholerae M66-2 22
Vibrio cholerae O395 26
Vibrio cholerae IEC224 26
Vibrio cholerae O1 str. 2010EL-1786 24
Vibrio cholerae MJ-1236 23
Vibrio cholerae O1 biovar El Tor str. N16961 24
Idiomarina loihiensis GSL 199 24
Shewanella sp. W3-18-1 50
Shewanella sp. ANA-3 38
Shewanella baltica BA175 32
Shewanella baltica OS678 46
Shewanella baltica OS117 124
Shewanella baltica OS223 43
Shewanella baltica OS195 49
Shewanella baltica OS155 136
Shewanella sp. MR-7 27
Shewanella putrefaciens 200 65
Glaciecola psychrophila 170 54
Alteromonas macleodii str. 'Ionian Sea UM4b' 24
Alteromonas macleodii str. 'Ionian Sea UM7' 34
Alteromonas macleodii str. 'Ionian Sea U8' 21
Alteromonas macleodii str. 'Ionian Sea U7' 24
Alteromonas macleodii str. 'Ionian Sea U4' 26
Alteromonas macleodii str. 'Aegean Sea MED64' 26
Alteromonas macleodii str. 'English Channel 615' 21
Alteromonas macleodii AltDE1 38
Alteromonas macleodii str. 'English Channel 673' 24
Alteromonas macleodii str. 'Balearic Sea AD45' 16
Alteromonas macleodii str. 'Black Sea 11' 26
Alteromonas macleodii ATCC 27126 20
Alcanivorax dieselolei B5 24
Thalassolituus oleivorans MIL-1 30
Candidatus Portiera aleyrodidarum TV 2
Candidatus Carsonella ruddii PC isolate NHV 1
Candidatus Carsonella ruddii HT isolate Thao2000 1
Candidatus Carsonella ruddii CS isolate Thao2000 1
Candidatus Carsonella ruddii CE isolate Thao2000 1
Candidatus Carsonella ruddii DC 1
Candidatus Carsonella ruddii HC isolate Thao2000 1
Stenotrophomonas maltophilia D457 20
Stenotrophomonas maltophilia JV3 16
Stenotrophomonas maltophilia R551-3 23
Xylella fastidiosa subsp. fastidiosa GB514 14
Xylella fastidiosa M12 12
Xylella fastidiosa Temecula1 14
Xylella fastidiosa 9a5c 14
Xanthomonas citri subsp. citri Aw12879 66
Xanthomonas campestris pv. vesicatoria str. 85-10 74
Xanthomonas axonopodis pv. citrumelo F1 29
Xanthomonas axonopodis Xac29-1 49
Xanthomonas oryzae pv. oryzicola BLS256 106
Xanthomonas oryzae pv. oryzae MAFF 311018 185
Xanthomonas oryzae pv. oryzae KACC 10331 171
Xanthomonas campestris pv. raphani 756C 31
Xanthomonas campestris pv. campestris str. 8004 45
Xanthomonas campestris pv. campestris str. ATCC 33913 56
Spiribacter salinus M19-40 12
Thioalkalivibrio nitratireducens DSM 14787 31
Thioflavicoccus mobilis 8321 42
Coxiella burnetii CbuK_Q154 14
Coxiella burnetii CbuG_Q212 10
Coxiella burnetii RSA 331 8
Coxiella burnetii RSA 493 14
Legionella pneumophila str. Paris 24
Legionella pneumophila str. Lens 32
Legionella pneumophila subsp. pneumophila LPE509 25
Legionella pneumophila subsp. pneumophila str. Thunder Bay 28
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 28
Legionella pneumophila subsp. pneumophila 33
Legionella pneumophila subsp. pneumophila 31
Legionella pneumophila subsp. pneumophila ATCC 43290 24
Legionella pneumophila 2300/99 Alcoy 21
Proteus mirabilis BB2000 12
Morganella morganii subsp. morganii KT 16
Edwardsiella tarda C07-087 16
Edwardsiella tarda FL6-60 19
Rahnella aquatilis HX2 34
Yersinia pseudotuberculosis PB1/+ 36
Yersinia pseudotuberculosis YPIII 18
Yersinia pseudotuberculosis IP 32953 36
Yersinia pestis biovar Microtus str. 91001 66
Yersinia pestis A1122 71
Yersinia pestis Z176003 60
Yersinia pestis D182038 65
Yersinia pestis D106004 60
Yersinia pestis biovar Medievalis str. Harbin 35 62
Yersinia pestis Nepal516 57
Yersinia pestis Antiqua 108
Yersinia pestis Angola 75
Yersinia pestis CO92 76
Yersinia pestis KIM10+ 63
Yersinia enterocolitica subsp. palearctica 105.5R(r) 25
Yersinia enterocolitica subsp. palearctica Y11 31
Serratia sp. AS13 18
Serratia plymuthica S13 22
Serratia plymuthica 4Rx13 17
Serratia marcescens FGI94 29
Serratia marcescens WW4 15
Serratia liquefaciens ATCC 27592 18
Dickeya dadantii Ech586 16
Dickeya dadantii 3937 25
Pectobacterium carotovorum subsp. carotovorum PCC21 13
Pantoea ananatis LMG 5342 20
Pantoea ananatis PA13 15
Pantoea ananatis AJ13355 17
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 6
Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 6
Buchnera aphidicola (Cinara tujafilina) 5
Buchnera aphidicola str. Bp (Baizongia pistaciae) 6
Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 5
Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) 7
Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) 6
Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 7
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) 6
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 4
Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 4
Buchnera aphidicola str. APS (Acyrthosiphon pisum) 5
Buchnera aphidicola str. Sg (Schizaphis graminum) 6
Erwinia pyrifoliae DSM 12163 41
Erwinia amylovora CFBP1430 17
Candidatus Moranella endobia PCVAL 7
Cronobacter sakazakii CMCC 45402 16
Cronobacter sakazakii SP291 18
Cronobacter sakazakii ATCC BAA-894 15
secondary endosymbiont of Heteropsylla cubana Thao2000 7
Candidatus Blochmannia chromaiodes str. 640 8
Candidatus Blochmannia vafer str. BVAF 8
Candidatus Blochmannia pennsylvanicus str. BPEN 8
Raoultella ornithinolytica B6 16
Shigella sonnei 53G 220
Shigella flexneri 2002017 182
Shigella flexneri 2a str. 2457T 149
Shigella flexneri 2a str. 301 186
Shigella dysenteriae 1617 179
Shigella boydii Sb227 205
Salmonella bongori N268-08 24
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 38
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 18
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 14
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 28
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 34
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 17
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 54
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 19
Salmonella enterica subsp. enterica serovar Newport str. SL254 22
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 16
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 25
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 25
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 18
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 22
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 24
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 32
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 18
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 20
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 21
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 22
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 18
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 20
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 24
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 18
Salmonella enterica subsp. enterica serovar Typhi str. CT18 27
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 16
Salmonella enterica serovar Bovismorbificans genomics 18
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 16
Salmonella enterica subsp. enterica serovar Agona str. 24249 21
Salmonella enterica subsp. enterica serovar Agona str. SL483 33
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 27
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 18
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 18
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 16
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 19
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 20
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 24
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 23
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 18
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 20
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 19
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 17
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 16
Klebsiella oxytoca KCTC 1686 15
Klebsiella pneumoniae JM45 36
Klebsiella pneumoniae CG43 21
Klebsiella pneumoniae KCTC 2242 37
Klebsiella pneumoniae 342 20
Klebsiella pneumoniae subsp. pneumoniae 1084 24
Klebsiella pneumoniae subsp. pneumoniae HS11286 41
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 38
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 82
Enterobacter aerogenes EA1509E 23
Escherichia coli E24377A 39
Escherichia coli E. coli PMV-1 21
Escherichia coli JJ1886 38
Escherichia coli LY180 45
Escherichia coli APEC O78 31
Escherichia coli O7:K1 str. CE10 85
Escherichia coli O104:H4 str. 2009EL-2050 40
Escherichia coli O104:H4 str. 2009EL-2071 40
Escherichia coli O104:H4 str. 2011C-3493 41
Escherichia coli NA114 35
Escherichia coli P12b 47
Escherichia coli str. 'clone D i2' 34
Escherichia coli str. 'clone D i14' 34
Escherichia coli UM146 31
Escherichia coli 042 34
Escherichia coli Xuzhou21 43
Escherichia coli IHE3034 20
Escherichia coli UMNK88 57
Escherichia coli O83:H1 str. NRG 857C 22
Escherichia coli ABU 83972 42
Escherichia coli KO11FL 24
Escherichia coli KO11FL 24
Escherichia coli LF82 17
Escherichia coli ED1a 25
Escherichia coli IAI39 106
Escherichia coli UMN026 38
Escherichia coli 55989 37
Escherichia coli S88 32
Escherichia coli IAI1 20
Escherichia coli W 24
Escherichia coli W 24
Escherichia coli DH1 33
Escherichia coli DH1 33
Escherichia coli ATCC 8739 32
Escherichia coli BL21(DE3) 43
Escherichia coli BL21(DE3) 43
Escherichia coli SMS-3-5 50
Escherichia coli SE15 29
Escherichia coli SE11 24
Escherichia coli APEC O1 44
Escherichia coli O103:H2 str. 12009 51
Escherichia coli UTI89 30
Escherichia coli 536 51
Escherichia coli HS 29
Escherichia coli ETEC H10407 50
Escherichia coli O55:H7 str. RM12579 29
Escherichia coli O55:H7 str. CB9615 30
Escherichia coli O26:H11 str. 11368 30
Escherichia coli CFT073 47
Escherichia coli O111:H- str. 11128 75
Escherichia coli O127:H6 str. E2348/69 56
Escherichia coli O157:H7 str. TW14359 52
Escherichia coli O157:H7 str. EC4115 48
Escherichia coli O157:H7 str. Sakai 45
Escherichia coli O157:H7 str. EDL933 51
Escherichia coli str. K-12 substr. MDS42 13
Escherichia coli BW2952 36
Escherichia coli str. K-12 substr. MG1655 33
Escherichia coli str. K-12 substr. W3110 38
Escherichia coli str. K-12 substr. DH10B 34
Escherichia coli B str. REL606 34
Enterobacter cloacae SCF1 23
Enterobacter cloacae EcWSU1 13
Enterobacter cloacae subsp. cloacae ENHKU01 13
Enterobacter cloacae subsp. cloacae NCTC 9394 16
Enterobacter cloacae subsp. cloacae ATCC 13047 75
Azotobacter vinelandii CA6 46
Azotobacter vinelandii CA 47
Pseudomonas denitrificans ATCC 13867 29
Pseudomonas syringae pv. phaseolicola 1448A 26
Pseudomonas syringae pv. syringae B728a 29
Pseudomonas stutzeri CCUG 29243 20
Pseudomonas stutzeri DSM 10701 26
Pseudomonas stutzeri DSM 4166 25
Pseudomonas stutzeri RCH2 17
Pseudomonas stutzeri ATCC 17588 = LMG 11199 34
Pseudomonas monteilii SB3101 32
Pseudomonas monteilii SB3078 34
Pseudomonas putida H8234 21
Pseudomonas putida HB3267 23
Pseudomonas putida NBRC 14164 17
Pseudomonas putida DOT-T1E 19
Pseudomonas putida S16 29
Pseudomonas putida BIRD-1 17
Pseudomonas putida W619 18
Pseudomonas putida ND6 26
Pseudomonas putida KT2440 28
Pseudomonas putida GB-1 21
Pseudomonas protegens CHA0 15
Pseudomonas poae RE*1-1-14 19
Pseudomonas fluorescens F113 22
Pseudomonas fluorescens A506 29
Pseudomonas fluorescens R124 27
Pseudomonas fluorescens Pf0-1 22
Pseudomonas resinovorans NBRC 106553 26
Pseudomonas mendocina NK-01 18
Pseudomonas aeruginosa SCV20265 25
Pseudomonas aeruginosa MTB-1 17
Pseudomonas aeruginosa LES431 20
Pseudomonas aeruginosa RP73 19
Pseudomonas aeruginosa B136-33 21
Pseudomonas aeruginosa PA1R 21
Pseudomonas aeruginosa PA1 22
Pseudomonas aeruginosa DK2 26
Pseudomonas aeruginosa NCGM2.S1 32
Pseudomonas aeruginosa M18 17
Pseudomonas aeruginosa LESB58 19
Pseudomonas aeruginosa PA7 36
Pseudomonas aeruginosa PAO1 21
Acinetobacter genomosp. 13TU RUH2624 21
Acinetobacter sp. SH024 37
Acinetobacter calcoaceticus ruh2202 14
Acinetobacter baumannii ZW85-1 17
Acinetobacter baumannii TYTH-1 28
Acinetobacter baumannii BJAB0868 47
Acinetobacter baumannii BJAB0715 61
Acinetobacter baumannii BJAB07104 56
Acinetobacter baumannii TCDC-AB0715 24
Acinetobacter baumannii D1279779 12
Acinetobacter baumannii MDR-TJ 57
Acinetobacter baumannii 1656-2 58
Acinetobacter baumannii ATCC 19606 14
Acinetobacter baumannii AB307-0294 12
Acinetobacter baumannii AYE 62
Acinetobacter baumannii SDF 155
Acinetobacter baumannii MDR-ZJ06 48
Acinetobacter baumannii AB0057 30
Acinetobacter baumannii ACICU 31
Acinetobacter radioresistens SH164 20
Acinetobacter junii SH205 27
Acinetobacter johnsonii SH046 33
Acinetobacter lwoffii SH145 44
Methylophaga sp. JAM7 15
Cycloclasticus zancles 7-ME 25
Francisella noatunensis subsp. orientalis LADL--07-285A 8
Francisella tularensis subsp. mediasiatica FSC147 10
Francisella tularensis subsp. holarctica F92 65
Francisella tularensis subsp. holarctica FTNF002-00 60
Francisella tularensis subsp. holarctica OSU18 47
Francisella tularensis subsp. holarctica LVS 60
Francisella tularensis subsp. holarctica FSC200 10
Francisella tularensis subsp. tularensis TIGB03 10
Francisella tularensis subsp. tularensis TI0902 10
Francisella tularensis subsp. tularensis NE061598 10
Francisella tularensis subsp. tularensis FSC198 10
Francisella tularensis subsp. tularensis SCHU S4 10
Francisella cf. novicida Fx1 10
Candidatus Nitrososphaera gargensis Ga9.2 14
Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 4
Caldisphaera lagunensis DSM 15908 3
Aeropyrum camini SY1 = JCM 12091 3
Sulfolobus islandicus LAL14/1 4
Sulfolobus islandicus REY15A 8
Sulfolobus islandicus HVE10/4 9
Sulfolobus islandicus Y.G.57.14 6
Sulfolobus islandicus L.S.2.15 6
Sulfolobus islandicus M.16.27 17
Sulfolobus islandicus M.14.25 16
Sulfolobus islandicus M.16.4 11
Sulfolobus islandicus L.D.8.5 5
Sulfolobus solfataricus 98/2 43
Sulfolobus acidocaldarius SUSAZ 4
Sulfolobus acidocaldarius Ron12/I 4
Sulfolobus acidocaldarius N8 4
Methanomethylovorans hollandica DSM 15978 7
Methanolobus psychrophilus R15 23
Methanosarcina mazei Tuc01 5
Methanoregula formicica Methanoregula formicicum SMSP 8
Archaeoglobus sulfaticallidus PM70-1 9
Thermococcus sp. AM4 2
Thermococcus sp. CL1 2
Thermococcus litoralis DSM 5473 3
Pyrococcus sp. NA2 2
Pyrococcus furiosus DSM 3638 25
Candidatus Methanomethylophilus alvus Mx1201 11
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 5
Ferroplasma acidarmanus fer1 30
Halovivax ruber XH-70 7
Natrinema pellirubrum DSM 15624 34
Natronococcus occultus SP4 13
Natronobacterium gregoryi SP2 29
Haloquadratum walsbyi C23 28
Halorhabdus tiamatea SARL4B 20
Natronomonas moolapensis 8.8.11 25
Haloarcula hispanica N601 12
Methanococcus maripaludis X1 6
Methanococcus maripaludis C6 6
Methanococcus maripaludis C7 6
Methanococcus maripaludis S2 6
Methanobacterium sp. SWAN-1 4
Genome Number
Homo sapiens 69_37 72
Pan troglodytes 69_2.1.4 57
Gorilla gorilla 69_3.1 70
Pongo abelii 69_2 62
Nomascus leucogenys 69_1.0 62
Macaca mulatta 69_1 60
Callithrix jacchus 69_3.2.1 58
Tarsius syrichta 69_1 39
Otolemur garnettii 69_3 57
Microcebus murinus 69_1 45
Rattus norvegicus 69_3.4 54
Mus musculus 69_38 53
Dipodomys ordii 69_1 42
Ictidomys tridecemlineatus 69_2 57
Cavia porcellus 69_3 55
Oryctolagus cuniculus 69_2 51
Ochotona princeps 69 42
Tupaia belangeri 69 41
Sus scrofa 69_10.2 59
Bos taurus 69_3.1 55
Vicugna pacos 69_1 33
Tursiops truncatus 69_1 52
Mustela putorius furo 69_1.0 62
Ailuropoda melanoleuca 69_1 57
Canis familiaris 69_3.1 58
Felis catus 69 46
Equus caballus 69_2 59
Myotis lucifugus 69_2.0 63
Pteropus vampyrus 69_1 53
Sorex araneus 69_1 38
Erinaceus europaeus 69 35
Procavia capensis 69_1 49
Loxodonta africana 69_3 52
Echinops telfairi 69 36
Dasypus novemcinctus 69_2 41
Choloepus hoffmanni 69_1 36
Macropus eugenii 69_1.0 44
Sarcophilus harrisii 69_7.0 51
Monodelphis domestica 69_5 143
Ornithorhynchus anatinus 69_5 50
Petromyzon marinus 69_7.0 37
Meleagris gallopavo 69_2 41
Gallus gallus 69_2 38
Taeniopygia guttata 69_3.2.4 58
Pelodiscus sinensis 69_1.0 259
Anolis carolinensis 69_2.0 75
Xenopus tropicalis 69_4.2 70
Latimeria chalumnae 69_1 520
Gadus morhua 69_1 117
Tetraodon nigroviridis 69_8 55
Takifugu rubripes 69_4 62
Gasterosteus aculeatus 69_1 74
Oryzias latipes 69_1 69
Xiphophorus maculatus 69_4.4.2 67
Oreochromis niloticus 69_1.0 147
Danio rerio 69_9 95
Ciona savignyi 69_2.0 49
Ciona intestinalis 69 49
Drosophila melanogaster 69_5 32
Caenorhabditis elegans 69_215 84
Saccharomyces cerevisiae 69_4 64
Arabidopsis thaliana 10 135
Genome Number
simHC - Simulated High Complexity Metagenome 659
simMC - Simulated Medium Complexity Metagenome 439
simLC - Simulated Low Complexity Metagenome 404
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 228
5_Below_upper_mesopelagic 23
Olavius algarvensis endosymbiont metagenome Delta1 118
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 215
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top 605
2_Base_of_chrolophyll_max 16
Methylotrophic community from Lake Washington sediment Formate enrichment 103
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 197
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil 507
Nymph Lake Bulk Water 8
Guerrero Negro salt ponds hypersaline mat 08(T) 82
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) 500
Crater Hills 3
Guerrero Negro salt ponds hypersaline mat 05(O) 79
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime 182
Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring 462
4_Deep_abyss 71
Air microbial communities Singapore indoor air filters 2 169
Uranium Contaminated Groundwater FW106 59
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga 155
Bath Hot Springs, filamentous community 37
Sludge/US, Jazz Assembly 150
4_050719Q 346
Dump bottom (Dump bottom) 1714
7_Oxygen_minimum_layer 30
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 144
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots 264
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) 1509
Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge 27
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 142
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may 240
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) 994
6_Upper_euphotic 26
Olavius algarvensis endosymbiont metagenome Gamma1 129
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer 235
The Salmonella enterica Pan-genome 696
1_Upper_euphotic 25
Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr 118
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< 223
Endophytic microbiome from Rice 643
3_Below_base_of_euphotic 23
Bath Hot Springs, planktonic community 116
Sludge/Australian, Phrap Assembly 209
Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined 538
Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 9
Marine anammox bioreactor enriched for Scalindua species 98
Olavius algarvensis endosymbiont metagenome Gamma3 188
Cyphomyrmex longiscapus fungus garden 507
Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 7
Guerrero Negro salt ponds hypersaline mat 07(S) 80
Combined 498
Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids 2
Guerrero Negro salt ponds hypersaline mat 02(H) 73
Termite Protist Endosymbiont Community 175
Hindgut microbiome of Nasutitermes sp. (Costa Rica) 449
Guerrero Negro salt ponds hypersaline mat 09(Y) 69
3_050719R 167
Methylotrophic community from Lake Washington sediment Methanol enrichment 439
Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring 55
Activated sludge plasmid pool Visp-2009 (Newbler) 153
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu 379
Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin 34
1_050719N 149
Fungus garden combined (combined) 324
Methylotrophic community from Lake Washington sediment combined (v2) 1627
Mouse Gut Community lean3 29
2_050719S 144
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring 256
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- 1361
Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California 27
Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring 135
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) 237
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) 882
Mouse Gut Community ob2 25
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) 125
Methylotrophic community from Lake Washington sediment Methylamine enrichment 233
Oak Ridge Pristine Groundwater FRC FW301 673
Mouse Gut Community lean1 24
Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs 120
Sludge/US, Phrap Assembly 219
Atta cephalotes fungus garden (ACEF) 610
Olavius algarvensis endosymbiont metagenome Delta4 17
Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring 112
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) 206
Wastewater Terephthalate-degrading communities from Bioreactor 512
Single-cell genome from subgingival tooth surface TM7a 8
Guerrero Negro salt ponds hypersaline mat 01(G) 97
Soil microbial communities from Minnesota Farm 501
Single-cell genome from subgingival tooth surface TM7c 3
Guerrero Negro salt ponds hypersaline mat 03(I) 80
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex 188
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment 464
Guerrero Negro salt ponds hypersaline mat 06(P) 72
Activated sludge plasmid pool Morges-2009 (Newbler) 173
Methylotrophic community from Lake Washington sediment Methane enrichment 446
Guerrero Negro salt ponds hypersaline mat 04(N) 62
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg 159
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 422
Guerrero Negro salt ponds hypersaline mat 10(Z) 49
Human Gut Community Subject 7 151
Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin 369
Global Ocean Sampling Expedition (GOS) 29772
Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs 33
Air microbial communities Singapore indoor air filters 1 145
5_050719P 277
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ 1618
Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills 28
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 142
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats 243
Dump top (Dump top) 1303
Mouse Gut Community ob1 26
Human Gut Community Subject 8 133
Freshwater propionate enrichment of Brocadia fulgida 237
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- 833
Mouse Gut Community lean2 25
Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region 121