Family Assignments

Domains Proteins SCOP Link Families
13 10 SCOP 81269 Extended AAA-ATPase domain
10 10 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
10 7 SCOP 81268 Tandem AAA-ATPase domain
9 9 SCOP 52686 ABC transporter ATPase domain-like
9 9 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
5 5 SCOP 52592 G proteins
4 4 SCOP 52670 RecA protein-like (ATPase-domain)
4 2 SCOP 53068 Actin/HSP70
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 52652 Nitrogenase iron protein-like
3 3 SCOP 53168 Purine and uridine phosphorylases
3 3 SCOP 53851 Phosphate binding protein-like
3 1 SCOP 55974 S-adenosylmethionine synthetase
3 3 SCOP 64519 Phase 1 flagellin
3 3 SCOP 161099 MetI-like
2 1 SCOP 48404 Ankyrin repeat
2 2 SCOP 50448 Elongation factors
2 2 SCOP 50495 Prokaryotic proteases
2 2 SCOP 51570 Class I aldolase
2 2 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
2 2 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
2 2 SCOP 52097 Clp protease, ClpP subunit
2 1 SCOP 53080 Acetokinase-like
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53402 Cystathionine synthase-like
2 2 SCOP 53417 GABA-aminotransferase-like
2 2 SCOP 53785 Phosphofructokinase
2 2 SCOP 53811 TroA-like
2 2 SCOP 53823 L-arabinose binding protein-like
2 2 SCOP 54212 Translational machinery components
2 1 SCOP 54229 Ribonuclease PH domain 1-like
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 56350 Lambda integrase-like, catalytic core
2 1 SCOP 63412 MPP-like
2 2 SCOP 75621 Release factor
2 1 SCOP 81987 Tp47 lipoprotein, middle and C-terminal domains
1 1 SCOP 46566 Chaperone J-domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47241 Ferritin
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48030 FliG
1 1 SCOP 48151 Endonuclease III
1 1 SCOP 48154 Mismatch glycosylase
1 1 SCOP 48180 Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
1 1 SCOP 48335 DNA repair protein MutS, domain III
1 1 SCOP 48593 GroEL chaperone, ATPase domain
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51420 Alanine racemase-like, N-terminal domain
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52100 Tail specific protease, catalytic domain
1 1 SCOP 52147 Mug-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52318 Class I glutamine amidotransferases (GAT)
1 1 SCOP 52397 Adenylyltransferase
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52739 Methylesterase CheB, C-terminal domain
1 1 SCOP 52901 Glutathione peroxidase-like
1 1 SCOP 52931 Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53134 RuvC resolvase
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53255 Cofactor-dependent phosphoglycerate mutase
1 1 SCOP 53324 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53620 Thiamin biosynthesis kinases
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53796 PEP carboxykinase C-terminal domain
1 1 SCOP 54002 Papain-like
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54632 CBS-domain pair
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55074 Adenylyl and guanylyl cyclase catalytic domain
1 1 SCOP 55121 Pseudouridine synthase I TruA
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55209 Enolpyruvate transferase, EPT
1 1 SCOP 55272 DNA repair protein MutS, domain I
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55348 GAPDH-like
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55376 Glucose 6-phosphate dehydrogenase-like
1 1 SCOP 55667 Ribonuclease PH domain 2-like
1 1 SCOP 55817 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 55884 Histidine kinase
1 1 SCOP 55921 Creatinase/aminopeptidase
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56060 ATP-binding domain of peptide synthetases
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56220 DNase I-like
1 1 SCOP 56236 Class II glutamine amidotransferases
1 1 SCOP 56307 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
1 1 SCOP 56421 Peptide deformylase
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56802 Acetyl-CoA synthetase-like
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 58105 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64168 SurE-like
1 1 SCOP 64186 HPr kinase HprK C-terminal domain
1 1 SCOP 64264 Prokaryotic ribosomal protein L17
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 68901 Cytidylytransferase
1 1 SCOP 68924 PEP carboxykinase N-terminal domain
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69766 IpsF-like
1 1 SCOP 69797 Thymidylate synthase-complementing protein Thy1
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75041 SelR domain
1 1 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75626 YebC-like
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82052 Obg GTP-binding protein N-terminal domain
1 1 SCOP 82221 Tp47 lipoprotein, N-terminal domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82661 Poly A polymerase head domain-like
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88746 PFOR Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88771 PFOR PP module
1 1 SCOP 88788 N6 adenine-specific DNA methylase, DAM
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89494 HMGL-like
1 1 SCOP 89508 Glycerophosphoryl diester phosphodiesterase
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101802 Surface presentation of antigens (SPOA)
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102189 AmyC N-terminal domain-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102706 NIF3 (NGG1p interacting factor 3)-like
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 109725 Conserved carboxylase domain
1 1 SCOP 110368 NeuB-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 111332 NAD kinase-like
1 1 SCOP 117144 Flagellar hook protein flgE
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 117984 GGDEF domain
1 1 SCOP 140479 LemA-like
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 142093 ThiI-like
1 1 SCOP 143598 YojJ-like
1 1 SCOP 143632 ApbE-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 143916 RNase Z-like
1 1 SCOP 158833 Tex N-terminal region-like
1 1 SCOP 159112 RNB domain-like
1 1 SCOP 159635 Tex RuvX-like domain-like
1 1 SCOP 159832 PBP transglycosylase domain-like
1 1 SCOP 161094 MgtE membrane domain-like

The following families have one or more weak hits: