Domain architecture in genomes

The selected domain architecture is the occurrence of the following superfamily domains

GroES-like View domain combination »

NAD(P)-binding Rossmann-fold domains View domain combination »

Genome Number
Homo sapiens 76_38 36
Pan troglodytes 76_2.1.4 7
Gorilla gorilla 76_3.1 14
Pongo abelii 76_2 10
Tarsius syrichta 76_1 9
Nomascus leucogenys 76_1.0 9
Papio anubis 76 9
Macaca mulatta 76_1 11
Callithrix jacchus 76_3.2.1 16
Otolemur garnettii 76_3 10
Microcebus murinus 76_1 9
Physcomitrella patens subsp. patens 22 47
Rattus norvegicus 76_5.0 11
Mus musculus 76_38 18
Dipodomys ordii 76_1 5
Ictidomys tridecemlineatus 76_2 8
Heterocephalus glaber v1.7-2 5
Cavia porcellus 76_3 8
Oryctolagus cuniculus 76_2 10
Ochotona princeps 76 11
Tupaia belangeri 76 9
Sus scrofa 76_10.2 5
Bos taurus 76_3.1 9
Ovis aries 76_3.1 11
Vicugna pacos 76_1 4
Tursiops truncatus 76_1 10
Mustela putorius furo 76_1.0 9
Ailuropoda melanoleuca 76_1 10
Canis familiaris 76_3.1 10
Felis catus 76_6.2 10
Equus caballus 76_2 8
Myotis lucifugus 76_2.0 13
Pteropus vampyrus 76_1 8
Sorex araneus 76_1 6
Erinaceus europaeus 76 7
Procavia capensis 76_1 10
Loxodonta africana 76_3 12
Echinops telfairi 76 8
Dasypus novemcinctus 76_2 14
Choloepus hoffmanni 76_1 7
Macropus eugenii 76_1.0 9
Sarcophilus harrisii 76_7.0 10
Monodelphis domestica 76_5 6
Ornithorhynchus anatinus 76_5 8
Saccoglossus kowalevskii v3.0 27
Petromyzon marinus 76_7.0 5
Meleagris gallopavo 76_2 10
Gallus gallus 76_4 9
Anas platyrhynchos 76_1.0 11
Taeniopygia guttata 76_3.2.4 9
Ficedula albicollis 76_1.0 7
Pelodiscus sinensis 76_1.0 10
Anolis carolinensis 76_2.0 8
Xenopus laevis 17
Xenopus tropicalis 76_4.2 10
Latimeria chalumnae 76_1 11
Lepisosteus oculatus 76 10
Gadus morhua 76_1 10
Tetraodon nigroviridis 76_8 14
Takifugu rubripes 76_4 9
Gasterosteus aculeatus 76_1 12
Oryzias latipes 76_1 5
Xiphophorus maculatus 76_4.4.2 7
Poecilia formosa 76 8
Oreochromis niloticus 76_1.0 6
Astyanax mexicanus 76 9
Danio rerio 76_9 10
Oikopleura dioica 9
Ciona savignyi 76_2.0 11
Ciona intestinalis 76 14
Strongylocentrotus purpuratus v3.1 10
Adineta vaga 83
Octopus bimaculoides 280 9
Crassostrea gigas 22 5
Lottia gigantea 17
Helobdella robusta 6
Capitella sp. I 21
Danaus plexippus OGS1.0 9
Heliconius melpomene 7
Bombyx mori 8
Nasonia vitripennis 4
Apis mellifera 38.2d 11
Harpegnathos saltator v3.3 4
Linepithema humile v1.1 4
Pogonomyrmex barbatus v1.2 3
Solenopsis invicta v.2.2.3 4
Acromyrmex echinatior v3.8 4
Atta cephalotes v1.1 6
Camponotus floridanus v3.3 6
Lucilia cuprina 3
Drosophila grimshawi 1.3 4
Drosophila willistoni 1.3 5
Drosophila pseudoobscura 2.13 4
Drosophila persimilis 1.3 4
Drosophila suzukii 2
Drosophila yakuba 1.3 4
Drosophila simulans 1.3 5
Drosophila sechellia 1.3 4
Drosophila melanogaster 76_5 6
Drosophila erecta 1.3 4
Drosophila ananassae 1.3 4
Drosophila virilis 1.2 4
Drosophila mojavensis 1.3 3
Megaselia scalaris 22 5
Aedes aegypti 55 7
Culex pipiens quinquefasciatus 9
Anopheles darlingi 22 5
Anopheles gambiae 49_3j 7
Tribolium castaneum 3.0 10
Pediculus humanus corporis 5
Acyrthosiphon pisum 7
Rhodnius prolixus 22 6
Daphnia pulex 13
Strigamia maritima 22 9
Sarcoptes scabiei 6
Tetranychus urticae 7
Ixodes scapularis 11
Pristionchus pacificus 5
Meloidogyne incognita 3
Meloidogyne hapla 3
Onchocerca volvulus 22 4
Brugia malayi WS250 6
Caenorhabditis japonica 11
Caenorhabditis brenneri 12
Caenorhabditis remanei 12
Caenorhabditis elegans 76_235 10
Caenorhabditis briggsae 2 10
Trichinella spiralis 22 3
Hymenolepis microstoma 2
Echinococcus multilocularis 1
Echinococcus granulosus 1
Taenia solium 1
Schistosoma mansoni 2
Mnemiopsis leidyi 4
Acropora digitifera v1.0 6
Nematostella vectensis 1.0 13
Hydra vulgaris 10
Amphimedon queenslandica 16
Trichoplax adhaerens 20
Proterospongia sp. ATCC 50818 7
Monosiga brevicollis 10
Sphaeroforma arctica JP610 19
Capsaspora owczarzaki ATCC 30864 7
Conidiobolus coronatus NRRL28638 v1.0 30
Mortierella verticillata NRRL 6337 24
Phycomyces blakesleeanus 17
Rhizopus oryzae RA 99-880 23
Mucor circinelloides 26
Rhizomucor miehei CAU432 20
Malassezia globosa CBS 7966 24
Sporisorium reilianum 22 21
Ustilago maydis 19
Mixia osmundae IAM 14324 v1.0 18
Cronartium quercuum f. sp. fusiforme G11 v1.0 10
Puccinia graminis f. sp. tritici CRL 75-36-700-3 8
Melampsora laricis-populina 10
Rhodotorula graminis WP1 v1.0 30
Sporobolomyces roseus IAM 13481 25
Microbotryum violaceum 22 23
Wallemia sebi v1.0 13
Sphaerobolus stellatus v1.0 76
Piloderma croceum F 1598 v1.0 33
Serpula lacrymans var. lacrymans S7.9 40
Coniophora puteana 71
Hydnomerulius pinastri v2.0 31
Paxillus rubicundulus Ve08.2h10 v1.0 14
Pisolithus microcarpus 441 v1.0 23
Pisolithus tinctorius Marx 270 v1.0 20
Scleroderma citrinum Foug A v1.0 17
Coprinopsis cinerea okayama7 130 v3 27
Pleurotus ostreatus 37
Amanita thiersii Skay4041 v1.0 28
Amanita muscaria Koide v1.0 27
Galerina marginata v1.0 33
Hebeloma cylindrosporum h7 v2.0 25
Laccaria bicolor S238N-H82 25
Agaricus bisporus var. bisporus 25
Schizophyllum commune 42
Stereum hirsutum FP-91666 SS1 v1.0 76
Heterobasidion annosum 37
Gloeophyllum trabeumv1.0 55
Punctularia strigosozonata v1.0 47
Sebacina vermifera MAFF 305830 v1.0 19
Fomitiporia mediterranea v1.0 43
Tulasnella calospora AL13/4D v1.0 23
Postia placenta 79
Wolfiporia cocos MD-104 SS10 v1.0 57
Fomitopsis pinicolav1.0 56
Fomitopsis pinicola FP-58527 SS1 v3.0 50
Phanerochaete chrysosporium RP-78 2.1 51
Dichomitus squalens 59
Trametes versicolor v1.0 70
Tremella mesenterica 14
Daldinia eschscholzii EC12 v1.0 53
Apiospora montagnei NRRL 25634 v1.0 64
Magnaporthe poae ATCC 64411 22 12
Magnaporthe grisea 70-15 44
Podospora anserina 37
Sporotrichum thermophile ATCC 42464 26
Thielavia terrestris NRRL 8126 33
Chaetomium globosum CBS 148.51 35
Neurospora tetrasperma 22
Neurospora discreta FGSC 8579 22
Neurospora crassa OR74A 24
Cryphonectria parasitica 62
Verticillium albo-atrum VaMs.102 45
Verticillium dahliae VdLs.17 50
Acremonium alcalophilumv 1.0 26
Glomerella graminicola 22 53
Fusarium graminearum 62
Nectria haematococca mpVI 135
Fusarium oxysporum f. sp. lycopersici 4286 119
Fusarium verticillioides 7600 83
Trichoderma asperellum CBS 433.97 v1.0 64
Trichoderma atroviride 78
Trichoderma citrinoviride v1.0 50
Trichoderma reesei 1.2 44
Trichoderma virens Gv29-8 83
Trichoderma longibrachiatum ATCC 18648 v1.0 41
Trichoderma harzianum CBS 226.95 v1.0 98
Amorphotheca resinae v1.0 35
Botrytis cinerea B05.10 44
Sclerotinia sclerotiorum 40
Blumeria graminis 22 4
Didymella exigua CBS 183.55 v1.0 53
Leptosphaeria maculans 22 27
Setosphaeria turcica v1.0 56
Cochliobolus miyabeanus ATCC 44560 v1.0 52
Cochliobolus victoriae FI3 v1.0 52
Cochliobolus carbonum 26-R-13 v1.0 52
Cochliobolus heterostrophus 53
Alternaria brassicicola 39
Cochliobolus lunatus m118 v2.0 52
Pyrenophora teres f. teres 22 54
Pyrenophora tritici-repentis 49
Stagonospora nodorum 61
Mycosphaerella graminicola IPO323 57
Microsporum gypseum 24
Zasmidium cellare ATCC 36951 v1.0 138
Dothistroma septosporum 61
Septoria musiva v1.0 46
Mycosphaerella fijiensis CIRAD86 56
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 54
Paracoccidioides brasiliensis Pb18 15
Coccidioides posadasii RMSCC 3488 23
Coccidioides immitis RS 24
Ajellomyces dermatitidis SLH14081 28
Histoplasma capsulatum class NAmI strain WU24 19
Microsporum canis CBS 113480 23
Trichophyton equinum CBS 127.97 21
Trichophyton verrucosum HKI 0517 19
Arthroderma benhamiae CBS 112371 17
Trichophyton tonsurans CBS 112818 21
Trichophyton rubrum CBS 118892 22
Uncinocarpus reesii 1704 24
Aspergillus zonatus v1.0 57
Penicillium chrysogenum Wisconsin 54-1255 65
Penicillium chrysogenum v1.0 67
Aspergillus acidus v1.0 83
Aspergillus fumigatus Af293 47
Aspergillus brasiliensis v1.0 103
Aspergillus nidulans FGSC A4 62
Aspergillus sydowii v1.0 104
Aspergillus versicolor v1.0 108
Aspergillus glaucus 80
Aspergillus carbonarius ITEM 5010 84
Neosartorya fischeri NRRL 181 62
Aspergillus terreus NIH2624 62
Aspergillus tubingensis v1.0 88
Aspergillus wentii v1.0 95
Aspergillus oryzae RIB40 90
Aspergillus niger 22 88
Aspergillus niger ATCC 1015 73
Aspergillus flavus NRRL3357 86
Aspergillus clavatus NRRL 1 50
Penicillium marneffei ATCC 18224 52
Tuber melanosporum Mel28 22 15
Tuber melanosporum Vittad 15
Hansenula polymorpha v2.0 17
Dekkera bruxellensis CBS 2499 v2.0 14
Pichia membranifaciensv1.0 16
Candida tanzawaensis NRRL Y-17324 v1.0 19
Candida dubliniensis CD36 20
Candida tropicalis MYA-3404 19
Candida parapsilosis 18
Candida albicans SC5314 18
Lodderomyces elongisporus NRRL YB-4239 12
Babjeviella inositovora NRRL Y-12698 v1.0 26
Pichia stipitis CBS 6054 22
Candida guilliermondii ATCC 6260 22
Hyphopichia burtonii NRRL Y-1933 v1.0 23
Debaromyces hansenii 34
Wickerhamomyces anomalus 29
Pichia pastoris GS115 11
Hanseniaspora valbyensis NRRL Y-1626 v1.1 3
Yarrowia lipolytica CLIB122 18
Candida lusitaniae ATCC 42720 15
Metschnikowia bicuspidata NRRL YB-4993 v1.0 20
Vanderwaltozyma polyspora DSM 70294 13
Candida glabrata CBS138 11
Kluyveromyces thermotolerans CBS 6340 14
Lachancea kluyveri 15
Kluyveromyces waltii 15
Ashbya gossypii ATCC 10895 8
Zygosaccharomyces rouxii 12
Saccharomyces mikatae MIT 16
Saccharomyces paradoxus MIT 19
Saccharomyces cerevisiae 76 20
Saccharomyces bayanus MIT 15
Kluyveromyces lactis 11
Schizosaccharomyces cryophilus OY26 22 10
Schizosaccharomyces octosporus yFS286 10
Schizosaccharomyces japonicus yFS275 10
Schizosaccharomyces pombe 9
Catenaria anguillulae PL171 v1.0 12
Allomyces macrogynus ATCC 38327 16
Spizellomyces punctatus DAOM BR117 19
Dictyostelium discoideum 18
Dictyostelium purpureum 18
Entamoeba dispar 1.2 3
Entamoeba invadens 1.2 2
Entamoeba histolytica 1 3
Selaginella moellendorffii 58
Pinus taeda 52
Picea abies 27
Eucalyptus grandis v201 151
Theobroma cacao B97-61/B2 v1 26
Gossypium raimondii v221 108
Citrus clementina v165 67
Citrus sinensis v154 68
Thellungiella halophila v173 20
Brassica rapa Chiifu-401 1.2 23
Capsella rubella v183 20
Arabidopsis lyrata 19
Arabidopsis thaliana 10 27
Carica papaya 18
Medicago truncatula 59
Phaseolus vulgaris v186 32
Glycine max v109 64
Cucumis sativus v122 27
Fragaria vesca 39
Malus domestica v196 86
Prunus persica v139 74
Linum usitatissimum v200 41
Manihot esculenta v147 55
Populus trichocarpa v156 54
Vitis vinifera 49
Mimulus guttatus v140 34
Solanum lycopersicum v.2.3 29
Solanum tuberosum 42
Actinidia chinensis Hongyang 24
Aquilegia coerulea v195 51
Triticum urartu 22 31
Triticum aestivum 22 63
Aegilops tauschii 22 26
Brachypodium distachyon 26
Oryza barthii 22 32
Oryza meridionalis 22 25
Oryza glumaepatula 22 36
Oryza glaberrima 24
Oryza punctata 22 27
Oryza nivara 22 34
Oryza brachyantha 22 21
Oryza sativa ssp. japonica 5.0 43
Oryza sativa v193 43
Phyllostachys heterocyclavar. pubescens 16
Panicum virgatum v202 62
Setaria italica v164 27
Zea mays subsp. mays 37
Zea mays v181 42
Sorghum bicolor 24
Musa balbisiana 23
Musa acuminata 22 27
Amborella trichopoda 22 26
Physcomitrella patens 29
Coccomyxa subellipsoidea sp. C-169 v2 12
Asterochloris sp. Cgr/DA1pho v1.0 14
Chlorella variabilis sp. NC64A 9
Chlorella vulgaris 13
Volvox carteri f. nagariensis 6
Volvox carteri v199 5
Chlamydomonas reinhardtii 4.0 7
Ostreococcus sp. RCC809 6
Ostreococcus lucimarinus CCE9901 8
Ostreococcus tauri 9
Bathycoccus prasinos 4
Micromonas sp. RCC299 5
Micromonas pusilla CCMP1545 v3.0 9
Cyanidioschyzon merolae strain 10D 22 6
Cyanidioschyzon merolae 7
Porphyridium purpureum 02_2012 10
Thecamonas trahens ATCC 50062 9
Bigelowiella natans CCMP2755 22 10
Cyanophora paradoxa 4
Leishmania mexicana 2.4 9
Leishmania major strain Friedlin 8
Leishmania infantum JPCM5 2.4 10
Leishmania braziliensis MHOM/BR/75/M2904 2.4 9
Trypanosoma vivax 3
Trypanosoma cruzi strain CL Brener 4
Trypanosoma congolense 2.4 3
Trypanosoma brucei gambiense v4.1 3
Trypanosoma brucei TREU927 v4.1 3
Ectocarpus siliculosus 5
Aureococcus anophagefferens 17
Albugo laibachii 22 6
Pythium iwayamai DAOM BR242034 22 16
Pythium arrhenomanes ATCC 12531 22 21
Pythium ultimum v1.7-2 52
Pythium aphanidermatum DAOM BR444 22 19
Pythium irregulare DAOM BR486 22 26
Pythium vexans DAOM BR484 22 30
Phytophthora ramorum 1.1 40
Phytophthora sojae 1.1 37
Phytophthora infestans T30-4 41
Phytophthora capsici 46
Hyaloperonospora arabidopsidis 22 5
Phaeodactylum tricornutumCCAP 1055/1 10
Fragilariopsis cylindrus 19
Thalassiosira pseudonana CCMP1335 9
Perkinsus marinus ATCC 50983 10
Paramecium tetraurelia 20
Tetrahymena thermophila SB210 1 23
Ichthyophthirius multifiliis strain G5 5
Cryptosporidium hominis 1
Cryptosporidium muris 1
Cryptosporidium parvum Iowa II 1
Neospora caninum 1
Toxoplasma gondii VEG 0
Toxoplasma gondii ME49 0
Toxoplasma gondii GT1 0
Plasmodium yoelii ssp. yoelii 1 1
Plasmodium chabaudi 1
Plasmodium berghei ANKA 1
Symbiodinium minutum clade B1 v1.2 8
Naegleria gruberi 28
Trichomonas vaginalis 3
Guillardia theta CCMP2712 v1.0 19
Emiliania huxleyi CCMP1516 17
Genome Number
Thermobaculum terrenum ATCC BAA-798 12
Leptolyngbya sp. PCC 7376 3
Pseudanabaena sp. PCC 7367 3
Acaryochloris marina MBIC11017 13
Synechocystis sp. PCC 6803 1
Thermosynechococcus sp. NK55 3
Thermosynechococcus elongatus BP-1 3
Synechococcus sp. PCC 7502 4
Synechococcus sp. PCC 6312 5
Synechococcus sp. CC9311 0
Synechococcus elongatus PCC 7942 2
Microcoleus sp. PCC 7113 4
Trichodesmium erythraeum IMS101 5
Geitlerinema sp. PCC 7407 5
Cyanothece sp. PCC 8802 3
Gloeocapsa sp. PCC 7428 10
Halothece sp. PCC 7418 2
Microcystis aeruginosa NIES-843 3
Gloeobacter violaceus PCC 7421 12
Rivularia sp. PCC 7116 9
Calothrix sp. PCC 7507 9
Anabaena variabilis ATCC 29413 9
'Nostoc azollae' 0708 4
Nostoc sp. PCC 7107 7
Nostoc punctiforme PCC 73102 16
Nostoc sp. PCC 7120 10
Nostoc sp. PCC 7524 7
Anabaena sp. 90 4
Mycoplasma crocodyli MP145 1
Mycoplasma bovis HB0801 3
Mycoplasma penetrans HF-2 2
Mycoplasma putrefaciens KS1 1
Mycoplasma fermentans M64 1
Mycoplasma arthritidis 158L3-1 1
Mycoplasma agalactiae PG2 3
Conexibacter woesei DSM 14684 24
Eggerthella sp. YY7918 2
Slackia heliotrinireducens DSM 20476 5
Olsenella uli DSM 7084 3
Atopobium parvulum DSM 20469 1
Coriobacterium glomerans PW2 7
Rubrobacter xylanophilus DSM 9941 21
Ilumatobacter coccineus 17
Acidimicrobium ferrooxidans DSM 10331 6
Thermobispora bispora DSM 43833 5
Nakamurella multipartita DSM 44233 28
Acidothermus cellulolyticus 11B 7
Modestobacter marinus 41
Blastococcus saxobsidens DD2 19
Geodermatophilus obscurus DSM 43160 31
Kineococcus radiotolerans SRS30216 32
Catenulispora acidiphila DSM 44928 41
Stackebrandtia nassauensis DSM 44728 21
Frankia symbiont of Datisca glomerata 14
Frankia sp. EAN1pec 35
Frankia alni ACN14a 20
Thermobifida fusca YX 11
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 26
Thermomonospora curvata DSM 43183 11
Streptosporangium roseum DSM 43021 34
Kitasatospora setae KM-6054 24
Streptomyces coelicolor A3(2) 34
Streptomyces sp. PAMC26508 26
Streptomyces flavogriseus ATCC 33331 29
Streptomyces sp. SirexAA-E 33
Streptomyces griseus subsp. griseus NBRC 13350 23
Streptomyces bingchenggensis BCW-1 57
Streptomyces violaceusniger Tu 4113 59
Streptomyces avermitilis MA-4680 38
Streptomyces cattleya NRRL 8057 = DSM 46488 31
Streptomyces scabiei 87.22 33
Streptomyces hygroscopicus subsp. jinggangensis 5008 58
Actinosynnema mirum DSM 43827 41
Saccharomonospora viridis DSM 43017 11
Pseudonocardia dioxanivorans CB1190 37
Saccharopolyspora erythraea NRRL 2338 37
Amycolatopsis mediterranei U32 61
Kribbella flavida DSM 17836 34
Nocardioides sp. JS614 21
Propionibacterium propionicum F0230a 13
Propionibacterium acnes SK137 9
Microlunatus phosphovorus NM-1 28
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 8
Salinispora arenicola CNS-205 17
Salinispora tropica CNB-440 15
Verrucosispora maris AB-18-032 22
Micromonospora sp. L5 22
Micromonospora aurantiaca ATCC 27029 22
Actinoplanes sp. N902-109 42
Actinoplanes sp. SE50/110 23
Actinoplanes missouriensis 431 40
Segniliparus rotundus DSM 44985 6
Tsukamurella paurometabola DSM 20162 12
Gordonia sp. KTR9 23
Gordonia polyisoprenivorans VH2 22
Gordonia bronchialis DSM 43247 17
Rhodococcus jostii RHA1 57
Rhodococcus equi 103S 21
Rhodococcus opacus B4 45
Rhodococcus erythropolis PR4 32
Nocardia cyriacigeorgica GUH-2 19
Nocardia farcinica IFM 10152 24
Amycolicicoccus subflavus DQS3-9A1 20
Mycobacterium massiliense str. GO 06 16
Mycobacterium abscessus ATCC 19977 17
Mycobacterium sp. JLS 30
Mycobacterium intracellulare ATCC 13950 23
Mycobacterium avium 104 16
Mycobacterium vanbaalenii PYR-1 24
Mycobacterium canettii CIPT 140010059 10
Mycobacterium africanum GM041182 9
Mycobacterium tuberculosis KZN 1435 10
Mycobacterium tuberculosis 10
Mycobacterium bovis BCG str. Pasteur 1173P2 9
Mycobacterium rhodesiae NBB3 30
Mycobacterium ulcerans Agy99 15
Mycobacterium gilvum PYR-GCK 29
Mycobacterium chubuense NBB4 23
Mycobacterium marinum M 27
Mycobacterium smegmatis str. MC2 155 50
Mycobacterium leprae Br4923 3
Corynebacterium resistens DSM 45100 3
Corynebacterium aurimucosum ATCC 700975 4
Corynebacterium kroppenstedtii DSM 44385 3
Corynebacterium efficiens YS-314 7
Corynebacterium ulcerans 0102 5
Corynebacterium urealyticum DSM 7109 3
Corynebacterium jeikeium K411 2
Corynebacterium variabile DSM 44702 11
Corynebacterium pseudotuberculosis 316 5
Corynebacterium glutamicum R 12
Corynebacterium diphtheriae NCTC 13129 4
Tropheryma whipplei TW08/27 1
Sanguibacter keddieii DSM 10542 17
Kytococcus sedentarius DSM 20547 8
Beutenbergia cavernae DSM 12333 17
Leifsonia xyli subsp. xyli str. CTCB07 6
Microbacterium testaceum StLB037 13
Clavibacter michiganensis subsp. michiganensis NCPPB 382 15
Jonesia denitrificans DSM 20603 7
Intrasporangium calvum DSM 43043 17
Brachybacterium faecium DSM 4810 16
Isoptericola variabilis 225 8
Xylanimonas cellulosilytica DSM 15894 7
Cellulomonas flavigena DSM 20109 9
Cellulomonas fimi ATCC 484 13
[Cellvibrio] gilvus ATCC 13127 9
Arthrobacter phenanthrenivorans Sphe3 19
Arthrobacter chlorophenolicus A6 18
Arthrobacter aurescens TC1 18
Arthrobacter arilaitensis Re117 11
Kocuria rhizophila DC2201 11
Rothia mucilaginosa DY-18 5
Rothia dentocariosa ATCC 17931 12
Arthrobacter sp. Rue61a 21
Arthrobacter sp. FB24 23
Renibacterium salmoninarum ATCC 33209 10
Micrococcus luteus NCTC 2665 8
Bifidobacterium longum subsp. longum JDM301 2
Bifidobacterium animalis subsp. lactis Bl-04 1
Bifidobacterium dentium Bd1 4
Bifidobacterium breve ACS-071-V-Sch8b 4
Bifidobacterium bifidum S17 2
Bifidobacterium adolescentis ATCC 15703 3
Arcanobacterium haemolyticum DSM 20595 2
Mobiluncus curtisii ATCC 43063 2
Actinomyces sp. F0330 7
Caldilinea aerophila DSM 14535 = NBRC 104270 16
Dehalococcoides ethenogenes 195 1
Dehalococcoides sp. BAV1 1
Dehalogenimonas lykanthroporepellens BL-DC-9 1
Anaerolinea thermophila UNI-1 3
Thermomicrobium roseum DSM 5159 4
Sphaerobacter thermophilus DSM 20745 6
Herpetosiphon aurantiacus DSM 785 11
Roseiflexus sp. RS-1 8
Roseiflexus castenholzii DSM 13941 10
Chloroflexus sp. MS-G 9
Chloroflexus sp. Y-400-fl 10
Chloroflexus aggregans DSM 9485 7
Chloroflexus aurantiacus J-10-fl 10
Truepera radiovictrix DSM 17093 13
Deinococcus gobiensis I-0 11
Deinococcus deserti VCD115 7
Deinococcus maricopensis DSM 21211 10
Deinococcus geothermalis DSM 11300 8
Deinococcus proteolyticus MRP 4
Deinococcus radiodurans R1 5
Oceanithermus profundus DSM 14977 3
Marinithermus hydrothermalis DSM 14884 3
Meiothermus silvanus DSM 9946 10
Meiothermus ruber DSM 1279 9
Thermus sp. CCB_US3_UF1 8
Thermus scotoductus SA-01 8
Thermus thermophilus HB27 8
Anaerococcus prevotii DSM 20548 1
Megasphaera elsdenii DSM 20460 0
Acidaminococcus intestini RyC-MR95 2
Acidaminococcus fermentans DSM 20731 1
Selenomonas sputigena ATCC 35185 1
Selenomonas ruminantium subsp. lactilytica TAM6421 1
Erysipelothrix rhusiopathiae str. Fujisawa 1
Natranaerobius thermophilus JW/NM-WN-LF 4
Symbiobacterium thermophilum IAM 14863 2
Clostridiales genomosp. BVAB3 str. UPII9-5 1
Clostridium cellulolyticum H10 7
Clostridium thermocellum ATCC 27405 2
Ethanoligenens harbinense YUAN-3 1
Faecalibacterium prausnitzii 1
Ruminococcus sp. 4
Ruminococcus bromii 2
Thermaerobacter marianensis DSM 12885 8
Sulfobacillus acidophilus DSM 10332 8
Oscillibacter valericigenes Sjm18-20 4
butyrate-producing bacterium SS3/4 3
Pelotomaculum thermopropionicum SI 4
Desulfosporosinus acidiphilus SJ4 2
Desulfosporosinus orientis DSM 765 7
Dehalobacter sp. DCA 1
Syntrophobotulus glycolicus DSM 8271 1
Desulfitobacterium hafniense Y51 2
Desulfitobacterium dehalogenans ATCC 51507 1
Desulfotomaculum reducens MI-1 1
Desulfotomaculum acetoxidans DSM 771 2
Desulfotomaculum kuznetsovii DSM 6115 1
Desulfotomaculum carboxydivorans CO-1-SRB 2
Desulfotomaculum ruminis DSM 2154 5
Acetobacterium woodii DSM 1030 2
Eubacterium eligens ATCC 27750 1
Eubacterium limosum KIST612 8
Clostridium difficile 630 5
Clostridium sticklandii DSM 519 2
Clostridium saccharolyticum WM1 2
Clostridium phytofermentans ISDg 1
[Ruminococcus] obeum 2
[Ruminococcus] torques 8
Eubacterium rectale M104/1 1
Eubacterium rectale ATCC 33656 1
Roseburia intestinalis 1
Butyrivibrio proteoclasticus B316 2
Butyrivibrio fibrisolvens 1
Syntrophothermus lipocalidus DSM 12680 2
Syntrophomonas wolfei subsp. wolfei str. Goettingen 1
Alkaliphilus oremlandii OhILAs 1
Alkaliphilus metalliredigens QYMF 5
Clostridium sp. BNL1100 7
Clostridium novyi NT 1
Clostridium ljungdahlii DSM 13528 6
Clostridium kluyveri DSM 555 1
Clostridium beijerinckii NCIMB 8052 8
Clostridium perfringens ATCC 13124 1
Clostridium cellulovorans 743B 1
Clostridium botulinum A str. ATCC 3502 3
Clostridium acetobutylicum ATCC 824 1
Mahella australiensis 50-1 BON 6
Thermosediminibacter oceani DSM 16646 3
Caldicellulosiruptor obsidiansis OB47 4
Caldicellulosiruptor kronotskyensis 2002 5
Caldicellulosiruptor hydrothermalis 108 2
Caldicellulosiruptor owensensis OL 4
Caldicellulosiruptor lactoaceticus 6A 2
Caldicellulosiruptor kristjanssonii 177R1B 2
Caldicellulosiruptor saccharolyticus DSM 8903 3
Caldicellulosiruptor bescii DSM 6725 3
Thermoanaerobacterium xylanolyticum LX-11 1
Thermoanaerobacterium thermosaccharolyticum DSM 571 3
Thermodesulfobium narugense DSM 14796 1
Coprothermobacter proteolyticus DSM 5265 1
Tepidanaerobacter acetatoxydans Re1 10
Thermoanaerobacter tengcongensis MB4 4
Carboxydothermus hydrogenoformans Z-2901 1
Moorella thermoacetica ATCC 39073 2
Ammonifex degensii KC4 1
Thermoanaerobacter mathranii subsp. mathranii str. A3 1
Thermoanaerobacter pseudethanolicus ATCC 33223 3
Thermoanaerobacter sp. X514 3
Thermoanaerobacter italicus Ab9 1
Thermoanaerobacter wiegelii Rt8.B1 5
Thermoanaerobacter brockii subsp. finnii Ako-1 3
Acetohalobium arabaticum DSM 5501 2
Halothermothrix orenii H 168 2
Halanaerobium hydrogeniformans 4
Halanaerobium praevalens DSM 2228 3
Carnobacterium sp. 17-4 4
Carnobacterium sp. WN1359 5
Aerococcus urinae ACS-120-V-Col10a 1
Tetragenococcus halophilus NBRC 12172 10
Melissococcus plutonius DAT561 3
Enterococcus sp. 7L76 2
Enterococcus hirae ATCC 9790 5
Enterococcus faecium Aus0004 6
Enterococcus faecalis 62 3
Weissella koreensis KACC 15510 10
Oenococcus oeni PSU-1 10
Leuconostoc sp. C2 8
Leuconostoc kimchii IMSNU 11154 7
Leuconostoc citreum KM20 6
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 5
Leuconostoc gasicomitatum LMG 18811 7
Lactobacillus casei ATCC 334 8
Lactobacillus kefiranofaciens ZW3 1
Lactobacillus crispatus ST1 1
Lactobacillus rhamnosus Lc 705 8
Lactobacillus sanfranciscensis TMW 1.1304 4
Lactobacillus salivarius CECT 5713 4
Lactobacillus ruminis ATCC 27782 1
Lactobacillus fermentum IFO 3956 9
Lactobacillus amylovorus GRL1118 1
Lactobacillus sakei subsp. sakei 23K 10
Lactobacillus reuteri DSM 20016 6
Lactobacillus plantarum JDM1 16
Lactobacillus buchneri NRRL B-30929 15
Lactobacillus buchneri 17
Lactobacillus brevis ATCC 367 10
Lactobacillus acidophilus 30SC 1
Pediococcus claussenii ATCC BAA-344 4
Pediococcus pentosaceus ATCC 25745 5
Lactococcus garvieae ATCC 49156 4
Lactococcus lactis subsp. cremoris MG1363 5
Streptococcus sp. I-P16 5
Streptococcus sp. I-G2 4
Streptococcus intermedius JTH08 3
Streptococcus gallolyticus UCN34 4
Streptococcus pseudopneumoniae IS7493 4
Streptococcus pasteurianus ATCC 43144 6
Streptococcus equi subsp. equi 4047 2
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1
Streptococcus macedonicus ACA-DC 198 1
Streptococcus mitis B6 4
Streptococcus uberis 0140J 3
Streptococcus parauberis KCTC 11537 5
Streptococcus parasanguinis ATCC 15912 4
Streptococcus pyogenes str. Manfredo 2
Streptococcus pneumoniae P1031 5
Streptococcus agalactiae A909 2
Streptococcus mutans NN2025 4
Streptococcus thermophilus LMD-9 1
Streptococcus suis P1/7 3
Streptococcus sanguinis SK36 4
Streptococcus oralis Uo5 2
Streptococcus gordonii str. Challis substr. CH1 5
Exiguobacterium sp. MH3 12
Exiguobacterium sp. AT1b 9
Exiguobacterium sibiricum 255-15 11
Kyrpidia tusciae DSM 2912 11
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 12
Brevibacillus brevis NBRC 100599 8
Paenibacillus sp. JDR-2 13
Paenibacillus terrae HPL-003 11
Paenibacillus mucilaginosus 3016 20
Paenibacillus polymyxa M1 9
Bacillus selenitireducens MLS10 4
Listeria welshimeri serovar 6b str. SLCC5334 7
Listeria innocua Clip11262 8
Listeria seeligeri serovar 1/2b str. SLCC3954 7
Listeria monocytogenes serotype 4b str. CLIP 80459 8
Listeria ivanovii subsp. ivanovii PAM 55 8
Solibacillus silvestris StLB046 11
Geobacillus thermoglucosidasius C56-YS93 6
Lysinibacillus sphaericus C3-41 6
Oceanobacillus iheyensis HTE831 11
Anoxybacillus flavithermus WK1 2
Geobacillus thermoleovorans CCB_US3_UF5 5
Geobacillus kaustophilus HTA426 4
Geobacillus sp. GHH01 4
Geobacillus sp. WCH70 6
Geobacillus thermodenitrificans NG80-2 3
Halobacillus halophilus DSM 2266 10
Bacillus sp. JS 10
butyrate-producing bacterium SSC/2 8
Bacillus sp. 1NLA3E 9
Bacillus amyloliquefaciens FZB42 14
Bacillus atrophaeus 1942 10
Bacillus subtilis subsp. subtilis str. 168 9
Bacillus licheniformis DSM 13 = ATCC 14580 7
Bacillus halodurans C-125 10
Bacillus weihenstephanensis KBAB4 12
Bacillus thuringiensis str. Al Hakam 11
Bacillus cereus 03BB102 12
Bacillus anthracis str. A0248 13
Bacillus pseudofirmus OF4 8
Bacillus clausii KSM-K16 13
Bacillus cellulosilyticus DSM 2522 3
Bacillus pumilus SAFR-032 8
Bacillus megaterium DSM 319 14
Bacillus coagulans 2-6 5
Macrococcus caseolyticus JCSC5402 3
Staphylococcus pseudintermedius HKU10-03 4
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 8
Staphylococcus lugdunensis HKU09-01 7
Staphylococcus haemolyticus JCSC1435 6
Staphylococcus epidermidis RP62A 7
Staphylococcus carnosus subsp. carnosus TM300 8
Staphylococcus aureus subsp. aureus JH1 9
Staphylococcus aureus 8
Candidatus Cloacamonas acidaminovorans 1
Gemmatimonas aurantiaca T-27 7
Melioribacter roseus P3M 1
Ignavibacterium album JCM 16511 3
Pelodictyon phaeoclathratiforme BU-1 2
Chlorobium luteolum DSM 273 3
Chlorobium chlorochromatii CaD3 2
Chlorobium phaeobacteroides DSM 266 2
Chlorobium phaeovibrioides DSM 265 3
Chlorobium limicola DSM 245 3
Chlorobaculum parvum NCIB 8327 4
Chlorobium tepidum TLS 3
Chloroherpeton thalassium ATCC 35110 4
Prosthecochloris aestuarii DSM 271 4
Haliscomenobacter hydrossis DSM 1100 12
Saprospira grandis str. Lewin 3
Niastella koreensis GR20-10 10
Chitinophaga pinensis DSM 2588 24
Salinibacter ruber M8 4
Rhodothermus marinus DSM 4252 6
Flexibacter litoralis DSM 6794 3
Belliella baltica DSM 15883 3
Cyclobacterium marinum DSM 745 12
Marivirga tractuosa DSM 4126 8
Fibrella aestuarina 15
Leadbetterella byssophila DSM 17132 4
Dyadobacter fermentans DSM 18053 10
Cytophaga hutchinsonii ATCC 33406 3
Spirosoma linguale DSM 74 19
Runella slithyformis DSM 19594 10
Parabacteroides distasonis ATCC 8503 2
Tannerella forsythia ATCC 43037 1
Paludibacter propionicigenes WB4 3
Odoribacter splanchnicus DSM 20712 2
Bacteroides sp. CF50 2
Prevotella melaninogenica ATCC 25845 1
Prevotella denticola F0289 1
Prevotella ruminicola 23 1
Porphyromonas asaccharolytica DSM 20707 1
Porphyromonas gingivalis ATCC 33277 1
Bacteroides salanitronis DSM 18170 2
Bacteroides helcogenes P 36-108 0
Bacteroides vulgatus ATCC 8482 2
Bacteroides thetaiotaomicron VPI-5482 3
Bacteroides fragilis YCH46 1
Pedobacter saltans DSM 12145 3
Solitalea canadensis DSM 3403 6
Pedobacter heparinus DSM 2366 4
Sphingobacterium sp. 21 9
Fluviicola taffensis DSM 16823 5
Owenweeksia hongkongensis DSM 17368 3
Zunongwangia profunda SM-A87 6
Krokinobacter sp. 4H-3-7-5 1
Gramella forsetii KT0803 5
Lacinutrix sp. 5H-3-7-4 3
Maribacter sp. HTCC2170 5
Croceibacter atlanticus HTCC2559 3
Aequorivita sublithincola DSM 14238 2
Zobellia galactanivorans 6
Muricauda ruestringensis DSM 13258 1
Cellulophaga algicola DSM 14237 4
Cellulophaga lytica DSM 7489 4
Flavobacteriaceae bacterium 3519-10 2
Polaribacter sp. MED152 2
Flavobacterium branchiophilum FL-15 0
Flavobacterium johnsoniae UW101 9
Waddlia chondrophila WSU 86-1044 4
Candidatus Protochlamydia amoebophila UWE25 2
Parachlamydia acanthamoebae UV-7 9
Simkania negevensis Z 1
Phycisphaera mikurensis NBRC 102666 5
Isosphaera pallida ATCC 43644 8
Planctomyces brasiliensis DSM 5305 12
Planctomyces limnophilus DSM 3776 8
Rhodopirellula baltica SH 1 12
Pirellula staleyi DSM 6068 9
Methylacidiphilum infernorum V4 5
Coraliomargarita akajimensis DSM 45221 6
Opitutus terrae PB90-1 8
Akkermansia muciniphila ATCC BAA-835 3
Fretibacterium fastidiosum 2
Thermovirga lienii DSM 17291 1
Aminobacterium colombiense DSM 12261 1
Anaerobaculum mobile DSM 13181 1
Turneriella parva DSM 21527 6
Leptospira borgpetersenii serovar Hardjo-bovis str. L550 4
Leptospira interrogans serovar Lai str. IPAV 6
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 9
Brachyspira murdochii DSM 12563 4
Brachyspira intermedia PWS/A 4
Brachyspira pilosicoli 95/1000 5
Brachyspira hyodysenteriae WA1 4
Spirochaeta smaragdinae DSM 11293 13
Sphaerochaeta pleomorpha str. Grapes 10
Sphaerochaeta globus str. Buddy 4
Sphaerochaeta coccoides DSM 17374 1
Spirochaeta caldaria DSM 7334 3
Treponema azotonutricium ZAS-9 9
Treponema primitia ZAS-2 2
Treponema brennaborense DSM 12168 2
Geobacillus sp. JF8 5
Treponema denticola ATCC 35405 1
Spirochaeta africana DSM 8902 1
Spirochaeta thermophila DSM 6192 1
Thermodesulfobacterium sp. OPB45 1
Desulfurispirillum indicum S5 2
Calditerrivibrio nitroreducens DSM 19672 2
Denitrovibrio acetiphilus DSM 12809 3
Deferribacter desulfuricans SSM1 3
Flexistipes sinusarabici DSM 4947 3
Marinitoga piezophila KA3 1
Petrotoga mobilis SJ95 1
Mesotoga prima MesG1.Ag.4.2 4
Kosmotoga olearia TBF 19.5.1 4
Fervidobacterium pennivorans DSM 9078 1
Fervidobacterium nodosum Rt17-B1 1
Thermosipho melanesiensis BI429 2
Thermosipho africanus TCF52B 2
Thermotoga lettingae TMO 5
Thermotoga thermarum DSM 5069 3
Thermotoga sp. RQ2 2
Thermotoga naphthophila RKU-10 3
Thermotoga petrophila RKU-1 3
Thermotoga neapolitana DSM 4359 3
Thermotoga maritima MSB8 3
Sulfurihydrogenibium sp. YO3AOP1 1
Sulfurihydrogenibium azorense Az-Fu1 1
Persephonella marina EX-H1 2
Hydrogenobaculum sp. Y04AAS1 1
Thermocrinis albus DSM 14484 1
Aquifex aeolicus VF5 1
Hydrogenobacter thermophilus TK-6 1
Elusimicrobium minutum Pei191 1
Dictyoglomus turgidum DSM 6724 5
Dictyoglomus thermophilum H-6-12 6
Caldisericum exile AZM16c01 2
Candidatus Chloracidobacterium thermophilum B 7
Candidatus Solibacter usitatus Ellin6076 22
Granulicella tundricola MP5ACTX9 15
Granulicella mallensis MP5ACTX8 15
Candidatus Koribacter versatilis Ellin345 13
Terriglobus saanensis SP1PR4 17
Terriglobus roseus DSM 18391 17
Acidobacterium capsulatum ATCC 51196 12
Thermodesulfovibrio yellowstonii DSM 11347 3
Candidatus Nitrospira defluvii 4
Leptospirillum ferrooxidans C2-3 6
Streptobacillus moniliformis DSM 12112 1
Sebaldella termitidis ATCC 33386 11
Leptotrichia buccalis C-1013-b 4
Ilyobacter polytropus DSM 2926 6
Candidatus Methylomirabilis oxyfera 5
Acidithiobacillus ferrivorans SS3 2
Acidithiobacillus ferrooxidans ATCC 53993 3
Bacteriovorax marinus SJ 3
Bdellovibrio bacteriovorus HD100 3
Arcobacter sp. L 2
Arcobacter nitrofigilis DSM 7299 3
Arcobacter butzleri RM4018 3
Campylobacter lari RM2100 1
Campylobacter jejuni subsp. doylei 269.97 1
Helicobacter cetorum MIT 00-7128 2
Helicobacter bizzozeronii CIII-1 1
Helicobacter hepaticus ATCC 51449 1
Helicobacter mustelae 12198 1
Helicobacter felis ATCC 49179 2
Helicobacter cinaedi PAGU611 1
Helicobacter acinonychis str. Sheeba 1
Helicobacter pylori B38 1
Desulfarculus baarsii DSM 2075 2
Desulfobacca acetoxidans DSM 11109 3
Syntrophus aciditrophicus SB 3
Desulfomonile tiedjei DSM 6799 11
Syntrophobacter fumaroxidans MPOB 6
Desulfurivibrio alkaliphilus AHT2 1
Desulfotalea psychrophila LSv54 1
Desulfobulbus propionicus DSM 2032 2
Desulfatibacillum alkenivorans AK-01 4
Desulfobacterium autotrophicum HRM2 4
Desulfococcus oleovorans Hxd3 1
Desulfohalobium retbaense DSM 5692 0
Desulfomicrobium baculatum DSM 4028 2
Desulfovibrio piezophilus 2
Desulfovibrio aespoeensis Aspo-2 1
Desulfovibrio magneticus RS-1 3
Desulfovibrio vulgaris subsp. vulgaris DP4 1
Desulfovibrio salexigens DSM 2638 2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 0
Desulfovibrio africanus str. Walvis Bay 3
Hippea maritima DSM 10411 1
Geobacter daltonii FRC-32 8
Geobacter sp. M21 8
Geobacter uraniireducens Rf4 5
Geobacter lovleyi SZ 3
Geobacter bemidjiensis Bem 9
Geobacter sulfurreducens KN400 3
Geobacter metallireducens GS-15 5
Pelobacter propionicus DSM 2379 4
Pelobacter carbinolicus DSM 2380 3
Babela massiliensis 1
Haliangium ochraceum DSM 14365 13
Sorangium cellulosum 'So ce 56' 27
Anaeromyxobacter sp. Fw109-5 18
Anaeromyxobacter dehalogenans 2CP-1 11
Stigmatella aurantiaca DW4/3-1 19
Corallococcus coralloides DSM 2259 30
Myxococcus xanthus DK 1622 21
Myxococcus fulvus HW-1 21
Dechloromonas aromatica RCB 6
Thauera sp. MZ1T 10
Azoarcus sp. KH32C 14
Pandoraea sp. RB-44 11
Azoarcus sp. BH72 6
Aromatoleum aromaticum EbN1 10
Dechlorosoma suillum PS 2
Pseudogulbenkiania sp. NH8B 8
Laribacter hongkongensis HLHK9 2
Chromobacterium violaceum ATCC 12472 7
Neisseria meningitidis alpha14 2
Neisseria meningitidis FAM18 2
Neisseria lactamica 020-06 3
Neisseria gonorrhoeae NCCP11945 3
Candidatus Accumulibacter phosphatis clade IIA str. UW-1 8
beta proteobacterium CB 4
Methylibium petroleiphilum PM1 14
Thiomonas arsenitoxydans 3
Thiomonas intermedia K12 5
Rubrivivax gelatinosus IL144 9
Leptothrix cholodnii SP-6 7
Burkholderia rhizoxinica HKI 454 6
Burkholderia phytofirmans PsJN 22
Burkholderia phymatum STM815 30
Burkholderia xenovorans LB400 32
Ralstonia eutropha JMP134 34
Cupriavidus taiwanensis LMG 19424 16
Cupriavidus metallidurans CH34 18
Cupriavidus necator N-1 35
Ralstonia eutropha H16 26
Ralstonia pickettii 12D 9
Ralstonia solanacearum CFBP2957 14
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 3
Burkholderia sp. RPE64 16
Burkholderia sp. CCGE1002 30
Burkholderia thailandensis E264 16
Burkholderia pseudomallei 1106a 19
Burkholderia mallei SAVP1 16
Burkholderia ambifaria AMMD 28
Burkholderia cenocepacia HI2424 29
Burkholderia multivorans ATCC 17616 25
Burkholderia vietnamiensis G4 19
Burkholderia gladioli BSR3 30
Burkholderia glumae BGR1 24
Verminephrobacter eiseniae EF01-2 12
Alicycliphilus denitrificans K601 13
Ramlibacter tataouinensis TTB310 11
Delftia sp. Cs1-4 16
Delftia acidovorans SPH-1 17
Polaromonas sp. JS666 15
Polaromonas naphthalenivorans CJ2 11
Variovorax paradoxus S110 20
Rhodoferax ferrireducens T118 9
Acidovorax ebreus TPSY 8
Acidovorax sp. KKS102 9
Acidovorax sp. JS42 8
Acidovorax citrulli AAC00-1 7
Acidovorax avenae subsp. avenae ATCC 19860 11
Comamonas testosteroni CNB-2 10
Herminiimonas arsenicoxydans 5
Collimonas fungivorans Ter331 9
Janthinobacterium sp. Marseille 7
Herbaspirillum seropedicae SmR1 10
Pusillimonas sp. T7-7 10
Advenella kashmirensis WT001 12
Taylorella asinigenitalis MCE3 2
Taylorella equigenitalis MCE9 2
Bordetella petrii DSM 12804 12
Bordetella avium 197N 3
Bordetella pertussis Tohama I 7
Bordetella parapertussis 12822 5
Bordetella bronchiseptica RB50 9
Achromobacter xylosoxidans A8 21
Achromobacter xylosoxidans 12
Nitrosospira multiformis ATCC 25196 7
Nitrosomonas sp. Is79A3 2
Nitrosomonas eutropha C91 1
Nitrosomonas europaea ATCC 19718 2
Sideroxydans lithotrophicus ES-1 2
Gallionella capsiferriformans ES-2 1
Methylotenera versatilis 301 2
Methylotenera mobilis JLW8 3
Methylovorus sp. MP688 3
Methylovorus glucosetrophus SIP3-4 2
Methylobacillus flagellatus KT 3
Magnetococcus marinus MC-1 2
Parvularcula bermudensis HTCC2503 5
Asticcacaulis excentricus CB 48 7
Brevundimonas subvibrioides ATCC 15264 10
Caulobacter sp. K31 19
Caulobacter crescentus NA1000 10
Caulobacter segnis ATCC 21756 13
Phenylobacterium zucineum HLK1 12
Erythrobacter litoralis HTCC2594 5
Sphingopyxis alaskensis RB2256 9
Novosphingobium sp. PP1Y 18
Novosphingobium aromaticivorans DSM 12444 21
Sphingobium sp. SYK-6 14
Sphingobium japonicum UT26S 14
Sphingobium chlorophenolicum L-1 17
Sphingomonas sp. MM-1 18
Sphingomonas wittichii RW1 16
Zymomonas mobilis subsp. mobilis NCIMB 11163 3
Maricaulis maris MCS10 6
Hirschia baltica ATCC 49814 7
Hyphomonas neptunium ATCC 15444 18
Dinoroseobacter shibae DFL 12 10
Phaeobacter gallaeciensis 2.10 10
Pseudovibrio sp. FO-BEG1 13
Jannaschia sp. CCS1 9
Ruegeria sp. TM1040 6
Ruegeria pomeroyi DSS-3 14
Ketogulonicigenium vulgare Y25 6
Ketogulonigenium vulgarum WSH-001 6
Roseobacter litoralis Och 149 14
Roseobacter denitrificans OCh 114 12
Rhodobacter sphaeroides ATCC 17029 13
Rhodobacter capsulatus SB 1003 5
Paracoccus denitrificans PD1222 15
Rhodospirillum photometricum DSM 122 4
Tistrella mobilis KA081020-065 21
Magnetospirillum magneticum AMB-1 7
Rhodospirillum centenum SW 8
Rhodospirillum rubrum F11 10
Azospirillum lipoferum 4B 11
Azospirillum sp. B510 16
Azospirillum brasilense Sp245 12
Gluconacetobacter xylinus NBRC 3288 9
Granulibacter bethesdensis CGDNIH1 6
Gluconacetobacter diazotrophicus PAl 5 12
Acidiphilium multivorum AIU301 12
Acidiphilium cryptum JF-5 11
Gluconobacter oxydans 621H 5
Acetobacter pasteurianus IFO 3283-01 6
Polymorphum gilvum SL003B-26A1 4
Micavibrio aeruginosavorus ARL-13 3
Candidatus Puniceispirillum marinum IMCC1322 3
alpha proteobacterium HIMB5 4
alpha proteobacterium HIMB59 4
Candidatus Pelagibacter sp. IMCC9063 2
Candidatus Midichloria mitochondrii IricVA 1
Neorickettsia sennetsu str. Miyayama 1
Neorickettsia risticii str. Illinois 1
Wolbachia endosymbiont of Culex quinquefasciatus Pel 1
Wolbachia sp. wRi 1
Ehrlichia chaffeensis str. Arkansas 1
Ehrlichia canis str. Jake 1
Ehrlichia ruminantium str. Gardel 1
Anaplasma phagocytophilum HZ 1
Anaplasma marginale str. Florida 1
Anaplasma centrale str. Israel 1
Orientia tsutsugamushi str. Boryong 0
Starkeya novella DSM 506 14
Xanthobacter autotrophicus Py2 18
Azorhizobium caulinodans ORS 571 15
Methylobacterium chloromethanicum CM4 17
Methylobacterium extorquens AM1 16
Methylobacterium sp. 4-46 15
Methylobacterium populi BJ001 13
Methylobacterium nodulans ORS 2060 22
Methylobacterium radiotolerans JCM 2831 17
Parvibaculum lavamentivorans DS-1 19
Ochrobactrum anthropi ATCC 49188 11
Brucella microti CCM 4915 6
Brucella pinnipedialis B2/94 6
Brucella canis ATCC 23365 6
Brucella suis ATCC 23445 6
Brucella melitensis ATCC 23457 5
Brucella ovis ATCC 25840 4
Brucella abortus S19 5
Sinorhizobium fredii NGR234 20
Sinorhizobium medicae WSM419 22
Sinorhizobium meliloti AK83 23
Genome sequence of Rhizobium sp. strain IRBG74 19
Rhizobium etli CIAT 652 24
Rhizobium leguminosarum bv. viciae 3841 29
Agrobacterium tumefaciens str. C58 23
Agrobacterium radiobacter K84 25
Agrobacterium sp. H13-3 21
Agrobacterium vitis S4 13
Candidatus Liberibacter asiaticus str. psy62 1
Mesorhizobium sp. BNC1 12
Mesorhizobium opportunistum WSM2075 26
Mesorhizobium ciceri biovar biserrulae WSM1271 23
Mesorhizobium loti MAFF303099 22
Methylocella silvestris BL2 11
Beijerinckia indica subsp. indica ATCC 9039 18
Pelagibacterium halotolerans B2 10
Rhodomicrobium vannielii ATCC 17100 10
Hyphomicrobium sp. MC1 10
Hyphomicrobium denitrificans ATCC 51888 8
Oligotropha carboxidovorans OM4 10
Rhodopseudomonas palustris BisA53 15
Nitrobacter winogradskyi Nb-255 2
Nitrobacter hamburgensis X14 7
Bradyrhizobium japonicum USDA 110 28
Bradyrhizobium sp. ORS 278 21
Methylocystis sp. SC2 4
Bartonella tribocorum CIP 105476 1
Bartonella clarridgeiae 73 1
Bartonella henselae str. Houston-1 1
Bartonella grahamii as4aup 1
Bartonella quintana str. Toulouse 1
Bartonella bacilliformis KC583 1
Saccharophagus degradans 2-40 5
Teredinibacter turnerae T7901 3
Cellvibrio japonicus Ueda107 1
Aggregatibacter actinomycetemcomitans D7S-1 2
Haemophilus somnus 129PT 2
Gallibacterium anatis UMN179 3
Haemophilus influenzae PittEE 0
Actinobacillus succinogenes 130Z 5
Actinobacillus pleuropneumoniae serovar 5b str. L20 1
Oceanimonas sp. GK1 4
Tolumonas auensis DSM 9187 3
Aeromonas veronii B565 5
Aeromonas salmonicida subsp. salmonicida A449 3
Aeromonas hydrophila subsp. hydrophila ATCC 7966 5
Aliivibrio salmonicida LFI1238 5
Vibrio fischeri MJ11 4
Vibrio sp. Ex25 6
Vibrio harveyi ATCC BAA-1116 4
Vibrio parahaemolyticus RIMD 2210633 6
Vibrio splendidus LGP32 6
Vibrio anguillarum 775 3
Vibrio furnissii NCTC 11218 5
Vibrio vulnificus MO6-24/O 5
Vibrio cholerae O395 3
Photobacterium profundum SS9 7
Psychromonas ingrahamii 37 5
Psychromonas sp. CNPT3 3
Idiomarina loihiensis L2TR 6
Ferrimonas balearica DSM 9799 5
Shewanella piezotolerans WP3 4
Shewanella loihica PV-4 5
Shewanella halifaxensis HAW-EB4 3
Shewanella sediminis HAW-EB3 6
Shewanella denitrificans OS217 3
Shewanella pealeana ATCC 700345 4
Shewanella oneidensis MR-1 4
Shewanella baltica OS185 5
Shewanella woodyi ATCC 51908 4
Shewanella sp. MR-4 5
Shewanella amazonensis SB2B 4
Shewanella violacea DSS12 4
Shewanella frigidimarina NCIMB 400 7
Shewanella putrefaciens CN-32 4
Colwellia psychrerythraea 34H 8
Pseudoalteromonas sp. SM9913 7
Pseudoalteromonas atlantica T6c 21
Pseudoalteromonas haloplanktis TAC125 8
Glaciecola sp. 4H-3-7+YE-5 20
Glaciecola nitratireducens FR1064 8
Marinobacter adhaerens HP15 10
Marinobacter sp. BSs20148 14
Marinobacter hydrocarbonoclasticus ATCC 49840 7
Marinobacter aquaeolei VT8 8
Alteromonas sp. SN2 10
Alteromonas macleodii str. 'Deep ecotype' 11
Kangiella koreensis DSM 16069 4
Hahella chejuensis KCTC 2396 9
Alcanivorax borkumensis SK2 6
Marinomonas posidonica IVIA-Po-181 6
Marinomonas sp. MWYL1 11
Marinomonas mediterranea MMB-1 10
Chromohalobacter salexigens DSM 3043 19
Halomonas elongata DSM 2581 11
Methylomicrobium alcaliphilum 3
Methylomonas methanica MC09 4
Methylococcus capsulatus str. Bath 3
Dichelobacter nodosus VCS1703A 1
Rhodanobacter denitrificans 7
Frateuria aurantia DSM 6220 9
Pseudoxanthomonas spadix BD-a59 10
Pseudoxanthomonas suwonensis 11-1 4
Stenotrophomonas maltophilia K279a 9
Xylella fastidiosa M23 3
Xanthomonas axonopodis pv. citri str. 306 12
Xanthomonas albilineans GPE PC73 6
Xanthomonas oryzae pv. oryzae PXO99A 7
Xanthomonas campestris pv. campestris str. B100 9
Halothiobacillus neapolitanus c2 2
Spiribacter sp. UAH-SP71 5
Alkalilimnicola ehrlichii MLHE-1 6
Thioalkalivibrio sulfidophilus HL-EbGr7 3
Thioalkalivibrio sp. K90mix 3
Halorhodospira halophila SL1 4
Allochromatium vinosum DSM 180 4
Thiocystis violascens DSM 198 3
Nitrosococcus watsonii C-113 3
Nitrosococcus halophilus Nc4 3
Nitrosococcus oceani ATCC 19707 5
Coxiella burnetii Dugway 5J108-111 2
Legionella longbeachae NSW150 7
Legionella pneumophila str. Corby 5
gamma proteobacterium HdN1 4
Photorhabdus asymbiotica 6
Photorhabdus luminescens subsp. laumondii TTO1 6
Xenorhabdus bovienii SS-2004 5
Xenorhabdus nematophila ATCC 19061 6
Providencia stuartii MRSN 2154 6
Proteus mirabilis HI4320 4
Edwardsiella ictaluri 93-146 3
Edwardsiella tarda EIB202 3
Rahnella sp. Y9602 14
Rahnella aquatilis CIP 78.65 = ATCC 33071 21
Yersinia pseudotuberculosis IP 31758 5
Yersinia pestis Pestoides F 5
Yersinia enterocolitica subsp. enterocolitica 8081 7
Serratia sp. AS12 19
Serratia sp. ATCC 39006 11
Serratia plymuthica AS9 19
Serratia proteamaculans 568 20
Dickeya dadantii Ech703 7
Dickeya zeae Ech1591 10
Pectobacterium wasabiae WPP163 11
Pectobacterium sp. SCC3193 11
Pectobacterium atrosepticum SCRI1043 11
Pectobacterium carotovorum subsp. carotovorum PC1 13
Sodalis glossinidius str. 'morsitans' 1
Pantoea sp. At-9b 23
Pantoea vagans C9-1 18
Pantoea ananatis LMG 20103 13
Erwinia tasmaniensis Et1/99 11
Erwinia sp. Ejp617 9
Erwinia billingiae Eb661 17
Erwinia pyrifoliae Ep1/96 9
Erwinia amylovora ATCC 49946 10
Escherichia blattae DSM 4481 7
Cronobacter turicensis z3032 13
Cronobacter sakazakii ES15 11
Enterobacteriaceae bacterium strain FGI 57 9
Shigella sonnei Ss046 14
Shigella flexneri 5 str. 8401 10
Shigella dysenteriae Sd197 9
Shigella boydii CDC 3083-94 7
Salmonella bongori NCTC 12419 15
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 12
Klebsiella oxytoca E718 19
Klebsiella variicola At-22 20
Klebsiella pneumoniae NTUH-K2044 14
Enterobacter aerogenes KCTC 2190 13
Escherichia fergusonii ATCC 35469 9
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 15
Enterobacter sp. R4-368 13
Enterobacter sp. 638 10
Enterobacter asburiae LF7a 12
Enterobacter cloacae subsp. dissolvens SDM 10
Citrobacter rodentium ICC168 11
Citrobacter koseri ATCC BAA-895 8
Azotobacter vinelandii DJ 16
Pseudomonas sp. TKP 23
Pseudomonas sp. UW4 15
Pseudomonas brassicacearum subsp. brassicacearum NFM421 20
Pseudomonas entomophila L48 10
Pseudomonas syringae pv. tomato str. DC3000 16
Pseudomonas stutzeri A1501 12
Pseudomonas fulva 12-X 12
Pseudomonas putida F1 16
Pseudomonas protegens Pf-5 22
Pseudomonas fluorescens SBW25 18
Pseudomonas mendocina ymp 13
Pseudomonas aeruginosa UCBPP-PA14 19
Pseudomonas sp. VLB120 16
Psychrobacter sp. G 7
Psychrobacter sp. PRwf-1 5
Psychrobacter arcticus 273-4 4
Psychrobacter cryohalolentis K5 8
Moraxella catarrhalis RH4 0
Acinetobacter oleivorans DR1 10
Acinetobacter calcoaceticus PHEA-2 9
Acinetobacter baumannii ATCC 17978 7
Acinetobacter sp. ADP1 8
Methylophaga sp. JAM1 2
Cycloclasticus sp. P1 4
Francisella noatunensis subsp. orientalis str. Toba 04 1
Francisella sp. TX077308 1
Francisella philomiragia subsp. philomiragia ATCC 25017 1
Francisella tularensis subsp. tularensis WY96-3418 1
Francisella cf. novicida 3523 2
Francisella novicida U112 2
Candidatus Caldiarchaeum subterraneum 4
Cenarchaeum symbiosum A 4
Candidatus Nitrosopumilus sp. AR2 6
Nitrosopumilus maritimus SCM1 6
Candidatus Korarchaeum cryptofilum OPF8 2
Acidilobus saccharovorans 345-15 3
Pyrolobus fumarii 1A 2
Hyperthermus butylicus DSM 5456 1
Thermogladius cellulolyticus 1633 1
Ignisphaera aggregans DSM 17230 2
Aeropyrum pernix K1 3
Ignicoccus hospitalis KIN4/I 0
Thermosphaera aggregans DSM 11486 2
Staphylothermus hellenicus DSM 12710 2
Staphylothermus marinus F1 2
Desulfurococcus fermentans DSM 16532 2
Desulfurococcus kamchatkensis 1221n 2
Desulfurococcus mucosus DSM 2162 2
Metallosphaera cuprina Ar-4 7
Metallosphaera sedula DSM 5348 8
Acidianus hospitalis W1 6
Sulfolobus tokodaii str. 7 11
Sulfolobus islandicus Y.N.15.51 17
Sulfolobus solfataricus P2 15
Sulfolobus acidocaldarius DSM 639 10
Thermofilum sp. 1910b 5
Thermofilum pendens Hrk 5 2
Vulcanisaeta moutnovskia 768-28 7
Vulcanisaeta distributa DSM 14429 9
Caldivirga maquilingensis IC-167 10
Pyrobaculum sp. 1860 6
Pyrobaculum calidifontis JCM 11548 4
Pyrobaculum arsenaticum DSM 13514 5
Pyrobaculum oguniense TE7 5
Thermoproteus neutrophilus V24Sta 3
Pyrobaculum aerophilum str. IM2 5
Pyrobaculum islandicum DSM 4184 4
Thermoproteus uzoniensis 768-20 9
Thermoproteus tenax Kra 1 4
halophilic archaeon DL31 7
Methanocella arvoryzae MRE50 4
Methanocella paludicola SANAE 1
Methanosaeta harundinacea 6Ac 1
Methanosaeta thermophila PT 1
Methanosaeta concilii GP6 1
Methanosarcina acetivorans C2A 5
Methanosarcina mazei Go1 0
Methanosarcina barkeri str. Fusaro 3
Methanosphaerula palustris E1-9c 3
Methanocorpusculum labreanum Z 1
Methanoculleus bourgensis MS2 0
Methanoculleus marisnigri JR1 0
Archaeoglobus fulgidus DSM 4304 1
Thermococcus sp. 4557 1
Thermococcus onnurineus NA1 1
Thermococcus kodakarensis KOD1 1
Thermococcus gammatolerans EJ3 2
Thermococcus sibiricus MM 739 1
Thermococcus barophilus MP 4
Pyrococcus sp. ST04 2
Pyrococcus yayanosii CH1 2
Pyrococcus horikoshii OT3 1
Pyrococcus abyssi GE5 1
Pyrococcus furiosus COM1 1
Thermoplasma volcanium GSS1 4
Thermoplasma acidophilum DSM 1728 4
Picrophilus torridus DSM 9790 6
Salinarchaeum sp. Harcht-Bsk1 10
Halopiger xanaduensis SH-6 12
Haloterrigena turkmenica DSM 5511 21
Natrinema sp. J7-2 9
Natrialba magadii ATCC 43099 8
Halorubrum lacusprofundi ATCC 49239 10
Haloquadratum walsbyi DSM 16790 9
Halogeometricum borinquense DSM 11551 10
Haloferax mediterranei ATCC 33500 13
Haloferax volcanii DS2 12
Halomicrobium mukohataei DSM 12286 3
Halorhabdus utahensis DSM 12940 4
Natronomonas pharaonis DSM 2160 4
Haloarcula hispanica ATCC 33960 11
Haloarcula marismortui ATCC 43049 13
Halalkalicoccus jeotgali B3 17
Halobacterium salinarum R1 5
Halobacterium sp. NRC-1 5
Methanosphaera stadtmanae DSM 3091 1
Methanobrevibacter sp. AbM4 1
Methanobrevibacter ruminantium M1 4
Methanobrevibacter smithii ATCC 35061 2
Aciduliprofundum sp. MAR08-339 1
Aciduliprofundum boonei T469 1
Genome Number
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) 22
Drosophila melanogaster FlyBase 5.12 6
Anopheles gambiae VectorBase AgamP3.6 8
Ascaris suum Victoria/Ghent 6
Caenorhabditis elegans WormBase WS218 10
Cryptococcus neoformans var. grubii H99 23
Cryptococcus neoformans B-3501A 19
Cryptococcus neoformans JEC21 22
Paracoccidioides brasiliensis Pb01 18
Paracoccidioides brasiliensis Pb03 19
Coccidioides posadasii str. Silveira 23
Coccidioides immitis RMSCC 3703 22
Coccidioides immitis RMSCC 2394 23
Coccidioides immitis H538.4 21
Ajellomyces dermatitidis ER-3 28
Histoplasma capsulatum H143 19
Histoplasma capsulatum H88 21
Histoplasma capsulatum G186AR 23
Aspergillus fumigatus A1163 46
Candida albicans WO-1 19
Saccharomyces cerevisiae UC5 14
Saccharomyces cerevisiae PW5 18
Saccharomyces cerevisiae FL100 11
Saccharomyces cerevisiae CLIB382 2
Saccharomyces cerevisiae CLIB324 10
Saccharomyces cerevisiae CBS7960 12
Saccharomyces cerevisiae YJM269 14
Saccharomyces cerevisiae T7 17
Saccharomyces cerevisiae FostersB 14
Saccharomyces cerevisiae FostersO 12
Saccharomyces cerevisiae VL3 17
Saccharomyces cerevisiae Vin13 13
Saccharomyces cerevisiae LalvinQA23 17
Saccharomyces cerevisiae AWRI796 14
Saccharomyces cerevisiae Sigma1278b 20
Saccharomyces cerevisiae W303 19
Saccharomyces cerevisiae JAY291 13
Saccharomyces cerevisiae AWRI1631 13
Saccharomyces cerevisiae YPS163 9
Saccharomyces cerevisiae M22 8
Saccharomyces cerevisiae T73 8
Saccharomyces cerevisiae CLIB215 9
Saccharomyces cerevisiae Y10 4
Saccharomyces cerevisiae YJM789 20
Saccharomyces cerevisiae YJM789 17
Saccharomyces cerevisiae RM11-1a 20
Saccharomyces cerevisiae RM11-1a 19
Saccharomyces cerevisiae SGD 20
Schizosaccharomyces pombe 972h- 9
Batrachochytrium dendrobatidis JEL423 4
Batrachochytrium dendrobatidis JAM81 7
Theobroma cacao Matina 1-6 v0.9 28
Hordeum vulgare 22 37
Oryza sativa ssp. Indica 33
Trypanosoma brucei Lister 427 v4.1 3
Neospora caninum Nc-Liverpool 6.2 1
Genome Number
Chroococcidiopsis thermalis PCC 7203 14
Chamaesiphon minutus PCC 6605 10
Synechocystis sp. PCC 6803 substr. PCC-P 1
Synechocystis sp. PCC 6803 substr. PCC-N 1
Synechocystis sp. PCC 6803 substr. GT-I 1
Synechocystis sp. PCC 6803 1
Cyanobium gracile PCC 6307 4
Dactylococcopsis salina PCC 8305 2
Synechococcus sp. JA-2-3B'a(2-13) 1
Synechococcus sp. JA-3-3Ab 1
Synechococcus sp. WH 7803 1
Synechococcus sp. PCC 7002 1
Synechococcus elongatus PCC 6301 1
Prochlorococcus marinus str. AS9601 1
Prochlorococcus marinus subsp. pastoris str. CCMP1986 1
Crinalium epipsammum PCC 9333 7
Oscillatoria nigro-viridis PCC 7112 8
Oscillatoria acuminata PCC 6304 5
Arthrospira platensis NIES-39 3
Cyanothece sp. PCC 7822 9
Cyanothece sp. PCC 7425 11
Cyanothece sp. PCC 7424 5
Cyanothece sp. ATCC 51142 5
Cyanothece sp. PCC 8801 3
Cyanobacterium aponinum PCC 10605 3
Cyanobacterium stanieri PCC 7202 0
Gloeobacter kilaueensis Gloeobacter sp. JS 13
Pleurocapsa minor Pleurocapsa sp. PCC 7327 5
Stanieria cyanosphaera PCC 7437 3
Calothrix parietina Calothrix sp. PCC 6303 6
Cylindrospermum stagnale PCC 7417 12
Anabaena cylindrica PCC 7122 7
Spiroplasma syrphidicola EA-1 1
Spiroplasma chrysopicola DF-1 1
Spiroplasma taiwanense CT-1 1
Mycoplasma bovis Hubei-1 3
Mycoplasma bovis PG45 3
Mycoplasma fermentans JER 1
Mycoplasma fermentans PG18 1
Mycoplasma agalactiae 3
Mycoplasma pneumoniae M129 1
Gordonibacter pamelaeae 7-10-1-b 1
Frankia sp. EuI1c 40
Frankia sp. CcI3 12
Nocardiopsis alba ATCC BAA-2165 25
Streptomyces albus J1074 26
Streptomyces rapamycinicus NRRL 5491 73
Streptomyces davawensis JCM 4913 38
Streptomyces fulvissimus DSM 40593 20
Streptomyces venezuelae ATCC 10712 21
Streptomyces collinus Tu 365 31
Streptomyces cattleya NRRL 8057 = DSM 46488 32
Streptomyces hygroscopicus subsp. jinggangensis TL01 58
Saccharothrix espanaensis DSM 44229 30
Amycolatopsis mediterranei RB 61
Amycolatopsis mediterranei S699 61
Amycolatopsis mediterranei S699 61
Amycolatopsis orientalis HCCB10007 33
Propionibacterium avidum 44067 6
Propionibacterium acnes ATCC 11828 8
Propionibacterium acnes TypeIA2 P.acn31 9
Propionibacterium acnes TypeIA2 P.acn17 9
Propionibacterium acnes TypeIA2 P.acn33 8
Propionibacterium acnes C1 8
Propionibacterium acnes HL096PA1 9
Propionibacterium acnes 6609 9
Propionibacterium acnes 266 9
Propionibacterium acnes KPA171202 9
Propionibacterium acidipropionici ATCC 4875 21
Actinoplanes friuliensis DSM 7358 50
Rhodococcus pyridinivorans SB3094 16
Rhodococcus erythropolis CCM2595 24
Nocardia brasiliensis ATCC 700358 38
Mycobacterium sp. MOTT36Y 26
Mycobacterium sp. JDM601 16
Mycobacterium abscessus subsp. bolletii 50594 17
Mycobacterium liflandii 128FXT 23
Mycobacterium sp. KMS 31
Mycobacterium sp. MCS 30
Mycobacterium yongonense 05-1390 28
Mycobacterium intracellulare MOTT-64 26
Mycobacterium indicus pranii MTCC 9506 27
Mycobacterium intracellulare MOTT-02 23
Mycobacterium avium subsp. paratuberculosis MAP4 15
Mycobacterium avium subsp. paratuberculosis K-10 15
Mycobacterium canettii CIPT 140070017 10
Mycobacterium canettii CIPT 140060008 10
Mycobacterium canettii CIPT 140070008 10
Mycobacterium canettii CIPT 140070010 10
Mycobacterium tuberculosis EAI5/NITR206 10
Mycobacterium tuberculosis EAI5 8
Mycobacterium tuberculosis CAS/NITR204 5
Mycobacterium tuberculosis str. Beijing/NITR203 10
Mycobacterium tuberculosis UT205 10
Mycobacterium tuberculosis RGTB423 7
Mycobacterium tuberculosis RGTB327 8
Mycobacterium tuberculosis CTRI-2 10
Mycobacterium tuberculosis str. Erdman = ATCC 35801 10
Mycobacterium tuberculosis KZN 605 10
Mycobacterium tuberculosis KZN 4207 10
Mycobacterium tuberculosis CCDC5180 9
Mycobacterium tuberculosis CCDC5079 10
Mycobacterium tuberculosis CCDC5079 10
Mycobacterium tuberculosis H37Ra 10
Mycobacterium tuberculosis str. Haarlem/NITR202 7
Mycobacterium tuberculosis str. Haarlem 10
Mycobacterium tuberculosis F11 10
Mycobacterium tuberculosis H37Rv 10
Mycobacterium tuberculosis CDC1551 10
Mycobacterium bovis AF2122/97 9
Mycobacterium bovis BCG str. Korea 1168P 9
Mycobacterium bovis BCG str. Mexico 9
Mycobacterium bovis BCG str. Tokyo 172 9
Mycobacterium gilvum Spyr1 25
Mycobacterium smegmatis str. MC2 155 50
Mycobacterium leprae TN 3
Mycobacterium kansasii ATCC 12478 24
Corynebacterium maris DSM 45190 10
Mycobacterium smegmatis JS623 35
Corynebacterium halotolerans YIM 70093 = DSM 44683 15
Corynebacterium terpenotabidum Y-11 11
Corynebacterium ulcerans BR-AD22 4
Corynebacterium ulcerans 809 4
Corynebacterium urealyticum DSM 7111 3
Corynebacterium argentoratense DSM 44202 2
Corynebacterium callunae DSM 20147 12
Corynebacterium pseudotuberculosis 258 5
Corynebacterium pseudotuberculosis Cp162 3
Corynebacterium pseudotuberculosis P54B96 5
Corynebacterium pseudotuberculosis 267 5
Corynebacterium pseudotuberculosis 1/06-A 5
Corynebacterium pseudotuberculosis 42/02-A 4
Corynebacterium pseudotuberculosis 3/99-5 5
Corynebacterium pseudotuberculosis 31 5
Corynebacterium pseudotuberculosis CIP 52.97 5
Corynebacterium pseudotuberculosis PAT10 5
Corynebacterium pseudotuberculosis I19 4
Corynebacterium pseudotuberculosis FRC41 4
Corynebacterium pseudotuberculosis C231 4
Corynebacterium pseudotuberculosis 1002 5
Corynebacterium glutamicum MB001 9
Corynebacterium glutamicum SCgG2 13
Corynebacterium glutamicum SCgG1 13
Corynebacterium glutamicum ATCC 13032 9
Corynebacterium glutamicum ATCC 13032 9
Corynebacterium glutamicum ATCC 13032 9
Corynebacterium diphtheriae BH8 5
Corynebacterium diphtheriae INCA 402 5
Corynebacterium diphtheriae VA01 5
Corynebacterium diphtheriae HC04 5
Corynebacterium diphtheriae HC03 5
Corynebacterium diphtheriae HC02 5
Corynebacterium diphtheriae HC01 5
Corynebacterium diphtheriae 241 5
Corynebacterium diphtheriae CDCE 8392 4
Corynebacterium diphtheriae PW8 5
Corynebacterium diphtheriae C7 (beta) 5
Corynebacterium diphtheriae 31A 6
Tropheryma whipplei str. Twist 1
Leifsonia xyli subsp. cynodontis DSM 46306 3
Clavibacter michiganensis subsp. sepedonicus 11
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 11
Gardnerella vaginalis HMP9231 1
Gardnerella vaginalis ATCC 14019 1
Bifidobacterium longum NCC2705 2
Bifidobacterium longum DJO10A 4
Bifidobacterium longum subsp. infantis 157F 2
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 2
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 2
Bifidobacterium longum subsp. longum KACC 91563 4
Bifidobacterium longum subsp. longum BBMN68 2
Bifidobacterium longum subsp. longum F8 2
Bifidobacterium longum subsp. longum JCM 1217 3
Bifidobacterium thermophilum RBL67 2
Bifidobacterium animalis subsp. animalis ATCC 25527 3
Bifidobacterium animalis subsp. lactis Bl12 1
Bifidobacterium animalis subsp. lactis B420 1
Bifidobacterium animalis subsp. lactis ATCC 27673 1
Bifidobacterium animalis subsp. lactis BLC1 1
Bifidobacterium animalis subsp. lactis CNCM I-2494 1
Bifidobacterium animalis subsp. lactis Bi-07 1
Bifidobacterium animalis subsp. lactis V9 1
Bifidobacterium animalis subsp. lactis DSM 10140 1
Bifidobacterium animalis subsp. lactis BB-12 1
Bifidobacterium animalis subsp. lactis AD011 1
Bifidobacterium breve UCC2003 2
Bifidobacterium asteroides PRL2011 3
Bifidobacterium bifidum PRL2010 2
Bifidobacterium bifidum BGN4 2
Actinomyces graevenitzii C83 3
Actinomyces odontolyticus ATCC 17982 5
Actinomyces viscosus C505 4
Dehalococcoides mccartyi GY50 1
Dehalococcoides mccartyi DCMB5 1
Dehalococcoides mccartyi BTF08 1
Dehalococcoides sp. GT 1
Dehalococcoides sp. VS 1
Dehalococcoides sp. CBDB1 1
Chthonomonas calidirosea T49 14
Deinococcus peraridilitoris DSM 19664 12
Thermus oshimai JL-2 8
Thermus thermophilus JL-18 9
Thermus thermophilus SG0.5JP17-16 8
Thermus thermophilus HB8 8
[Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 0
Erysipelothrix rhusiopathiae SY1027 1
Clostridium thermocellum DSM 1313 2
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 2
Faecalibacterium prausnitzii L2-6 1
Ruminococcus champanellensis 18P13 1
Sulfobacillus acidophilus TPY 7
Clostridium acidurici 9a 2
Desulfosporosinus meridiei DSM 13257 3
Desulfitobacterium dichloroeliminans LMG P-21439 2
Desulfitobacterium hafniense DCB-2 1
Desulfotomaculum gibsoniae DSM 7213 3
Clostridium difficile BI1 5
Clostridium difficile R20291 5
Clostridium difficile CD196 5
Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 2
Coprococcus catus GD/7 2
Clostridium sp. SY8519 6
Clostridium saccharobutylicum DSM 13864 2
Clostridium autoethanogenum DSM 10061 6
Clostridium saccharoperbutylacetonicum N1-4(HMT) 5
Clostridium kluyveri NBRC 12016 1
Clostridium pasteurianum BC1 5
Clostridium botulinum H04402 065 3
Clostridium botulinum BKT015925 1
Clostridium botulinum F str. 230613 4
Clostridium botulinum F str. Langeland 4
Clostridium botulinum E3 str. Alaska E43 3
Clostridium botulinum B1 str. Okra 4
Clostridium botulinum Ba4 str. 657 3
Clostridium botulinum A2 str. Kyoto 3
Clostridium botulinum A3 str. Loch Maree 3
Clostridium botulinum A str. Hall 2
Clostridium botulinum A str. ATCC 19397 3
Clostridium acetobutylicum DSM 1731 1
Clostridium acetobutylicum EA 2018 1
Thermoanaerobacterium saccharolyticum JW/SL-YS485 1
Thermoanaerobacterium thermosaccharolyticum M0795 1
Thermacetogenium phaeum DSM 12270 1
Thermoanaerobacter sp. X513 3
Carnobacterium maltaromaticum LMA28 6
Melissococcus plutonius ATCC 35311 3
Enterococcus mundtii QU 25 6
Enterococcus casseliflavus EC20 10
Enterococcus faecium Aus0085 6
Enterococcus faecium NRRL B-2354 5
Enterococcus faecium DO 6
Enterococcus faecalis str. Symbioflor 1 3
Enterococcus faecalis D32 3
Enterococcus faecalis OG1RF 4
Enterococcus faecalis V583 4
Leuconostoc carnosum JB16 5
Leuconostoc mesenteroides subsp. mesenteroides J18 6
Leuconostoc gelidum JB7 10
Lactobacillus paracasei subsp. paracasei 8700:2 9
Lactobacillus casei LOCK919 10
Lactobacillus casei W56 12
Lactobacillus casei LC2W 13
Lactobacillus casei BD-II 12
Lactobacillus casei BL23 13
Lactobacillus casei str. Zhang 11
Lactobacillus rhamnosus LOCK908 8
Lactobacillus rhamnosus LOCK900 7
Lactobacillus rhamnosus ATCC 8530 8
Lactobacillus rhamnosus GG 7
Lactobacillus rhamnosus GG 7
Lactobacillus johnsonii N6.2 1
Lactobacillus johnsonii NCC 533 2
Lactobacillus salivarius UCC118 4
Lactobacillus fermentum F-6 9
Lactobacillus fermentum CECT 5716 7
Lactobacillus amylovorus GRL 1112 1
Lactobacillus reuteri TD1 4
Lactobacillus reuteri I5007 5
Lactobacillus reuteri JCM 1112 6
Lactobacillus reuteri SD2112 3
Lactobacillus plantarum 16 16
Lactobacillus plantarum ZJ316 16
Lactobacillus plantarum subsp. plantarum ST-III 13
Lactobacillus plantarum subsp. plantarum P-8 14
Lactobacillus plantarum WCFS1 17
Lactobacillus helveticus H10 1
Lactobacillus delbrueckii subsp. bulgaricus ND02 3
Lactobacillus brevis KB290 10
Pediococcus pentosaceus SL4 5
Lactococcus garvieae Lg2 4
Lactococcus lactis subsp. lactis KLDS 4.0325 6
Lactococcus lactis subsp. lactis IO-1 5
Lactococcus lactis subsp. lactis CV56 4
Lactococcus lactis subsp. lactis KF147 5
Lactococcus lactis subsp. lactis Il1403 4
Lactococcus lactis subsp. cremoris KW2 4
Lactococcus lactis subsp. cremoris UC509.9 4
Lactococcus lactis subsp. cremoris A76 4
Lactococcus lactis subsp. cremoris NZ9000 5
Lactococcus lactis subsp. cremoris SK11 4
Streptococcus constellatus subsp. pharyngis C1050 2
Streptococcus constellatus subsp. pharyngis C818 2
Streptococcus constellatus subsp. pharyngis C232 2
Streptococcus intermedius B196 2
Streptococcus intermedius C270 2
Streptococcus anginosus C238 3
Streptococcus anginosus C1051 1
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 4
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 4
Streptococcus equi subsp. zooepidemicus ATCC 35246 2
Streptococcus equi subsp. zooepidemicus MGCS10565 2
Streptococcus equi subsp. zooepidemicus 2
Streptococcus dysgalactiae subsp. equisimilis 167 1
Streptococcus dysgalactiae subsp. equisimilis AC-2713 1
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 1
Streptococcus dysgalactiae subsp. equisimilis RE378 1
Streptococcus oligofermentans AS 1.3089 1
Streptococcus iniae SF1 1
Streptococcus parasanguinis FW213 5
Streptococcus pyogenes HSC5 1
Streptococcus pyogenes A20 2
Streptococcus pyogenes MGAS1882 2
Streptococcus pyogenes MGAS15252 2
Streptococcus pyogenes Alab49 2
Streptococcus pyogenes MGAS10750 2
Streptococcus pyogenes MGAS10270 2
Streptococcus pyogenes MGAS2096 1
Streptococcus pyogenes MGAS9429 2
Streptococcus pyogenes MGAS6180 2
Clostridium botulinum B str. Eklund 17B 3
Streptococcus pyogenes NZ131 2
Streptococcus pyogenes MGAS8232 2
Streptococcus pyogenes MGAS10394 2
Streptococcus pyogenes MGAS315 2
Streptococcus pyogenes SSI-1 2
Streptococcus pyogenes M1 476 2
Streptococcus pyogenes MGAS5005 2
Streptococcus pyogenes M1 GAS 2
Streptococcus pneumoniae A026 5
Streptococcus pneumoniae ST556 5
Streptococcus pneumoniae SPNA45 3
Streptococcus pneumoniae SPN994039 4
Streptococcus pneumoniae SPN994038 4
Streptococcus pneumoniae SPN034183 4
Streptococcus pneumoniae SPN034156 4
Streptococcus pneumoniae INV104 4
Streptococcus pneumoniae INV200 4
Streptococcus pneumoniae OXC141 4
Streptococcus pneumoniae gamPNI0373 4
Streptococcus pneumoniae AP200 4
Streptococcus pneumoniae ATCC 700669 4
Streptococcus pneumoniae TCH8431/19A 5
Streptococcus pneumoniae CGSP14 4
Streptococcus pneumoniae G54 3
Streptococcus pneumoniae JJA 4
Streptococcus pneumoniae 70585 4
Streptococcus pneumoniae Hungary19A-6 4
Streptococcus pneumoniae Taiwan19F-14 5
Streptococcus pneumoniae D39 4
Streptococcus pneumoniae 670-6B 5
Streptococcus pneumoniae R6 4
Streptococcus pneumoniae TIGR4 4
Streptococcus agalactiae ILRI112 3
Streptococcus agalactiae ILRI005 2
Streptococcus agalactiae 09mas018883 3
Streptococcus agalactiae 2-22 2
Streptococcus agalactiae SA20-06 3
Streptococcus agalactiae GD201008-001 2
Streptococcus agalactiae NEM316 2
Streptococcus agalactiae 2603V/R 3
Streptococcus mutans GS-5 4
Streptococcus mutans LJ23 5
Streptococcus mutans UA159 4
Streptococcus thermophilus MN-ZLW-002 1
Streptococcus thermophilus JIM 8232 2
Streptococcus thermophilus ND03 1
Streptococcus thermophilus CNRZ1066 1
Streptococcus thermophilus LMG 18311 1
Streptococcus suis T15 3
Streptococcus suis TL13 3
Streptococcus suis SC070731 3
Streptococcus suis S735 3
Streptococcus suis ST3 3
Streptococcus suis D9 3
Streptococcus suis SS12 3
Streptococcus suis D12 3
Streptococcus suis ST1 3
Streptococcus suis A7 3
Streptococcus suis JS14 3
Streptococcus suis BM407 3
Streptococcus suis SC84 3
Streptococcus suis GZ1 3
Streptococcus suis 98HAH33 3
Streptococcus suis 05ZYH33 3
Streptococcus salivarius CCHSS3 1
Streptococcus salivarius JIM8777 3
Exiguobacterium antarcticum B7 11
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 12
Thermobacillus composti KWC4 10
Paenibacillus sp. Y412MC10 18
Paenibacillus mucilaginosus KNP414 21
Paenibacillus mucilaginosus K02 21
Paenibacillus larvae subsp. larvae DSM 25430 2
Paenibacillus polymyxa CR1 14
Paenibacillus polymyxa SC2 8
Paenibacillus polymyxa E681 9
Listeria monocytogenes EGD sequence 8
Listeria monocytogenes N53-1 7
Listeria monocytogenes La111 6
Listeria monocytogenes serotype 4b str. LL195 8
Listeria monocytogenes 07PF0776 8
Listeria monocytogenes M7 8
Listeria monocytogenes J1-220 8
Listeria monocytogenes J1816 8
Listeria monocytogenes SLCC2376 8
Listeria monocytogenes SLCC5850 8
Listeria monocytogenes ATCC 19117 8
Listeria monocytogenes L312 8
Listeria monocytogenes SLCC2479 8
Listeria monocytogenes SLCC7179 8
Listeria monocytogenes SLCC2540 8
Listeria monocytogenes SLCC2378 8
Listeria monocytogenes serotype 1/2b str. SLCC2755 8
Listeria monocytogenes serotype 1/2c str. SLCC2372 8
Listeria monocytogenes serotype 7 str. SLCC2482 8
Listeria monocytogenes 08-5578 8
Listeria monocytogenes 08-5923 8
Listeria monocytogenes L99 8
Listeria monocytogenes HCC23 8
Listeria monocytogenes 10403S 8
Listeria monocytogenes J0161 8
Listeria monocytogenes Finland 1998 8
Listeria monocytogenes FSL R2-561 8
Listeria monocytogenes serotype 4b str. F2365 8
Listeria monocytogenes EGD-e 8
Geobacillus sp. C56-T3 4
Geobacillus sp. Y4.1MC1 9
Geobacillus sp. Y412MC52 1
Geobacillus sp. Y412MC61 1
Amphibacillus xylanus NBRC 15112 4
Bacillus amyloliquefaciens subsp. plantarum sequencing 12
Bacillus amyloliquefaciens subsp. plantarum UCMB5033 13
Bacillus amyloliquefaciens subsp. plantarum AS43.3 13
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 12
Bacillus amyloliquefaciens subsp. plantarum UCMB5113 13
Bacillus amyloliquefaciens subsp. plantarum UCMB5036 12
Bacillus amyloliquefaciens subsp. plantarum CAU B946 13
Bacillus amyloliquefaciens LFB112 12
Bacillus amyloliquefaciens CC178 14
Bacillus amyloliquefaciens Y2 12
Bacillus amyloliquefaciens IT-45 11
Bacillus amyloliquefaciens XH7 11
Bacillus amyloliquefaciens LL3 10
Bacillus amyloliquefaciens TA208 11
Bacillus amyloliquefaciens DSM 7 10
Bacillus licheniformis 9945A 7
Bacillus subtilis PY79 9
Bacillus subtilis XF-1 10
Bacillus subtilis QB928 8
Bacillus subtilis BSn5 9
Bacillus subtilis subsp. subtilis str. BAB-1 10
Bacillus subtilis subsp. subtilis str. BSP1 10
Bacillus subtilis subsp. subtilis str. RO-NN-1 9
Bacillus subtilis subsp. subtilis 6051-HGW 9
Bacillus subtilis subsp. spizizenii TU-B-10 12
Bacillus subtilis subsp. spizizenii str. W23 8
Bacillus subtilis subsp. natto BEST195 9
Bacillus licheniformis DSM 13 = ATCC 14580 7
Bacillus infantis NRRL B-14911 9
Bacillus cereus subsp. cytotoxis NVH 391-98 4
Bacillus toyonensis BCT-7112 11
Bacillus thuringiensis HD-771 11
Bacillus thuringiensis HD-789 11
Bacillus thuringiensis MC28 14
Bacillus thuringiensis serovar chinensis CT-43 13
Bacillus thuringiensis YBT-1518 14
Bacillus thuringiensis Bt407 13
Bacillus thuringiensis serovar konkukian str. 97-27 11
Bacillus thuringiensis serovar kurstaki str. HD73 11
Bacillus thuringiensis BMB171 12
Bacillus thuringiensis serovar finitimus YBT-020 11
Bacillus thuringiensis serovar thuringiensis str. IS5056 13
Bacillus cereus FRI-35 13
Bacillus cereus biovar anthracis str. CI 15
Bacillus cereus AH820 13
Bacillus cereus AH187 15
Bacillus cereus B4264 12
Bacillus cereus G9842 12
Bacillus cereus Q1 13
Bacillus cereus F837/76 11
Bacillus cereus NC7401 15
Bacillus cereus E33L 16
Bacillus cereus ATCC 14579 13
Bacillus cereus ATCC 10987 14
Bacillus anthracis str. H9401 14
Bacillus anthracis str. CDC 684 14
Bacillus anthracis str. 'Ames Ancestor' 13
Bacillus anthracis str. Sterne 14
Bacillus anthracis str. Ames 13
Bacillus megaterium WSH-002 10
Bacillus megaterium QM B1551 15
Bacillus coagulans 36D1 7
Staphylococcus aureus subsp. aureus MSHR1132 8
Staphylococcus pseudintermedius ED99 4
Staphylococcus pasteuri SP1 6
Staphylococcus lugdunensis N920143 7
Staphylococcus warneri SG1 6
Staphylococcus epidermidis ATCC 12228 8
Staphylococcus aureus CA-347 9
Staphylococcus aureus Bmb9393 8
Staphylococcus aureus M1 9
Staphylococcus aureus 08BA02176 8
Staphylococcus aureus ST228/18412 8
Staphylococcus aureus ST228/18341 8
Staphylococcus aureus ST228/16125 8
Staphylococcus aureus ST228/16035 8
Staphylococcus aureus ST228/15532 8
Staphylococcus aureus ST228/10497 8
Staphylococcus aureus ST228/10388 8
Staphylococcus aureus 04-02981 8
Staphylococcus aureus RF122 8
Staphylococcus aureus subsp. aureus Z172 8
Staphylococcus aureus subsp. aureus 6850 8
Staphylococcus aureus subsp. aureus SA957 8
Staphylococcus aureus subsp. aureus CN1 8
Staphylococcus aureus subsp. aureus SA40 8
Staphylococcus aureus subsp. aureus 11819-97 8
Staphylococcus aureus subsp. aureus M013 8
Staphylococcus aureus subsp. aureus HO 5096 0412 9
Staphylococcus aureus subsp. aureus VC40 8
Staphylococcus aureus subsp. aureus T0131 8
Staphylococcus aureus subsp. aureus LGA251 8
Staphylococcus aureus subsp. aureus ECT-R 2 9
Staphylococcus aureus subsp. aureus JKD6159 8
Staphylococcus aureus subsp. aureus ED133 8
Staphylococcus aureus subsp. aureus ED98 7
Staphylococcus aureus subsp. aureus TW20 8
Staphylococcus aureus subsp. aureus 55/2053 8
Staphylococcus aureus subsp. aureus TCH60 8
Staphylococcus aureus subsp. aureus str. JKD6008 8
Staphylococcus aureus subsp. aureus 71193 8
Staphylococcus aureus subsp. aureus S0385 8
Staphylococcus aureus subsp. aureus str. Newman 8
Staphylococcus aureus subsp. aureus Mu3 8
Staphylococcus aureus subsp. aureus USA300_TCH1516 8
Staphylococcus aureus subsp. aureus USA300_FPR3757 8
Staphylococcus aureus subsp. aureus JH9 9
Staphylococcus aureus subsp. aureus MSSA476 8
Staphylococcus aureus subsp. aureus MRSA252 8
Staphylococcus aureus subsp. aureus MW2 8
Staphylococcus aureus subsp. aureus N315 9
Staphylococcus aureus subsp. aureus Mu50 8
Staphylococcus aureus subsp. aureus COL 8
Staphylococcus aureus subsp. aureus NCTC 8325 8
Chlorobium phaeobacteroides BS1 4
Salinibacter ruber DSM 13855 6
Rhodothermus marinus SG0.5JP17-172 5
Echinicola vietnamensis DSM 17526 5
Emticicia oligotrophica DSM 17448 6
Porphyromonas gingivalis TDC60 1
Porphyromonas gingivalis W83 1
Bacteroides xylanisolvens XB1A 2
Bacteroides fragilis 638R 1
Bacteroides fragilis NCTC 9343 1
Nonlabens dokdonensis DSW-6 2
Psychroflexus torquis ATCC 700755 4
Singulisphaera acidiphila DSM 18658 14
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 4
Leptospira interrogans serovar Lai str. 56601 6
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 6
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 9
Brachyspira pilosicoli WesB 5
Brachyspira pilosicoli B2904 5
Helicobacter cinaedi ATCC BAA-847 1
Brachyspira pilosicoli P43/6/78 6
Treponema pedis str. T A4 1
Spirochaeta thermophila DSM 6578 1
Thermotoga maritima MSB8 3
Hydrogenobacter thermophilus TK-6 1
Leptospirillum ferriphilum ML-04 5
Fusobacterium nucleatum subsp. animalis 4_8 1
Acidithiobacillus ferrooxidans ATCC 23270 2
Bdellovibrio exovorus JSS 1
Bdellovibrio bacteriovorus str. Tiberius 5
Arcobacter butzleri 7h1h 3
Arcobacter butzleri ED-1 3
Campylobacter jejuni Waterborne C.jejuni Outbreak 1
Campylobacter jejuni RM1221 1
Campylobacter jejuni subsp. jejuni 00-2544 1
Campylobacter jejuni subsp. jejuni 00-2538 1
Campylobacter jejuni subsp. jejuni 00-2426 1
Campylobacter jejuni subsp. jejuni 00-2425 1
Campylobacter jejuni subsp. jejuni PT14 1
Campylobacter jejuni subsp. jejuni ICDCCJ07001 1
Campylobacter jejuni subsp. jejuni S3 1
Campylobacter jejuni subsp. jejuni M1 1
Campylobacter jejuni subsp. jejuni IA3902 1
Campylobacter jejuni subsp. jejuni 81116 1
Campylobacter jejuni subsp. jejuni 81-176 1
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 1
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 1
Campylobacter coli 76339 1
Campylobacter coli 15-537360 1
Campylobacter coli CVM N29710 1
Helicobacter cetorum MIT 99-5656 2
Helicobacter pylori BM012S 1
Helicobacter pylori BM012A 1
Helicobacter pylori SouthAfrica20 2
Helicobacter pylori UM298 1
Helicobacter pylori UM066 1
Helicobacter pylori UM037 1
Helicobacter pylori UM299 1
Helicobacter pylori UM032 1
Helicobacter pylori OK310 1
Helicobacter pylori OK113 1
Helicobacter pylori Rif2 1
Helicobacter pylori Rif1 1
Helicobacter pylori HUP-B14 1
Helicobacter pylori PeCan18 1
Helicobacter pylori Shi169 1
Helicobacter pylori Shi112 1
Helicobacter pylori Shi417 1
Helicobacter pylori Aklavik86 1
Helicobacter pylori Aklavik117 1
Helicobacter pylori SNT49 1
Helicobacter pylori Puno135 1
Helicobacter pylori Puno120 1
Helicobacter pylori ELS37 2
Helicobacter pylori Gambia94/24 2
Helicobacter pylori SouthAfrica7 2
Helicobacter pylori India7 1
Helicobacter pylori Lithuania75 1
Helicobacter pylori 2017 2
Helicobacter pylori 2018 2
Helicobacter pylori 908 2
Helicobacter pylori F57 1
Helicobacter pylori F30 1
Helicobacter pylori F16 1
Helicobacter pylori Sat464 1
Helicobacter pylori Cuz20 1
Helicobacter pylori PeCan4 1
Helicobacter pylori SJM180 1
Helicobacter pylori B8 1
Helicobacter pylori 52 1
Helicobacter pylori v225d 1
Helicobacter pylori 83 1
Helicobacter pylori 35A 1
Helicobacter pylori P12 1
Helicobacter pylori G27 1
Helicobacter pylori Shi470 1
Helicobacter pylori HPAG1 1
Helicobacter pylori 51 1
Helicobacter pylori F32 1
Helicobacter pylori J99 2
Helicobacter pylori 26695 1
Helicobacter pylori 26695 1
Desulfocapsa sulfexigens DSM 10523 0
Desulfobacula toluolica Tol2 5
Desulfovibrio hydrothermalis AM13 = DSM 14728 4
Desulfovibrio vulgaris RCH1 1
Desulfovibrio vulgaris str. 'Miyazaki F' 1
Desulfovibrio vulgaris str. Hildenborough 1
Desulfovibrio gigas DSM 1382 = ATCC 19364 2
Desulfovibrio desulfuricans ND132 2
Geobacter sp. M18 5
Geobacter sulfurreducens PCA 4
Sorangium cellulosum So0157-2 28
Anaeromyxobacter sp. K 16
Anaeromyxobacter dehalogenans 2CP-C 14
Myxococcus stipitatus DSM 14675 23
Neisseria meningitidis WUE 2594 2
Neisseria meningitidis G2136 2
Neisseria meningitidis M04-240196 2
Neisseria meningitidis M01-240149 2
Neisseria meningitidis NZ-05/33 2
Neisseria meningitidis M01-240355 2
Neisseria meningitidis 8013 2
Neisseria meningitidis 053442 3
Neisseria meningitidis Z2491 2
Neisseria meningitidis H44/76 3
Neisseria meningitidis alpha710 3
Neisseria meningitidis MC58 3
Neisseria gonorrhoeae TCDC-NG08107 3
Neisseria gonorrhoeae FA 1090 3
Candidatus Kinetoplastibacterium oncopeltii TCC290E 1
Candidatus Kinetoplastibacterium galatii TCC219 1
Candidatus Kinetoplastibacterium desouzaii TCC079E 2
Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis) 1
Kinetoplastibacterium blastocrithidii Candidatus TCC012E 1
Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 2
Candidatus Kinetoplastibacterium crithidii TCC036E 2
Burkholderia phenoliruptrix BR3459a 21
Pandoraea pnomenusa 3kgm 11
Ralstonia pickettii 12J 9
Ralstonia solanacearum FQY_4 12
Ralstonia solanacearum Po82 10
Ralstonia solanacearum PSI07 12
Ralstonia solanacearum CMR15 12
Ralstonia solanacearum GMI1000 14
Burkholderia sp. YI23 26
Burkholderia sp. CCGE1003 21
Burkholderia sp. CCGE1001 17
Burkholderia sp. KJ006 19
Burkholderia thailandensis MSMB121 18
Burkholderia pseudomallei MSHR305 22
Burkholderia pseudomallei NCTC 13179 22
Burkholderia pseudomallei BPC006 19
Burkholderia pseudomallei 1026b 22
Burkholderia pseudomallei MSHR346 6
Burkholderia pseudomallei 668 17
Burkholderia pseudomallei 1710b 18
Burkholderia pseudomallei K96243 22
Burkholderia mallei NCTC 10229 15
Burkholderia mallei NCTC 10247 17
Burkholderia mallei ATCC 23344 19
Burkholderia lata 32
Burkholderia ambifaria MC40-6 28
Burkholderia cenocepacia MC0-3 29
Burkholderia cenocepacia AU 1054 28
Burkholderia cenocepacia J2315 31
Burkholderia multivorans ATCC 17616 25
Burkholderia cepacia GG4 27
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 1
Alicycliphilus denitrificans BC 12
Variovorax paradoxus B4 25
Variovorax paradoxus EPS 18
Taylorella asinigenitalis 14/45 2
Taylorella equigenitalis 14/56 2
Taylorella equigenitalis ATCC 35865 2
Bordetella pertussis CS 7
Bordetella parapertussis 18323 6
Bordetella parapertussis Bpp5 7
Bordetella bronchiseptica MO149 9
Bordetella bronchiseptica 253 8
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 11
Nitrosomonas sp. AL212 3
Sulfuricella denitrificans skB26 2
Caulobacter crescentus CB15 10
Zymomonas mobilis subsp. mobilis ATCC 29191 4
Zymomonas mobilis subsp. mobilis CP4 3
Zymomonas mobilis subsp. mobilis ATCC 10988 4
Zymomonas mobilis subsp. mobilis ZM4 4
Zymomonas mobilis subsp. pomaceae ATCC 29192 4
Phaeobacter gallaeciensis DSM 17395 8
Phaeobacter gallaeciensis DSM 26640 11
Leisingera methylohalidivorans DSM 14336 7
Octadecabacter antarcticus 307 8
Octadecabacter arcticus 238 10
Rhodobacter sphaeroides KD131 15
Rhodobacter sphaeroides ATCC 17025 9
Rhodobacter sphaeroides 2.4.1 12
Paracoccus aminophilus JCM 7686 5
Candidatus Endolissoclinum faulkneri L2 0
Magnetospirillum gryphiswaldense MSR-1 v2 4
Rhodospirillum rubrum ATCC 11170 10
Gluconacetobacter diazotrophicus PAl 5 12
Gluconobacter oxydans H24 12
Acetobacter pasteurianus 386B 7
Acetobacter pasteurianus IFO 3283-12 6
Acetobacter pasteurianus IFO 3283-01-42C 6
Acetobacter pasteurianus IFO 3283-32 6
Acetobacter pasteurianus IFO 3283-26 6
Acetobacter pasteurianus IFO 3283-22 6
Acetobacter pasteurianus IFO 3283-07 6
Acetobacter pasteurianus IFO 3283-03 6
Micavibrio aeruginosavorus EPB 3
Candidatus Pelagibacter ubique HTCC1062 4
Wolbachia endosymbiont of Drosophila melanogaster 1
Wolbachia endosymbiont strain TRS of Brugia malayi 1
Wolbachia endosymbiont of Drosophila simulans wHa 1
Wolbachia endosymbiont of Drosophila simulans wNo 1
Ehrlichia muris AS145 1
Ehrlichia ruminantium str. Welgevonden 1
Ehrlichia ruminantium str. Welgevonden 1
Anaplasma phagocytophilum str. Dog2 1
Anaplasma phagocytophilum str. HZ2 1
Anaplasma phagocytophilum str. JM 1
Anaplasma marginale str. Dawn 1
Anaplasma marginale str. Gypsy Plains 1
Anaplasma marginale str. St. Maries 1
Orientia tsutsugamushi str. Ikeda 1
Methylobacterium extorquens DM4 18
Methylobacterium extorquens PA1 13
Brucella ceti TE10759-12 6
Brucella ceti TE28753-12 6
Brucella canis HSK A52141 6
Brucella suis VBI22 6
Brucella suis 1330 6
Brucella suis 1330 6
Brucella melitensis NI 6
Brucella melitensis M5-90 5
Brucella melitensis M28 6
Brucella melitensis bv. 1 str. 16M 6
Brucella abortus A13334 5
Brucella melitensis biovar Abortus 2308 5
Brucella abortus bv. 1 str. 9-941 4
Sinorhizobium fredii USDA 257 20
Sinorhizobium fredii HH103 16
Sinorhizobium meliloti 2011 19
Sinorhizobium meliloti GR4 30
Sinorhizobium meliloti Rm41 34
Sinorhizobium meliloti SM11 28
Sinorhizobium meliloti BL225C 30
Sinorhizobium meliloti 1021 27
Rhizobium etli CFN 42 28
Rhizobium etli bv. mimosae str. Mim1 26
Rhizobium tropici CIAT 899 21
Rhizobium leguminosarum bv. trifolii WSM2304 30
Rhizobium leguminosarum bv. trifolii WSM1325 28
Liberibacter crescens BT-1 2
Candidatus Liberibacter americanus str. Sao Paulo 1
Candidatus Liberibacter asiaticus str. gxpsy 1
Mesorhizobium australicum WSM2073 19
Hyphomicrobium nitrativorans NL23 8
Hyphomicrobium denitrificans 1NES1 8
Oligotropha carboxidovorans OM5 10
Oligotropha carboxidovorans OM5 10
Rhodopseudomonas palustris DX-1 20
Rhodopseudomonas palustris TIE-1 20
Rhodopseudomonas palustris HaA2 17
Rhodopseudomonas palustris BisB5 15
Rhodopseudomonas palustris BisB18 17
Rhodopseudomonas palustris CGA009 21
Bradyrhizobium sp. S23321 31
Bradyrhizobium sp. BTAi1 26
Bradyrhizobium oligotrophicum S58 30
Bradyrhizobium japonicum USDA 6 33
Bartonella australis Aust/NH1 1
Bartonella vinsonii subsp. berkhoffii str. Winnie 1
Bartonella quintana RM-11 1
Simiduia agarivorans SA1 = DSM 21679 7
Mannheimia succiniciproducens MBEL55E 2
Bibersteinia trehalosi USDA-ARS-USMARC-192 2
Aggregatibacter actinomycetemcomitans ANH9381 2
Aggregatibacter actinomycetemcomitans D11S-1 1
Haemophilus somnus 2336 3
Mannheimia haemolytica USMARC_2286 3
Mannheimia haemolytica M42548 3
Mannheimia haemolytica D174 3
Mannheimia haemolytica D171 1
Mannheimia haemolytica D153 3
Mannheimia haemolytica USDA-ARS-USMARC-183 3
Mannheimia haemolytica USDA-ARS-USMARC-185 3
Pasteurella multocida 36950 1
Haemophilus influenzae KR494 0
Haemophilus influenzae 10810 0
Haemophilus influenzae PittGG 0
Haemophilus influenzae 86-028NP 1
Haemophilus influenzae R2866 1
Haemophilus influenzae R2846 1
Haemophilus influenzae Rd KW20 1
Actinobacillus suis H91-0380 3
Actinobacillus pleuropneumoniae serovar 3 str. JL03 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 1
Aeromonas hydrophila ML09-119 4
Vibrio fischeri ES114 3
Vibrio sp. EJY3 10
Vibrio parahaemolyticus BB22OP 6
Vibrio alginolyticus NBRC 15630 = ATCC 17749 8
Vibrio anguillarum Listonella anguillarum M3 4
Vibrio nigripulchritudo VibrioScope 16
Vibrio vulnificus CMCP6 4
Vibrio vulnificus YJ016 5
Vibrio cholerae LMA3984-4 3
Vibrio cholerae M66-2 3
Vibrio cholerae O395 3
Vibrio cholerae IEC224 3
Vibrio cholerae O1 str. 2010EL-1786 3
Vibrio cholerae MJ-1236 2
Vibrio cholerae O1 biovar El Tor str. N16961 3
Idiomarina loihiensis GSL 199 6
Shewanella sp. W3-18-1 3
Shewanella sp. ANA-3 5
Shewanella baltica BA175 6
Shewanella baltica OS678 5
Shewanella baltica OS117 6
Shewanella baltica OS223 6
Shewanella baltica OS195 5
Shewanella baltica OS155 6
Shewanella sp. MR-7 5
Shewanella putrefaciens 200 3
Glaciecola psychrophila 170 10
Alteromonas macleodii str. 'Ionian Sea UM4b' 9
Alteromonas macleodii str. 'Ionian Sea UM7' 9
Alteromonas macleodii str. 'Ionian Sea U8' 8
Alteromonas macleodii str. 'Ionian Sea U7' 10
Alteromonas macleodii str. 'Ionian Sea U4' 8
Alteromonas macleodii str. 'Aegean Sea MED64' 11
Alteromonas macleodii str. 'English Channel 615' 7
Alteromonas macleodii AltDE1 9
Alteromonas macleodii str. 'English Channel 673' 13
Alteromonas macleodii str. 'Balearic Sea AD45' 9
Alteromonas macleodii str. 'Black Sea 11' 11
Alteromonas macleodii ATCC 27126 11
Alcanivorax dieselolei B5 17
Thalassolituus oleivorans MIL-1 3
Stenotrophomonas maltophilia D457 10
Stenotrophomonas maltophilia JV3 9
Stenotrophomonas maltophilia R551-3 11
Xylella fastidiosa subsp. fastidiosa GB514 3
Xylella fastidiosa M12 3
Xylella fastidiosa Temecula1 3
Xylella fastidiosa 9a5c 6
Xanthomonas citri subsp. citri Aw12879 11
Xanthomonas campestris pv. vesicatoria str. 85-10 14
Xanthomonas axonopodis pv. citrumelo F1 12
Xanthomonas axonopodis Xac29-1 11
Xanthomonas oryzae pv. oryzicola BLS256 9
Xanthomonas oryzae pv. oryzae MAFF 311018 8
Xanthomonas oryzae pv. oryzae KACC 10331 6
Xanthomonas campestris pv. raphani 756C 11
Xanthomonas campestris pv. campestris str. 8004 9
Xanthomonas campestris pv. campestris str. ATCC 33913 9
Spiribacter salinus M19-40 6
Thioalkalivibrio nitratireducens DSM 14787 3
Thioflavicoccus mobilis 8321 4
Coxiella burnetii CbuK_Q154 2
Coxiella burnetii CbuG_Q212 2
Coxiella burnetii RSA 331 1
Coxiella burnetii RSA 493 2
Legionella pneumophila str. Paris 5
Legionella pneumophila str. Lens 6
Legionella pneumophila subsp. pneumophila LPE509 5
Legionella pneumophila subsp. pneumophila str. Thunder Bay 5
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 5
Legionella pneumophila subsp. pneumophila 5
Legionella pneumophila subsp. pneumophila 5
Legionella pneumophila subsp. pneumophila ATCC 43290 5
Legionella pneumophila 2300/99 Alcoy 5
Proteus mirabilis BB2000 4
Morganella morganii subsp. morganii KT 5
Edwardsiella tarda C07-087 4
Edwardsiella tarda FL6-60 3
Rahnella aquatilis HX2 14
Yersinia pseudotuberculosis PB1/+ 5
Yersinia pseudotuberculosis YPIII 5
Yersinia pseudotuberculosis IP 32953 5
Yersinia pestis biovar Microtus str. 91001 5
Yersinia pestis A1122 5
Yersinia pestis Z176003 6
Yersinia pestis D182038 5
Yersinia pestis D106004 5
Yersinia pestis biovar Medievalis str. Harbin 35 5
Yersinia pestis Nepal516 5
Yersinia pestis Antiqua 6
Yersinia pestis Angola 6
Yersinia pestis CO92 5
Yersinia pestis KIM10+ 5
Yersinia enterocolitica subsp. palearctica 105.5R(r) 7
Yersinia enterocolitica subsp. palearctica Y11 6
Serratia sp. AS13 19
Serratia plymuthica S13 20
Serratia plymuthica 4Rx13 23
Serratia marcescens FGI94 18
Serratia marcescens WW4 17
Serratia liquefaciens ATCC 27592 19
Dickeya dadantii Ech586 11
Dickeya dadantii 3937 7
Pectobacterium carotovorum subsp. carotovorum PCC21 9
Pantoea ananatis LMG 5342 13
Pantoea ananatis PA13 14
Pantoea ananatis AJ13355 14
Erwinia pyrifoliae DSM 12163 9
Erwinia amylovora CFBP1430 10
Cronobacter sakazakii CMCC 45402 13
Cronobacter sakazakii SP291 10
Cronobacter sakazakii ATCC BAA-894 12
secondary endosymbiont of Heteropsylla cubana Thao2000 1
Raoultella ornithinolytica B6 15
Shigella sonnei 53G 14
Shigella flexneri 2002017 12
Shigella flexneri 2a str. 2457T 11
Shigella flexneri 2a str. 301 11
Shigella dysenteriae 1617 7
Shigella boydii Sb227 10
Salmonella bongori N268-08 15
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 9
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 11
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 10
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 10
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 12
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 14
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 11
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 11
Salmonella enterica subsp. enterica serovar Newport str. SL254 11
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 12
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 11
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 11
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 11
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 11
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 11
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 11
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 11
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 11
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 11
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 11
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 11
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 8
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 8
Salmonella enterica subsp. enterica serovar Typhi str. CT18 8
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 8
Salmonella enterica serovar Bovismorbificans genomics 11
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 13
Salmonella enterica subsp. enterica serovar Agona str. 24249 14
Salmonella enterica subsp. enterica serovar Agona str. SL483 14
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 13
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 11
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 8
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 8
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 11
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 11
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 11
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 11
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 13
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 13
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 12
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 11
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 13
Klebsiella oxytoca KCTC 1686 21
Klebsiella pneumoniae JM45 19
Klebsiella pneumoniae CG43 15
Klebsiella pneumoniae KCTC 2242 15
Klebsiella pneumoniae 342 21
Klebsiella pneumoniae subsp. pneumoniae 1084 13
Klebsiella pneumoniae subsp. pneumoniae HS11286 19
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 16
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 11
Enterobacter aerogenes EA1509E 12
Escherichia coli E24377A 14
Escherichia coli E. coli PMV-1 17
Escherichia coli JJ1886 17
Escherichia coli LY180 16
Escherichia coli APEC O78 14
Escherichia coli O7:K1 str. CE10 15
Escherichia coli O104:H4 str. 2009EL-2050 16
Escherichia coli O104:H4 str. 2009EL-2071 16
Escherichia coli O104:H4 str. 2011C-3493 16
Escherichia coli NA114 17
Escherichia coli P12b 16
Escherichia coli str. 'clone D i2' 17
Escherichia coli str. 'clone D i14' 17
Escherichia coli UM146 17
Escherichia coli 042 13
Escherichia coli Xuzhou21 13
Escherichia coli IHE3034 17
Escherichia coli UMNK88 14
Escherichia coli O83:H1 str. NRG 857C 17
Escherichia coli ABU 83972 17
Escherichia coli KO11FL 15
Escherichia coli KO11FL 15
Escherichia coli LF82 17
Escherichia coli ED1a 15
Escherichia coli IAI39 14
Escherichia coli UMN026 14
Escherichia coli 55989 15
Escherichia coli S88 15
Escherichia coli IAI1 14
Escherichia coli W 15
Escherichia coli W 15
Escherichia coli DH1 15
Escherichia coli DH1 15
Escherichia coli ATCC 8739 15
Escherichia coli BL21(DE3) 15
Escherichia coli BL21(DE3) 15
Escherichia coli SMS-3-5 16
Escherichia coli SE15 17
Escherichia coli SE11 13
Escherichia coli APEC O1 17
Escherichia coli O103:H2 str. 12009 11
Escherichia coli UTI89 17
Escherichia coli 536 17
Escherichia coli HS 15
Escherichia coli ETEC H10407 13
Escherichia coli O55:H7 str. RM12579 15
Escherichia coli O55:H7 str. CB9615 15
Escherichia coli O26:H11 str. 11368 12
Escherichia coli CFT073 17
Escherichia coli O111:H- str. 11128 13
Escherichia coli O127:H6 str. E2348/69 14
Escherichia coli O157:H7 str. TW14359 13
Escherichia coli O157:H7 str. EC4115 13
Escherichia coli O157:H7 str. Sakai 14
Escherichia coli O157:H7 str. EDL933 14
Escherichia coli str. K-12 substr. MDS42 13
Escherichia coli BW2952 14
Escherichia coli str. K-12 substr. MG1655 15
Escherichia coli str. K-12 substr. W3110 15
Escherichia coli str. K-12 substr. DH10B 14
Escherichia coli B str. REL606 15
Enterobacter cloacae SCF1 9
Enterobacter cloacae EcWSU1 12
Enterobacter cloacae subsp. cloacae ENHKU01 12
Enterobacter cloacae subsp. cloacae NCTC 9394 11
Enterobacter cloacae subsp. cloacae ATCC 13047 10
Azotobacter vinelandii CA6 16
Azotobacter vinelandii CA 16
Pseudomonas denitrificans ATCC 13867 15
Pseudomonas syringae pv. phaseolicola 1448A 16
Pseudomonas syringae pv. syringae B728a 15
Pseudomonas stutzeri CCUG 29243 14
Pseudomonas stutzeri DSM 10701 11
Pseudomonas stutzeri DSM 4166 15
Pseudomonas stutzeri RCH2 17
Pseudomonas stutzeri ATCC 17588 = LMG 11199 17
Pseudomonas monteilii SB3101 18
Pseudomonas monteilii SB3078 18
Pseudomonas putida H8234 20
Pseudomonas putida HB3267 14
Pseudomonas putida NBRC 14164 14
Pseudomonas putida DOT-T1E 18
Pseudomonas putida S16 21
Pseudomonas putida BIRD-1 17
Pseudomonas putida W619 17
Pseudomonas putida ND6 14
Pseudomonas putida KT2440 16
Pseudomonas putida GB-1 17
Pseudomonas protegens CHA0 19
Pseudomonas poae RE*1-1-14 13
Pseudomonas fluorescens F113 18
Pseudomonas fluorescens A506 15
Pseudomonas fluorescens R124 17
Pseudomonas fluorescens Pf0-1 21
Pseudomonas resinovorans NBRC 106553 16
Pseudomonas mendocina NK-01 13
Pseudomonas aeruginosa SCV20265 19
Pseudomonas aeruginosa MTB-1 18
Pseudomonas aeruginosa LES431 20
Pseudomonas aeruginosa RP73 19
Pseudomonas aeruginosa B136-33 18
Pseudomonas aeruginosa PA1R 18
Pseudomonas aeruginosa PA1 19
Pseudomonas aeruginosa DK2 18
Pseudomonas aeruginosa NCGM2.S1 18
Pseudomonas aeruginosa M18 20
Pseudomonas aeruginosa LESB58 20
Pseudomonas aeruginosa PA7 21
Pseudomonas aeruginosa PAO1 19
Acinetobacter genomosp. 13TU RUH2624 9
Acinetobacter sp. SH024 12
Acinetobacter calcoaceticus ruh2202 11
Acinetobacter baumannii ZW85-1 9
Acinetobacter baumannii TYTH-1 11
Acinetobacter baumannii BJAB0868 10
Acinetobacter baumannii BJAB0715 8
Acinetobacter baumannii BJAB07104 10
Acinetobacter baumannii TCDC-AB0715 10
Acinetobacter baumannii D1279779 8
Acinetobacter baumannii MDR-TJ 11
Acinetobacter baumannii 1656-2 9
Acinetobacter baumannii ATCC 19606 8
Acinetobacter baumannii AB307-0294 7
Acinetobacter baumannii AYE 12
Acinetobacter baumannii SDF 5
Acinetobacter baumannii MDR-ZJ06 10
Acinetobacter baumannii AB0057 7
Acinetobacter baumannii ACICU 10
Acinetobacter radioresistens SH164 11
Acinetobacter junii SH205 8
Acinetobacter johnsonii SH046 10
Acinetobacter lwoffii SH145 8
Methylophaga sp. JAM7 3
Cycloclasticus zancles 7-ME 4
Francisella noatunensis subsp. orientalis LADL--07-285A 1
Francisella tularensis subsp. mediasiatica FSC147 1
Francisella tularensis subsp. holarctica F92 1
Francisella tularensis subsp. holarctica FTNF002-00 1
Francisella tularensis subsp. holarctica OSU18 1
Francisella tularensis subsp. holarctica LVS 1
Francisella tularensis subsp. holarctica FSC200 1
Francisella tularensis subsp. tularensis TIGB03 1
Francisella tularensis subsp. tularensis TI0902 1
Francisella tularensis subsp. tularensis NE061598 1
Francisella tularensis subsp. tularensis FSC198 1
Francisella tularensis subsp. tularensis SCHU S4 1
Francisella cf. novicida Fx1 1
Candidatus Nitrososphaera gargensis Ga9.2 9
Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 6
Caldisphaera lagunensis DSM 15908 3
Aeropyrum camini SY1 = JCM 12091 1
Sulfolobus islandicus LAL14/1 13
Sulfolobus islandicus REY15A 14
Sulfolobus islandicus HVE10/4 14
Sulfolobus islandicus Y.G.57.14 14
Sulfolobus islandicus L.S.2.15 14
Sulfolobus islandicus M.16.27 14
Sulfolobus islandicus M.14.25 14
Sulfolobus islandicus M.16.4 15
Sulfolobus islandicus L.D.8.5 14
Sulfolobus solfataricus 98/2 13
Sulfolobus acidocaldarius SUSAZ 10
Sulfolobus acidocaldarius Ron12/I 10
Sulfolobus acidocaldarius N8 9
Methanolobus psychrophilus R15 1
Methanosarcina mazei Tuc01 1
Archaeoglobus sulfaticallidus PM70-1 0
Thermococcus sp. AM4 1
Thermococcus sp. CL1 1
Thermococcus litoralis DSM 5473 1
Pyrococcus sp. NA2 1
Pyrococcus furiosus DSM 3638 1
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1
Ferroplasma acidarmanus fer1 5
Halovivax ruber XH-70 5
Natrinema pellirubrum DSM 15624 8
Natronococcus occultus SP4 11
Natronobacterium gregoryi SP2 5
Haloquadratum walsbyi C23 8
Halorhabdus tiamatea SARL4B 3
Natronomonas moolapensis 8.8.11 8
Haloarcula hispanica N601 10
Methanobacterium sp. SWAN-1 1
Genome Number
Homo sapiens 69_37 8
Pan troglodytes 69_2.1.4 7
Gorilla gorilla 69_3.1 10
Pongo abelii 69_2 10
Nomascus leucogenys 69_1.0 7
Macaca mulatta 69_1 7
Callithrix jacchus 69_3.2.1 8
Otolemur garnettii 69_3 10
Tarsius syrichta 69_1 9
Microcebus murinus 69_1 9
Rattus norvegicus 69_3.4 10
Mus musculus 69_38 7
Dipodomys ordii 69_1 5
Ictidomys tridecemlineatus 69_2 8
Cavia porcellus 69_3 7
Oryctolagus cuniculus 69_2 9
Ochotona princeps 69 11
Tupaia belangeri 69 9
Sus scrofa 69_10.2 5
Bos taurus 69_3.1 9
Vicugna pacos 69_1 4
Tursiops truncatus 69_1 10
Mustela putorius furo 69_1.0 9
Ailuropoda melanoleuca 69_1 9
Canis familiaris 69_3.1 9
Felis catus 69 10
Equus caballus 69_2 8
Myotis lucifugus 69_2.0 11
Pteropus vampyrus 69_1 8
Sorex araneus 69_1 6
Erinaceus europaeus 69 7
Procavia capensis 69_1 10
Loxodonta africana 69_3 8
Echinops telfairi 69 8
Dasypus novemcinctus 69_2 5
Choloepus hoffmanni 69_1 7
Macropus eugenii 69_1.0 9
Sarcophilus harrisii 69_7.0 8
Monodelphis domestica 69_5 6
Ornithorhynchus anatinus 69_5 7
Petromyzon marinus 69_7.0 5
Meleagris gallopavo 69_2 9
Gallus gallus 69_2 8
Taeniopygia guttata 69_3.2.4 8
Pelodiscus sinensis 69_1.0 7
Anolis carolinensis 69_2.0 9
Xenopus tropicalis 69_4.2 8
Latimeria chalumnae 69_1 8
Gadus morhua 69_1 10
Tetraodon nigroviridis 69_8 14
Takifugu rubripes 69_4 5
Gasterosteus aculeatus 69_1 7
Oryzias latipes 69_1 5
Xiphophorus maculatus 69_4.4.2 7
Oreochromis niloticus 69_1.0 6
Danio rerio 69_9 7
Ciona savignyi 69_2.0 9
Ciona intestinalis 69 14
Drosophila melanogaster 69_5 3
Caenorhabditis elegans 69_215 10
Saccharomyces cerevisiae 69_4 20
Arabidopsis thaliana 10 19
Genome Number
simLC - Simulated Low Complexity Metagenome 84
simMC - Simulated Medium Complexity Metagenome 102
simHC - Simulated High Complexity Metagenome 112
Guerrero Negro salt ponds hypersaline mat 02(H) 2
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg 15
Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring 37
Combined 143
Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring 13
Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs 33
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top 125
3_Below_base_of_euphotic 10
Sludge/Australian, Phrap Assembly 22
Oak Ridge Pristine Groundwater FRC FW301 117
Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 9
1_050719N 26
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) 115
Olavius algarvensis endosymbiont metagenome Gamma3 7
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< 27
1_Upper_euphotic 6
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots 22
Air microbial communities Singapore indoor air filters 2 69
Guerrero Negro salt ponds hypersaline mat 07(S) 7
4_Deep_abyss 22
Atta cephalotes fungus garden (ACEF) 58
Guerrero Negro salt ponds hypersaline mat 09(Y) 6
Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills 17
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) 52
Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr 5
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime 16
Air microbial communities Singapore indoor air filters 1 41
The Salmonella enterica Pan-genome 343
Termite Protist Endosymbiont Community 3
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 16
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 35
Dump bottom (Dump bottom) 204
Activated sludge plasmid pool Morges-2009 (Newbler) 2
Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin 16
Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs 38
Dump top (Dump top) 147
Mouse Gut Community ob1 1
Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin 15
Freshwater propionate enrichment of Brocadia fulgida 33
Soil microbial communities from Minnesota Farm 130
Marine anammox bioreactor enriched for Scalindua species 10
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring 33
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) 126
Guerrero Negro salt ponds hypersaline mat 06(P) 11
Wastewater Terephthalate-degrading communities from Bioreactor 29
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil 115
Human Gut Community Subject 7 10
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 26
Guerrero Negro salt ponds hypersaline mat 04(N) 8
Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring 25
5_050719P 69
Guerrero Negro salt ponds hypersaline mat 10(Z) 7
Uranium Contaminated Groundwater FW106 20
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) 61
Olavius algarvensis endosymbiont metagenome Delta4 6
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 22
Methylotrophic community from Lake Washington sediment Methanol enrichment 59
Guerrero Negro salt ponds hypersaline mat 05(O) 6
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex 16
Methylotrophic community from Lake Washington sediment Methane enrichment 50
Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 4
Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined 15
2_050719S 41
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ 251
6_Upper_euphotic 3
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga 16
Sludge/US, Phrap Assembly 32
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- 165
Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge 2
Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring 14
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 36
Cyphomyrmex longiscapus fungus garden 137
Mouse Gut Community lean1 1
7_Oxygen_minimum_layer 15
Methylotrophic community from Lake Washington sediment Formate enrichment 34
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- 133
Bath Hot Springs, filamentous community 12
Methylotrophic community from Lake Washington sediment Methylamine enrichment 33
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) 129
Activated sludge plasmid pool Visp-2009 (Newbler) 10
Olavius algarvensis endosymbiont metagenome Delta1 27
Bath Hot Springs, planktonic community 10
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 27
Fungus garden combined (combined) 90
Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region 7
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may 26
4_050719Q 68
Guerrero Negro salt ponds hypersaline mat 08(T) 7
Sludge/US, Jazz Assembly 20
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment 66
5_Below_upper_mesopelagic 6
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats 19
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) 55
Guerrero Negro salt ponds hypersaline mat 01(G) 6
Human Gut Community Subject 8 18
3_050719R 49
Global Ocean Sampling Expedition (GOS) 6252
Hindgut microbiome of Nasutitermes sp. (Costa Rica) 5
Endophytic microbiome from Rice 16
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer 36
Methylotrophic community from Lake Washington sediment combined (v2) 240
Guerrero Negro salt ponds hypersaline mat 03(I) 3
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 16
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu 39
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) 160