Domain assignment for gi|387625725|ref|YP_006061897.1| from Streptococcus pneumoniae INV104

Other proteins with this domain architecture

See the phylogenetic distribution for this domain architecture

Domain Assignment Details

Start Residue End Residue Superfamily Superfamily E-value Family Family E-value Closest structure View
48 169 Insert subdomain of RNA polymerase alpha subunit 3.53e-42 Insert subdomain of RNA polymerase alpha subunit 0.0000411 1bdf A:53-178 Alignments
4 224 RBP11-like subunits of RNA polymerase 1.81e-29 RNA polymerase alpha subunit dimerisation domain 0.001 1iw7 A:1-49,A:173-229 Alignments
246 309 C-terminal domain of RNA polymerase alpha subunit 1.7e-22 C-terminal domain of RNA polymerase alpha subunit 0.0000795 1z3e B:245-311 Alignments

Protein Sequence Details

Sequence length 311
Comment DNA-directed RNA polymerase subunit alpha [Streptococcus pneumoniae INV104]
Sequence
MIEFEKPNITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIDGVLHEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKIIELDVEGPAEVTAGDILTDSDIEIVNPDHYLFTIGEGSSLKATMTVNSGRGYVPADENKKDNAPVGTLAVDSIYTPVTKVNYQVEPARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLDLFTNLTEIAKSTEVMKEADTESDDRILDRTIEELDLSVRSYNCLKRAGINTVHDLTEKSEAEMMKVRNLGRKSLEEVKLKLIDLGLGLKDK

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Sequence (FASTA)