Family Assignments

Domains Proteins SCOP Link Families
42 42 SCOP 52686 ABC transporter ATPase domain-like
40 39 SCOP 53707 Formate dehydrogenase/DMSO reductase, domains 1-3
7 7 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
7 5 SCOP 81269 Extended AAA-ATPase domain
6 6 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
5 4 SCOP 52441 BC N-terminal domain-like
5 5 SCOP 52592 G proteins
5 5 SCOP 52670 RecA protein-like (ATPase-domain)
5 5 SCOP 53851 Phosphate binding protein-like
5 4 SCOP 56067 BC ATP-binding domain-like
4 4 SCOP 52652 Nitrogenase iron protein-like
4 2 SCOP 53068 Actin/HSP70
4 4 SCOP 53272 Phosphoribosyltransferases (PRTases)
4 4 SCOP 53384 AAT-like
4 4 SCOP 53417 GABA-aminotransferase-like
4 4 SCOP 54884 Ferredoxin domains from multidomain proteins
4 4 SCOP 55921 Creatinase/aminopeptidase
4 3 SCOP 81268 Tandem AAA-ATPase domain
3 3 SCOP 47241 Ferritin
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 51751 Tyrosine-dependent oxidoreductases
3 3 SCOP 52403 N-type ATP pyrophosphatases
3 3 SCOP 53204 Bacterial dinuclear zinc exopeptidases
3 3 SCOP 53672 Aspartate/ornithine carbamoyltransferase
3 1 SCOP 55974 S-adenosylmethionine synthetase
3 3 SCOP 142721 PyrH-like
3 3 SCOP 159832 PBP transglycosylase domain-like
3 3 SCOP 161071 SNF-like
2 2 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 SCOP 50448 Elongation factors
2 2 SCOP 51247 BC C-terminal domain-like
2 2 SCOP 51659 Endonuclease IV
2 2 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
2 2 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
2 2 SCOP 51848 LDH N-terminal domain-like
2 2 SCOP 52017 LeuD-like
2 2 SCOP 52173 CheY-related
2 2 SCOP 53402 Cystathionine synthase-like
2 2 SCOP 53721 ALDH-like
2 2 SCOP 53733 Aconitase iron-sulfur domain
2 2 SCOP 53763 UDP-N-acetylglucosamine 2-epimerase
2 2 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
2 2 SCOP 55348 GAPDH-like
2 2 SCOP 56015 Nitrite and sulphite reductase 4Fe-4S domain-like
2 2 SCOP 56060 ATP-binding domain of peptide synthetases
2 2 SCOP 56236 Class II glutamine amidotransferases
2 2 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
2 2 SCOP 56802 Acetyl-CoA synthetase-like
2 2 SCOP 75621 Release factor
2 2 SCOP 75648 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 SCOP 82550 DegV-like
2 2 SCOP 102945 RelA/SpoT domain
2 2 SCOP 160336 DsrA/DsrB N-terminal-domain-like
1 1 SCOP 46907 Ribosomal protein L11, C-terminal domain
1 1 SCOP 47064 Ribosomal protein S15
1 1 SCOP 47447 Signal peptide-binding domain
1 1 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 SCOP 48109 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 SCOP 48151 Endonuclease III
1 1 SCOP 48191 UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
1 1 SCOP 48222 N-acylglucosamine (NAG) epimerase
1 1 SCOP 48257 Citrate synthase
1 1 SCOP 48558 L-aspartase/fumarase
1 1 SCOP 48593 GroEL chaperone, ATPase domain
1 1 SCOP 48711 Di-heme elbow motif
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50136 Alcohol dehydrogenase-like, N-terminal domain
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50282 Cold shock DNA-binding domain-like
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50476 PNP-oxidase like
1 1 SCOP 50495 Prokaryotic proteases
1 1 SCOP 50696 Formate dehydrogenase/DMSO reductase, C-terminal domain
1 1 SCOP 51168 Galactoside acetyltransferase-like
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51420 Alanine racemase-like, N-terminal domain
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51599 Class I DAHP synthetase
1 1 SCOP 51605 Enolase
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51731 Methylenetetrahydrofolate reductase
1 1 SCOP 51736 Alcohol dehydrogenase-like, C-terminal domain
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
1 1 SCOP 52005 Class III anaerobic ribonucleotide reductase NRDD subunit
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52097 Clp protease, ClpP subunit
1 1 SCOP 52100 Tail specific protease, catalytic domain
1 1 SCOP 52103 Crotonase-like
1 1 SCOP 52147 Mug-like
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52300 S-adenosylhomocystein hydrolase
1 1 SCOP 52305 Type II 3-dehydroquinate dehydratase
1 1 SCOP 52318 Class I glutamine amidotransferases (GAT)
1 1 SCOP 52397 Adenylyltransferase
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52513 NagB-like
1 1 SCOP 52541 Nucleotide and nucleoside kinases
1 1 SCOP 52901 Glutathione peroxidase-like
1 1 SCOP 52931 Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52976 Maf-like
1 1 SCOP 53042 gamma,delta resolvase, catalytic domain
1 1 SCOP 53057 beta-carbonic anhydrase, cab
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53138 Ribosomal protein L18 and S11
1 1 SCOP 53168 Purine and uridine phosphorylases
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53224 Aminoacid dehydrogenases
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53324 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53487 Carboxylesterase
1 1 SCOP 53620 Thiamin biosynthesis kinases
1 1 SCOP 53634 Carbamate kinase
1 1 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
1 1 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53804 Cobalt chelatase CbiK
1 1 SCOP 54212 Translational machinery components
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54632 CBS-domain pair
1 1 SCOP 54748 Ribosomal L11/L12e N-terminal domain
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54914 Prokaryotic signal transducing protein
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 54981 EF-G/eEF-2 domains III and V
1 1 SCOP 55041 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55209 Enolpyruvate transferase, EPT
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55327 PurM N-terminal domain-like
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55817 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55914 Amidinotransferase
1 1 SCOP 56043 PurM C-terminal domain-like
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56054 Ribosomal protein L6
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56220 DNase I-like
1 1 SCOP 56229 Aldehyde ferredoxin oxidoreductase, N-terminal domain
1 1 SCOP 56272 Histidine decarboxylase
1 1 SCOP 56575 Serpins
1 1 SCOP 56635 Heme-dependent catalases
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56763 Nickel-iron hydrogenase, large subunit
1 1 SCOP 56771 Nickel-iron hydrogenase, small subunit
1 1 SCOP 56785 HAD-related
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 56822 Hybrid cluster protein (prismane protein)
1 1 SCOP 56895 Aquaporin-like
1 1 SCOP 58105 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 SCOP 63883 MoeA N-terminal region -like
1 1 SCOP 63966 Precorrin-8X methylmutase CbiC/CobH
1 1 SCOP 63984 Sir2 family of transcriptional regulators
1 1 SCOP 64089 BadF/BadG/BcrA/BcrD-like
1 1 SCOP 64183 Manganese-dependent inorganic pyrophosphatase (family II)
1 1 SCOP 64264 Prokaryotic ribosomal protein L17
1 1 SCOP 64380 Dimethylarginine dimethylaminohydrolase DDAH
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 69427 UDP-galactopyranose mutase, N-terminal domain
1 1 SCOP 69565 Pyridoxal-dependent decarboxylase
1 1 SCOP 69722 DsrC, the gamma subunit of dissimilatory sulfite reductase
1 1 SCOP 69766 IpsF-like
1 1 SCOP 69865 Argininosuccinate synthetase, C-terminal domain
1 1 SCOP 69892 Iron-containing alcohol dehydrogenase
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
1 1 SCOP 75297 N-acetyl-l-glutamate kinase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 82258 SAH/MTA deaminase-like
1 1 SCOP 82371 YbeA-like
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 82680 N-utilization substance G protein NusG, N-terminal domain
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88746 PFOR Pyr module
1 1 SCOP 88771 PFOR PP module
1 1 SCOP 88854 Protein kinases, catalytic subunit
1 1 SCOP 89156 TorD-like
1 1 SCOP 89494 HMGL-like
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89797 CoA-transferase family III (CaiB/BaiF)
1 1 SCOP 90124 ABC transporter transmembrane region
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 101340 HD domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101822 Aminopeptidase/glucanase lid domain
1 1 SCOP 102304 Homoserine kinase ThrH
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 103232 Arginine deiminase
1 1 SCOP 103257 Hypothetical protein TM0160
1 1 SCOP 109613 DAK1
1 1 SCOP 109725 Conserved carboxylase domain
1 1 SCOP 110388 MoCo biosynthesis proteins
1 1 SCOP 110863 Proline racemase
1 1 SCOP 111155 Porphyromonas-type peptidylarginine deiminase
1 1 SCOP 111353 Ammonium transporter
1 1 SCOP 117449 LamB/YcsF-like
1 1 SCOP 117783 YbjQ-like
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 140479 LemA-like
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141131 Acetamidase/Formamidase-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 141735 HisI-like
1 1 SCOP 141755 PdxS-like
1 1 SCOP 142077 HTS-like
1 1 SCOP 142093 ThiI-like
1 1 SCOP 142606 N-6 DNA Methylase-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 158561 BH3980-like
1 1 SCOP 158833 Tex N-terminal region-like
1 1 SCOP 159249 PH0987 C-terminal domain-like
1 1 SCOP 159444 SP0239-like
1 1 SCOP 159635 Tex RuvX-like domain-like
1 1 SCOP 160921 PSTPO5379-like
1 1 SCOP 161099 MetI-like

The following families have one or more weak hits: