Family Assignments

Domains Proteins SCOP Link Families
12 12 SCOP 52686 ABC transporter ATPase domain-like
10 9 SCOP 52592 G proteins
10 10 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
8 8 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
6 5 SCOP 53068 Actin/HSP70
6 4 SCOP 81268 Tandem AAA-ATPase domain
6 5 SCOP 81269 Extended AAA-ATPase domain
5 5 SCOP 52652 Nitrogenase iron protein-like
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 50448 Elongation factors
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 51591 Class II FBP aldolase
3 3 SCOP 52541 Nucleotide and nucleoside kinases
3 3 SCOP 52670 RecA protein-like (ATPase-domain)
3 3 SCOP 54212 Translational machinery components
3 1 SCOP 55974 S-adenosylmethionine synthetase
2 2 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
2 2 SCOP 51413 Inosine monophosphate dehydrogenase (IMPDH)
2 2 SCOP 51622 Pyruvate kinase
2 2 SCOP 52318 Class I glutamine amidotransferases (GAT)
2 2 SCOP 52403 N-type ATP pyrophosphatases
2 2 SCOP 52778 CAT-like
2 1 SCOP 53080 Acetokinase-like
2 1 SCOP 53089 Glycerol kinase
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53168 Purine and uridine phosphorylases
2 2 SCOP 53272 Phosphoribosyltransferases (PRTases)
2 2 SCOP 53614 Ribokinase-like
2 2 SCOP 54224 DNA gyrase/MutL, second domain
2 2 SCOP 54632 CBS-domain pair
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 56720 Type II DNA topoisomerase
2 2 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
2 2 SCOP 101340 HD domain
2 2 SCOP 101905 GyrA/ParC C-terminal domain-like
2 2 SCOP 143959 Sulfatase-modifying factor-like
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 46974 Enzyme IIa from lactose specific PTS, IIa-lac
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1 1 SCOP 47786 NAD+-dependent DNA ligase, domain 3
1 1 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48169 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 SCOP 48558 L-aspartase/fumarase
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
1 1 SCOP 51168 Galactoside acetyltransferase-like
1 1 SCOP 51191 Type I phosphomannose isomerase
1 1 SCOP 51262 Glucose permease-like
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51431 Aldo-keto reductases (NADP)
1 1 SCOP 51521 Family 1 of glycosyl hydrolase
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51736 Alcohol dehydrogenase-like, C-terminal domain
1 1 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
1 1 SCOP 51848 LDH N-terminal domain-like
1 1 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
1 1 SCOP 51943 FAD/NAD-linked reductases, N-terminal and central domains
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52142 Uracil-DNA glycosylase
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52513 NagB-like
1 1 SCOP 52584 Phosphoribulokinase/pantothenate kinase
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53201 Leucine aminopeptidase, C-terminal domain
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53402 Cystathionine synthase-like
1 1 SCOP 53417 GABA-aminotransferase-like
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53785 Phosphofructokinase
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54714 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55348 GAPDH-like
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55425 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 SCOP 55502 Neutral endopeptidase (neprilysin)
1 1 SCOP 55595 HPr-like
1 1 SCOP 55832 Thymidylate synthase/dCMP hydroxymethylase
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56054 Ribosomal protein L6
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56421 Peptide deformylase
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56732 DNA primase DnaG catalytic core
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64186 HPr kinase HprK C-terminal domain
1 1 SCOP 64398 Hsp33 domain
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 69066 RNase III catalytic domain-like
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74756 3-Methyladenine DNA glycosylase I (Tag)
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75554 Smc hinge domain
1 1 SCOP 75621 Release factor
1 1 SCOP 75626 YebC-like
1 1 SCOP 81656 Meta-cation ATPase, catalytic domain P
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82052 Obg GTP-binding protein N-terminal domain
1 1 SCOP 82261 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82550 DegV-like
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88741 Branched-chain alpha-keto acid dehydrogenase Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88766 Branched-chain alpha-keto acid dehydrogenase PP module
1 1 SCOP 88854 Protein kinases, catalytic subunit
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 100948 Isochorismatase-like hydrolases
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101479 ADP-ribosylglycohydrolase
1 1 SCOP 102118 Oxygen-independent coproporphyrinogen III oxidase HemN
1 1 SCOP 102660 PlsX-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 102945 RelA/SpoT domain
1 1 SCOP 110354 Outer surface protein, N-terminal domain
1 1 SCOP 110396 CutC-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 117558 Type II thymidine kinase
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 118216 Proton glutamate symport protein
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 142093 ThiI-like
1 1 SCOP 142647 TrmB-like
1 1 SCOP 142721 PyrH-like
1 1 SCOP 143642 LplA-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 158600 MgsA/YrvN C-terminal domain-like
1 1 SCOP 159112 RNB domain-like

The following families have one or more weak hits: