Family Assignments

Domains Proteins SCOP Link Families
17 15 SCOP 48404 Ankyrin repeat
9 9 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52686 ABC transporter ATPase domain-like
9 9 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
8 7 SCOP 81269 Extended AAA-ATPase domain
6 6 SCOP 52670 RecA protein-like (ATPase-domain)
6 4 SCOP 81268 Tandem AAA-ATPase domain
4 4 SCOP 52592 G proteins
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 52541 Nucleotide and nucleoside kinases
2 2 SCOP 46610 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 1 SCOP 48593 GroEL chaperone, ATPase domain
2 2 SCOP 50448 Elongation factors
2 2 SCOP 50678 ValRS/IleRS/LeuRS editing domain
2 2 SCOP 51521 Family 1 of glycosyl hydrolase
2 2 SCOP 52652 Nitrogenase iron protein-like
2 1 SCOP 53068 Actin/HSP70
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 54212 Translational machinery components
2 2 SCOP 54720 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 SCOP 54920 Nucleoside diphosphate kinase, NDK
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 75621 Release factor
2 2 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1 1 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48335 DNA repair protein MutS, domain III
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50136 Alcohol dehydrogenase-like, N-terminal domain
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50307 DNA ligase/mRNA capping enzyme postcatalytic domain
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50490 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
1 1 SCOP 50495 Prokaryotic proteases
1 1 SCOP 50979 WD40-repeat
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51736 Alcohol dehydrogenase-like, C-terminal domain
1 1 SCOP 51751 Tyrosine-dependent oxidoreductases
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52147 Mug-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52325 DJ-1/PfpI
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52901 Glutathione peroxidase-like
1 1 SCOP 52955 Anticodon-binding domain of Class II aaRS
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53118 DnaQ-like 3'-5' exonuclease
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53201 Leucine aminopeptidase, C-terminal domain
1 1 SCOP 53402 Cystathionine synthase-like
1 1 SCOP 53417 GABA-aminotransferase-like
1 1 SCOP 53531 Haloperoxidase
1 1 SCOP 53645 Lysophospholipase
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53851 Phosphate binding protein-like
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54229 Ribonuclease PH domain 1-like
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54714 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 SCOP 54748 Ribosomal L11/L12e N-terminal domain
1 1 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55121 Pseudouridine synthase I TruA
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55272 DNA repair protein MutS, domain I
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55470 NADH oxidase/flavin reductase
1 1 SCOP 55505 Neurolysin-like
1 1 SCOP 55932 Glutamine synthetase catalytic domain
1 1 SCOP 56038 B3/B4 domain of PheRS, PheT
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56236 Class II glutamine amidotransferases
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56732 DNA primase DnaG catalytic core
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56802 Acetyl-CoA synthetase-like
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 63801 ATP sulfurylase N-terminal domain
1 1 SCOP 63979 ATP sulfurylase catalytic domain
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69797 Thymidylate synthase-complementing protein Thy1
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75323 Exonuclease RecJ
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75626 YebC-like
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 89800 Deoxycytidylate deaminase-like
1 1 SCOP 90124 ABC transporter transmembrane region
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 117558 Type II thymidine kinase
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 140479 LemA-like
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141092 Ribosomal protein L21p
1 1 SCOP 143812 GatB/GatE catalytic domain-like

The following families have one or more weak hits: