Family Assignments

Domains Proteins SCOP Link Families
24 22 SCOP 52686 ABC transporter ATPase domain-like
11 7 SCOP 81268 Tandem AAA-ATPase domain
10 9 SCOP 52592 G proteins
9 9 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
8 8 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
8 6 SCOP 81269 Extended AAA-ATPase domain
6 6 SCOP 53707 Formate dehydrogenase/DMSO reductase, domains 1-3
6 6 SCOP 53851 Phosphate binding protein-like
6 5 SCOP 69361 Cell wall binding repeat
5 5 SCOP 51570 Class I aldolase
5 5 SCOP 52652 Nitrogenase iron protein-like
5 5 SCOP 53272 Phosphoribosyltransferases (PRTases)
4 4 SCOP 51934 Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
4 4 SCOP 52670 RecA protein-like (ATPase-domain)
4 2 SCOP 53068 Actin/HSP70
4 4 SCOP 82550 DegV-like
4 4 SCOP 161071 SNF-like
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 50448 Elongation factors
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 51751 Tyrosine-dependent oxidoreductases
3 3 SCOP 52318 Class I glutamine amidotransferases (GAT)
3 3 SCOP 52541 Nucleotide and nucleoside kinases
3 3 SCOP 53402 Cystathionine synthase-like
3 3 SCOP 53417 GABA-aminotransferase-like
3 3 SCOP 53624 MurCDEF
3 3 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3 3 SCOP 54212 Translational machinery components
3 3 SCOP 55327 PurM N-terminal domain-like
3 3 SCOP 55368 Dihydrodipicolinate reductase-like
3 1 SCOP 55974 S-adenosylmethionine synthetase
3 3 SCOP 56067 BC ATP-binding domain-like
3 3 SCOP 56236 Class II glutamine amidotransferases
3 3 SCOP 56802 Acetyl-CoA synthetase-like
3 3 SCOP 68901 Cytidylytransferase
2 2 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 SCOP 51247 BC C-terminal domain-like
2 2 SCOP 51396 FMN-linked oxidoreductases
2 2 SCOP 51420 Alanine racemase-like, N-terminal domain
2 2 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
2 2 SCOP 52017 LeuD-like
2 2 SCOP 52403 N-type ATP pyrophosphatases
2 2 SCOP 52441 BC N-terminal domain-like
2 1 SCOP 53080 Acetokinase-like
2 1 SCOP 53089 Glycerol kinase
2 2 SCOP 53099 Ribonuclease H
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53168 Purine and uridine phosphorylases
2 2 SCOP 53204 Bacterial dinuclear zinc exopeptidases
2 2 SCOP 53329 Formyltransferase
2 2 SCOP 53620 Thiamin biosynthesis kinases
2 2 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
2 2 SCOP 53672 Aspartate/ornithine carbamoyltransferase
2 2 SCOP 53733 Aconitase iron-sulfur domain
2 1 SCOP 53902 Thiolase-related
2 1 SCOP 54229 Ribonuclease PH domain 1-like
2 2 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55209 Enolpyruvate transferase, EPT
2 2 SCOP 55348 GAPDH-like
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 56043 PurM C-terminal domain-like
2 2 SCOP 56350 Lambda integrase-like, catalytic core
2 2 SCOP 56426 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 1 SCOP 63412 MPP-like
2 2 SCOP 64089 BadF/BadG/BcrA/BcrD-like
2 2 SCOP 74915 V-region of surface antigen I/II (SA I/II, PAC)
2 2 SCOP 75621 Release factor
2 2 SCOP 88724 Pyruvate oxidase and decarboxylase Pyr module
2 2 SCOP 88854 Protein kinases, catalytic subunit
2 1 SCOP 89572 Biotin dependent carboxylase carboxyltransferase domain
2 2 SCOP 103232 Arginine deiminase
2 2 SCOP 118216 Proton glutamate symport protein
2 2 SCOP 142721 PyrH-like
2 2 SCOP 143632 ApbE-like
2 1 SCOP 143860 Polyphosphate kinase C-terminal domain
2 2 SCOP 144028 Nqo4-like
1 1 SCOP 46907 Ribosomal protein L11, C-terminal domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47064 Ribosomal protein S15
1 1 SCOP 47241 Ferritin
1 1 SCOP 47786 NAD+-dependent DNA ligase, domain 3
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48184 Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI)
1 1 SCOP 48257 Citrate synthase
1 1 SCOP 48558 L-aspartase/fumarase
1 1 SCOP 48593 GroEL chaperone, ATPase domain
1 1 SCOP 48711 Di-heme elbow motif
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50250 Anticodon-binding domain
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50495 Prokaryotic proteases
1 1 SCOP 50696 Formate dehydrogenase/DMSO reductase, C-terminal domain
1 1 SCOP 51171 GlmU C-terminal domain-like
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51375 Decarboxylase
1 1 SCOP 51392 Thiamin phosphate synthase
1 1 SCOP 51413 Inosine monophosphate dehydrogenase (IMPDH)
1 1 SCOP 51431 Aldo-keto reductases (NADP)
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51599 Class I DAHP synthetase
1 1 SCOP 51605 Enolase
1 1 SCOP 51609 D-glucarate dehydratase-like
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51718 Dihydropteroate synthetase
1 1 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 52005 Class III anaerobic ribonucleotide reductase NRDD subunit
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52097 Clp protease, ClpP subunit
1 1 SCOP 52100 Tail specific protease, catalytic domain
1 1 SCOP 52103 Crotonase-like
1 1 SCOP 52147 Mug-like
1 1 SCOP 52152 FabD-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52173 CheY-related
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52394 Cytidylyltransferase
1 1 SCOP 52397 Adenylyltransferase
1 1 SCOP 52475 Pyruvate oxidase and decarboxylase, middle domain
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52508 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 SCOP 52513 NagB-like
1 1 SCOP 52901 Glutathione peroxidase-like
1 1 SCOP 52931 Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 52976 Maf-like
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53118 DnaQ-like 3'-5' exonuclease
1 1 SCOP 53134 RuvC resolvase
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53224 Aminoacid dehydrogenases
1 1 SCOP 53245 MurCDEF C-terminal domain
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53324 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 SCOP 53384 AAT-like
1 1 SCOP 53461 UDP-glucose pyrophosphorylase
1 1 SCOP 53591 Nucleoside hydrolase
1 1 SCOP 53614 Ribokinase-like
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53634 Carbamate kinase
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53760 Peptidoglycan biosynthesis glycosyltransferase MurG
1 1 SCOP 53775 Glutaminase/Asparaginase
1 1 SCOP 53791 Tetrapyrrole methylase
1 1 SCOP 53811 TroA-like
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54714 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 SCOP 54737 Ribosomal protein L7/12, C-terminal domain
1 1 SCOP 54748 Ribosomal L11/L12e N-terminal domain
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55041 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55084 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 SCOP 55121 Pseudouridine synthase I TruA
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55201 Translation initiation factor IF3, C-terminal domain
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55914 Amidinotransferase
1 1 SCOP 55932 Glutamine synthetase catalytic domain
1 1 SCOP 56038 B3/B4 domain of PheRS, PheT
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56054 Ribosomal protein L6
1 1 SCOP 56060 ATP-binding domain of peptide synthetases
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56184 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
1 1 SCOP 56195 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 SCOP 56220 DNase I-like
1 1 SCOP 56229 Aldehyde ferredoxin oxidoreductase, N-terminal domain
1 1 SCOP 56323 ADC synthase
1 1 SCOP 56421 Peptide deformylase
1 1 SCOP 56602 beta-Lactamase/D-ala carboxypeptidase
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56732 DNA primase DnaG catalytic core
1 1 SCOP 56763 Nickel-iron hydrogenase, large subunit
1 1 SCOP 56771 Nickel-iron hydrogenase, small subunit
1 1 SCOP 56797 Dehydroquinate synthase, DHQS
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 56822 Hybrid cluster protein (prismane protein)
1 1 SCOP 63379 MarR-like transcriptional regulators
1 1 SCOP 63818 Sortase
1 1 SCOP 63883 MoeA N-terminal region -like
1 1 SCOP 63971 Inosicase
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64183 Manganese-dependent inorganic pyrophosphatase (family II)
1 1 SCOP 64198 AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
1 1 SCOP 64264 Prokaryotic ribosomal protein L17
1 1 SCOP 64380 Dimethylarginine dimethylaminohydrolase DDAH
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 69427 UDP-galactopyranose mutase, N-terminal domain
1 1 SCOP 69501 DTD-like
1 1 SCOP 69670 UDP-galactopyranose mutase
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69766 IpsF-like
1 1 SCOP 69892 Iron-containing alcohol dehydrogenase
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75041 SelR domain
1 1 SCOP 75073 Hydantoinase (dihydropyrimidinase), catalytic domain
1 1 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75323 Exonuclease RecJ
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75626 YebC-like
1 1 SCOP 75648 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 SCOP 81605 PP2C-like
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82052 Obg GTP-binding protein N-terminal domain
1 1 SCOP 82261 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82371 YbeA-like
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 82661 Poly A polymerase head domain-like
1 1 SCOP 82680 N-utilization substance G protein NusG, N-terminal domain
1 1 SCOP 88682 Alanine racemase
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88746 PFOR Pyr module
1 1 SCOP 88749 Pyruvate oxidase and decarboxylase PP module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88771 PFOR PP module
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89156 TorD-like
1 1 SCOP 89494 HMGL-like
1 1 SCOP 89559 NodB-like polysaccharide deacetylase
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 89797 CoA-transferase family III (CaiB/BaiF)
1 1 SCOP 89800 Deoxycytidylate deaminase-like
1 1 SCOP 90087 GlpX-like bacterial fructose-1,6-bisphosphatase
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 100948 Isochorismatase-like hydrolases
1 1 SCOP 101263 Methenyltetrahydrofolate cyclohydrolase-like
1 1 SCOP 101340 HD domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101822 Aminopeptidase/glucanase lid domain
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102646 CoaB-like
1 1 SCOP 102660 PlsX-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 102945 RelA/SpoT domain
1 1 SCOP 103264 Chorismate synthase, AroC
1 1 SCOP 109725 Conserved carboxylase domain
1 1 SCOP 110388 MoCo biosynthesis proteins
1 1 SCOP 111233 YfcE-like
1 1 SCOP 111238 YfiH-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 111332 NAD kinase-like
1 1 SCOP 111338 QueA-like
1 1 SCOP 117362 NanE-like
1 1 SCOP 117449 LamB/YcsF-like
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 140479 LemA-like
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 141524 L,D-transpeptidase catalytic domain-like
1 1 SCOP 141755 PdxS-like
1 1 SCOP 142093 ThiI-like
1 1 SCOP 142339 CofD-like
1 1 SCOP 142434 CinA-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 143921 Pce catalytic domain-like
1 1 SCOP 143976 lvD/EDD N-terminal domain-like
1 1 SCOP 158600 MgsA/YrvN C-terminal domain-like
1 1 SCOP 159249 PH0987 C-terminal domain-like
1 1 SCOP 159444 SP0239-like
1 1 SCOP 159714 Dhaf3308-like
1 1 SCOP 159832 PBP transglycosylase domain-like
1 1 SCOP 160370 Ribosomal protein L10-like
1 1 SCOP 160921 PSTPO5379-like
1 1 SCOP 160984 Diacylglycerol kinase-like
1 1 SCOP 161099 MetI-like

The following families have one or more weak hits: