Family Assignments

Domains Proteins SCOP Link Families
84 84 SCOP 88854 Protein kinases, catalytic subunit
65 59 SCOP 48404 Ankyrin repeat
22 22 SCOP 52641 Motor proteins
22 19 SCOP 81269 Extended AAA-ATPase domain
21 21 SCOP 52592 G proteins
14 14 SCOP 56251 Proteasome subunits
13 13 SCOP 54002 Papain-like
12 12 SCOP 56310 Protein serine/threonine phosphatase
10 7 SCOP 52686 ABC transporter ATPase domain-like
10 9 SCOP 81268 Tandem AAA-ATPase domain
9 9 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52491 Tubulin, GTPase domain
9 9 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
8 4 SCOP 53068 Actin/HSP70
6 6 SCOP 54496 UBC-related
4 4 SCOP 47114 Nucleosome core histones
4 4 SCOP 54535 FKBP immunophilin/proline isomerase
4 4 SCOP 55308 Tubulin, C-terminal domain
4 4 SCOP 69892 Iron-containing alcohol dehydrogenase
4 4 SCOP 81605 PP2C-like
3 3 SCOP 47502 Calmodulin-like
3 3 SCOP 50448 Elongation factors
3 3 SCOP 52670 RecA protein-like (ATPase-domain)
3 3 SCOP 52901 Glutathione peroxidase-like
3 3 SCOP 53272 Phosphoribosyltransferases (PRTases)
3 3 SCOP 55730 N-acetyl transferase, NAT
3 3 SCOP 55921 Creatinase/aminopeptidase
3 1 SCOP 55974 S-adenosylmethionine synthetase
3 3 SCOP 64485 RNA-polymerase beta
3 3 SCOP 64490 RNA-polymerase beta-prime
3 3 SCOP 74771 Clathrin adaptor core protein
3 3 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 SCOP 46463 Globins
2 2 SCOP 48246 Protein prenyltransferases
2 2 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
2 2 SCOP 51431 Aldo-keto reductases (NADP)
2 2 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
2 2 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
2 2 SCOP 52318 Class I glutamine amidotransferases (GAT)
2 2 SCOP 52513 NagB-like
2 2 SCOP 52652 Nitrogenase iron protein-like
2 2 SCOP 52800 Dual specificity phosphatase-like
2 2 SCOP 53168 Purine and uridine phosphorylases
2 2 SCOP 53324 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 SCOP 53402 Cystathionine synthase-like
2 2 SCOP 53461 UDP-glucose pyrophosphorylase
2 2 SCOP 53775 Glutaminase/Asparaginase
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55348 GAPDH-like
2 2 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
2 2 SCOP 56205 Hect, E3 ligase catalytic domain
2 2 SCOP 56673 DNA polymerase I
2 2 SCOP 63412 MPP-like
2 2 SCOP 63984 Sir2 family of transcriptional regulators
2 2 SCOP 88746 PFOR Pyr module
2 2 SCOP 88771 PFOR PP module
2 2 SCOP 102422 Myotubularin-like phosphatases
2 2 SCOP 102492 CAF1-like ribonuclease
2 2 SCOP 102755 Hsp90 middle domain
2 2 SCOP 110509 NLI interacting factor-like phosphatase
2 2 SCOP 159112 RNB domain-like
1 1 SCOP 46566 Chaperone J-domain
1 1 SCOP 47577 Calponin-homology domain, CH-domain
1 1 SCOP 47808 5' to 3' exonuclease, C-terminal subdomain
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48180 Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
1 1 SCOP 48385 HEAT repeat
1 1 SCOP 48390 Clathrin heavy chain proximal leg segment
1 1 SCOP 48446 14-3-3 protein
1 1 SCOP 48548 PDEase
1 1 SCOP 49448 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50307 DNA ligase/mRNA capping enzyme postcatalytic domain
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50678 ValRS/IleRS/LeuRS editing domain
1 1 SCOP 50719 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
1 1 SCOP 50990 Clathrin heavy-chain terminal domain
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51420 Alanine racemase-like, N-terminal domain
1 1 SCOP 51427 "Hypothetical" protein ybl036c
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51622 Pyruvate kinase
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51848 LDH N-terminal domain-like
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 51931 GDI-like N domain
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52034 Group II chaperonin (CCT, TRIC), apical domain
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52211 Succinyl-CoA synthetase domains
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52468 Deoxyhypusine synthase, DHS
1 1 SCOP 52541 Nucleotide and nucleoside kinases
1 1 SCOP 52773 Histone deacetylase, HDAC
1 1 SCOP 52789 Low-molecular-weight phosphotyrosine protein phosphatases
1 1 SCOP 52931 Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53089 Glycerol kinase
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53143 ERF1/Dom34 middle domain-like
1 1 SCOP 53224 Aminoacid dehydrogenases
1 1 SCOP 53240 Malic enzyme N-domain
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53342 Fibrillarin homologue
1 1 SCOP 53384 AAT-like
1 1 SCOP 53417 GABA-aminotransferase-like
1 1 SCOP 53614 Ribokinase-like
1 1 SCOP 53634 Carbamate kinase
1 1 SCOP 53672 Aspartate/ornithine carbamoyltransferase
1 1 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53766 Oligosaccharide phosphorylase
1 1 SCOP 53785 Phosphofructokinase
1 1 SCOP 53791 Tetrapyrrole methylase
1 1 SCOP 53796 PEP carboxykinase C-terminal domain
1 1 SCOP 53921 Fe-only hydrogenase
1 1 SCOP 53928 Cytidine deaminase
1 1 SCOP 54193 L15e
1 1 SCOP 54212 Translational machinery components
1 1 SCOP 54237 Ubiquitin-related
1 1 SCOP 54649 DLC
1 1 SCOP 54687 Ribosomal protein L10e
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55299 YjgF/L-PSP
1 1 SCOP 55323 ERF1/Dom34 C-terminal domain-like
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55376 Glucose 6-phosphate dehydrogenase-like
1 1 SCOP 55425 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 SCOP 55482 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 SCOP 55638 Cell cycle regulatory proteins
1 1 SCOP 55748 N-myristoyl transferase, NMT
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55910 Ribosome anti-association factor eIF6 (aIF6)
1 1 SCOP 56020 The spindle assembly checkpoint protein mad2
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56092 ATP-dependent DNA ligase catalytic domain
1 1 SCOP 56171 Phoshoinositide 3-kinase (PI3K), catalytic domain
1 1 SCOP 56220 DNase I-like
1 1 SCOP 56291 ROO N-terminal domain-like
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56543 Substrate-binding domain of HMG-CoA reductase
1 1 SCOP 56575 Serpins
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 56822 Hybrid cluster protein (prismane protein)
1 1 SCOP 57799 Casein kinase II beta subunit
1 1 SCOP 63611 Pumilio repeat
1 1 SCOP 63873 Translationally controlled tumor protein TCTP (histamine-releasing factor)
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64154 YjeF N-terminal domain-like
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64183 Manganese-dependent inorganic pyrophosphatase (family II)
1 1 SCOP 64388 Phoshatidylinositol transfer protein, PITP
1 1 SCOP 69501 DTD-like
1 1 SCOP 75041 SelR domain
1 1 SCOP 75521 Clathrin coat assembly domain
1 1 SCOP 81838 BEACH domain
1 1 SCOP 82458 Trunk domain of Sec23/24
1 1 SCOP 82568 Ubiquitin carboxyl-terminal hydrolase, UCH
1 1 SCOP 82755 C-terminal, gelsolin-like domain of Sec23/24
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88784 rRNA adenine dimethylase-like
1 1 SCOP 89125 Nop domain
1 1 SCOP 89494 HMGL-like
1 1 SCOP 89572 Biotin dependent carboxylase carboxyltransferase domain
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100948 Isochorismatase-like hydrolases
1 1 SCOP 101153 Mob1/phocein
1 1 SCOP 101407 Mo25 protein
1 1 SCOP 102463 Peptidyl-tRNA hydrolase II
1 1 SCOP 102575 NOL1/NOP2/sun
1 1 SCOP 102706 NIF3 (NGG1p interacting factor 3)-like
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 103197 Roadblock/LC7 domain
1 1 SCOP 103492 Preprotein translocase SecY subunit
1 1 SCOP 110436 Ornithine cyclodeaminase-like
1 1 SCOP 118076 TRAPP components
1 1 SCOP 140819 B56-like
1 1 SCOP 140985 PTPA-like
1 1 SCOP 143927 beta-CASP RNA-metabolising hydrolases
1 1 SCOP 158600 MgsA/YrvN C-terminal domain-like
1 1 SCOP 159513 EMG1/NEP1-like
1 1 SCOP 159697 TRM1-like

The following families have one or more weak hits: